RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 GCC1Q96CN9 775 aa18.8■□□□□ 0.6
SGCA-204ENST00000504073 PDGFDQ9GZP0 370 aaPredicted RBP18.8■□□□□ 0.6
SGCA-204ENST00000504073 C1orf115Q9H7X2 142 aa18.8■□□□□ 0.6
SGCA-204ENST00000504073 NARFQ9UHQ1 456 aa18.8■□□□□ 0.6
SGCA-204ENST00000504073 ANKRD36CQ5JPF3 1778 aa18.79■□□□□ 0.6
SGCA-204ENST00000504073 CHD4Q14839 1912 aa18.79■□□□□ 0.6
SGCA-204ENST00000504073 ANO8Q9HCE9 1232 aaPredicted RBP18.79■□□□□ 0.6
SGCA-204ENST00000504073 LRRC4BQ9NT99 713 aa18.79■□□□□ 0.6
SGCA-204ENST00000504073 LRRFIP2Q9Y608 721 aaKnown RBP18.79■□□□□ 0.6
SGCA-204ENST00000504073 CAMTA2O94983 1202 aa18.78■□□□□ 0.6
SGCA-204ENST00000504073 CEP85Q6P2H3 762 aa18.78■□□□□ 0.6
SGCA-204ENST00000504073 PPP1R42Q7Z4L9 355 aa18.78■□□□□ 0.6
SGCA-204ENST00000504073 NUP98P52948 1817 aa18.78■□□□□ 0.6
SGCA-204ENST00000504073 ZBTB7AO95365 584 aa18.77■□□□□ 0.6
SGCA-204ENST00000504073 NBPF7P0C2Y1 421 aaPredicted RBP18.77■□□□□ 0.6
SGCA-204ENST00000504073 ATP8B2P98198 1209 aa18.77■□□□□ 0.6
SGCA-204ENST00000504073 UBE3BQ7Z3V4 1068 aa18.77■□□□□ 0.6
SGCA-204ENST00000504073 PCCAP05165 728 aaPredicted RBP18.76■□□□□ 0.59
SGCA-204ENST00000504073 HLFQ16534 295 aa18.76■□□□□ 0.59
SGCA-204ENST00000504073 HSP90AB4PQ58FF6 505 aa18.76■□□□□ 0.59
SGCA-204ENST00000504073 ZBTB38Q8NAP3 1195 aaPredicted RBP18.76■□□□□ 0.59
SGCA-204ENST00000504073 TFCP2L1Q9NZI6 479 aa18.76■□□□□ 0.59
SGCA-204ENST00000504073 BCORQ6W2J9 1755 aa18.76■□□□□ 0.59
SGCA-204ENST00000504073 H7C1W4 665 aa18.75■□□□□ 0.59
SGCA-204ENST00000504073 PHF14O94880 888 aa18.75■□□□□ 0.59
SGCA-204ENST00000504073 GPTP24298 496 aa18.75■□□□□ 0.59
SGCA-204ENST00000504073 PTGER2P43116 358 aa18.75■□□□□ 0.59
SGCA-204ENST00000504073 NLRP10Q86W26 655 aa18.75■□□□□ 0.59
SGCA-204ENST00000504073 ZNF34Q8IZ26 560 aa18.75■□□□□ 0.59
SGCA-204ENST00000504073 NYXQ9GZU5 481 aa18.75■□□□□ 0.59
SGCA-204ENST00000504073 TRMT112Q9UI30 125 aaKnown RBP18.75■□□□□ 0.59
SGCA-204ENST00000504073 NIP7Q9Y221 180 aaKnown RBP eCLIP18.75■□□□□ 0.59
SGCA-204ENST00000504073 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
SGCA-204ENST00000504073 SCN7AQ01118 1682 aa18.74■□□□□ 0.59
SGCA-204ENST00000504073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
SGCA-204ENST00000504073 ARHGEF1Q92888 912 aaKnown RBP18.74■□□□□ 0.59
SGCA-204ENST00000504073 UTP14AQ9BVJ6 771 aaKnown RBP18.74■□□□□ 0.59
SGCA-204ENST00000504073 STK32BQ9NY57 414 aa18.74■□□□□ 0.59
SGCA-204ENST00000504073 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
SGCA-204ENST00000504073 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
SGCA-204ENST00000504073 MTX1Q13505 466 aa18.73■□□□□ 0.59
SGCA-204ENST00000504073 SETDB2Q96T68 719 aa18.73■□□□□ 0.59
SGCA-204ENST00000504073 FHDC1Q9C0D6 1143 aaPredicted RBP18.73■□□□□ 0.59
SGCA-204ENST00000504073 ATF5Q9Y2D1 282 aaPredicted RBP18.73■□□□□ 0.59
SGCA-204ENST00000504073 UBR3Q6ZT12 1888 aa18.72■□□□□ 0.59
SGCA-204ENST00000504073 SRGAP3O43295 1099 aa18.72■□□□□ 0.59
SGCA-204ENST00000504073 IGHDP01880 384 aa18.72■□□□□ 0.59
SGCA-204ENST00000504073 GTF2E1P29083 439 aaPredicted RBP18.72■□□□□ 0.59
SGCA-204ENST00000504073 USPL1Q5W0Q7 1092 aa18.72■□□□□ 0.59
SGCA-204ENST00000504073 SMC5Q8IY18 1101 aa18.72■□□□□ 0.59
SGCA-204ENST00000504073 PROM2Q8N271 834 aa18.72■□□□□ 0.59
SGCA-204ENST00000504073 SUCLG2Q96I99 432 aa18.72■□□□□ 0.59
SGCA-204ENST00000504073 SYT17Q9BSW7 474 aa18.72■□□□□ 0.59
SGCA-204ENST00000504073 SH3TC1Q8TE82 1336 aa18.72■□□□□ 0.59
SGCA-204ENST00000504073 NPHP1O15259 732 aa18.71■□□□□ 0.59
SGCA-204ENST00000504073 SSH3Q8TE77 659 aa18.71■□□□□ 0.59
SGCA-204ENST00000504073 PLA2G12BQ9BX93 195 aa18.7■□□□□ 0.58
SGCA-204ENST00000504073 BICC1Q9H694 974 aaKnown RBP18.7■□□□□ 0.58
SGCA-204ENST00000504073 DCTPP1Q9H773 170 aa18.7■□□□□ 0.58
SGCA-204ENST00000504073 MSH5O43196 834 aa18.69■□□□□ 0.58
SGCA-204ENST00000504073 RAB11FIP3O75154 756 aa18.69■□□□□ 0.58
SGCA-204ENST00000504073 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
SGCA-204ENST00000504073 AKT1S1Q96B36 256 aa18.69■□□□□ 0.58
SGCA-204ENST00000504073 CHMP3Q9Y3E7 222 aa18.69■□□□□ 0.58
SGCA-204ENST00000504073 C4AP0C0L4 1744 aa18.69■□□□□ 0.58
SGCA-204ENST00000504073 IRS4O14654 1257 aaPredicted RBP18.68■□□□□ 0.58
SGCA-204ENST00000504073 PDE8AO60658 829 aa18.68■□□□□ 0.58
SGCA-204ENST00000504073 CASP7P55210 303 aa18.68■□□□□ 0.58
SGCA-204ENST00000504073 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
SGCA-204ENST00000504073 RABL6Q3YEC7 729 aaPredicted RBP18.68■□□□□ 0.58
SGCA-204ENST00000504073 TPTE2Q6XPS3 522 aa18.68■□□□□ 0.58
SGCA-204ENST00000504073 SIRT2Q8IXJ6 389 aa18.68■□□□□ 0.58
SGCA-204ENST00000504073 POLA2Q14181 598 aa18.67■□□□□ 0.58
SGCA-204ENST00000504073 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
SGCA-204ENST00000504073 BICDL1Q6ZP65 573 aa18.67■□□□□ 0.58
SGCA-204ENST00000504073 NBPF5PQ86XG9 351 aaPredicted RBP18.67■□□□□ 0.58
SGCA-204ENST00000504073 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
SGCA-204ENST00000504073 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
SGCA-204ENST00000504073 SRP68Q9UHB9 627 aaKnown RBP18.67■□□□□ 0.58
SGCA-204ENST00000504073 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
SGCA-204ENST00000504073 PNMA6EA0A0J9YXQ4 647 aa18.66■□□□□ 0.58
SGCA-204ENST00000504073 SURF6O75683 361 aaKnown RBP18.66■□□□□ 0.58
SGCA-204ENST00000504073 G3BP1Q13283 466 aaKnown RBP eCLIP18.66■□□□□ 0.58
SGCA-204ENST00000504073 SLC15A2Q16348 729 aa18.66■□□□□ 0.58
SGCA-204ENST00000504073 CCDC57Q2TAC2 916 aa18.66■□□□□ 0.58
SGCA-204ENST00000504073 ANKRD45Q5TZF3 282 aa18.66■□□□□ 0.58
SGCA-204ENST00000504073 SUSD4Q5VX71 490 aa18.66■□□□□ 0.58
SGCA-204ENST00000504073 UBN2Q6ZU65 1347 aa18.66■□□□□ 0.58
SGCA-204ENST00000504073 ZNF827Q17R98 1081 aa18.65■□□□□ 0.58
SGCA-204ENST00000504073 TAF7LQ5H9L4 462 aa18.65■□□□□ 0.58
SGCA-204ENST00000504073 TBC1D9BQ66K14 1250 aa18.65■□□□□ 0.58
SGCA-204ENST00000504073 LMBR1LQ6UX01 489 aa18.65■□□□□ 0.58
SGCA-204ENST00000504073 GOLGB1Q14789 3259 aaKnown RBP18.64■□□□□ 0.57
SGCA-204ENST00000504073 FAM177BA6PVY3 158 aa18.64■□□□□ 0.57
SGCA-204ENST00000504073 NTSR2O95665 410 aa18.64■□□□□ 0.57
SGCA-204ENST00000504073 CTSWP56202 376 aa18.64■□□□□ 0.57
SGCA-204ENST00000504073 NUCB1Q02818 461 aa18.64■□□□□ 0.57
SGCA-204ENST00000504073 CHD1LQ86WJ1 897 aa18.64■□□□□ 0.57
SGCA-204ENST00000504073 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
SGCA-204ENST00000504073 LRRCC1Q9C099 1032 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms