RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 FAM193AP78312 1265 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 CSPP1Q1MSJ5 1256 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 B4GALNT3Q6L9W6 998 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 TRANK1O15050 2925 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 ESPNB1AK53 854 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 GCP02774 474 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 HMGN5P82970 282 aaKnown RBP3.49□□□□□ -1.85
NEDD4-204ENST00000503468 FKBP1CQ5VVH2 108 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 ARHGAP27Q6ZUM4 889 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 PHACTR3Q96KR7 559 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 FUCA2Q9BTY2 467 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 TSPYL1Q9H0U9 437 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 GAKO14976 1311 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 LOC102724159A0A0B4J2E5 919 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 MCM5P33992 734 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 PWP2Q15269 919 aaKnown RBP3.49□□□□□ -1.85
NEDD4-204ENST00000503468 GIMAP6Q6P9H5 292 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 SMAP1Q8IYB5 467 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-204ENST00000503468 USP44Q9H0E7 712 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 SKOR2Q2VWA4 1001 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-204ENST00000503468 CYB5RLQ6IPT4 315 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 DCAF5Q96JK2 942 aa3.49□□□□□ -1.85
NEDD4-204ENST00000503468 COL4A3Q01955 1670 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 IGKV6D-41A0A0C4DH26 115 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 CDK11BP21127 795 aaKnown RBP3.48□□□□□ -1.85
NEDD4-204ENST00000503468 FGD1P98174 961 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 GOLGA6L22H0YM25 854 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 PHKG2P15735 406 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 FUT2Q10981 343 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 AKT1S1Q96B36 256 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 CDK19Q9BWU1 502 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 MAPK8IP3Q9UPT6 1336 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 IGKV5-2P06315 115 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 HOXC8P31273 242 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 UTP14CQ5TAP6 766 aaKnown RBP3.48□□□□□ -1.85
NEDD4-204ENST00000503468 OLIG1Q8TAK6 271 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 INTS4Q96HW7 963 aaKnown RBP3.48□□□□□ -1.85
NEDD4-204ENST00000503468 SLC26A4O43511 780 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 CANXP27824 592 aaKnown RBP3.48□□□□□ -1.85
NEDD4-204ENST00000503468 CCDC96Q2M329 555 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 SAMD1Q6SPF0 538 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-204ENST00000503468 PRAM1Q96QH2 718 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 BCL2L12Q9HB09 334 aa3.48□□□□□ -1.85
NEDD4-204ENST00000503468 TTC41PQ6P2S7 1318 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 SNHG28P0DPA3 235 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 COL11A1P12107 1806 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-204ENST00000503468 PI4K2BQ8TCG2 481 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 CIZ1Q9ULV3 898 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-204ENST00000503468 DDX11L8A8MPP1 907 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 PLA2G6O60733 806 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 TRIM37O94972 964 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 ABTB2Q8N961 1025 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 BRPF3Q9ULD4 1205 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 CLSTN1O94985 981 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 FAM161AQ3B820 660 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 TTLL5Q6EMB2 1281 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 PDCL2Q8N4E4 241 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 SPRYD3Q8NCJ5 442 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 LINS1Q8NG48 757 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 ARID3AQ99856 593 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 DUSP9Q99956 384 aaKnown RBP3.47□□□□□ -1.85
NEDD4-204ENST00000503468 RRP1P56182 461 aaKnown RBP3.47□□□□□ -1.85
NEDD4-204ENST00000503468 EHHADHQ08426 723 aa3.47□□□□□ -1.85
NEDD4-204ENST00000503468 IL6STP40189 918 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-204ENST00000503468 TCEAL1Q15170 157 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 DPY19L2P1Q6NXN4 242 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 CENPQQ7L2Z9 268 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-204ENST00000503468 TCP11L2Q8N4U5 519 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 LTBP2Q14767 1821 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 NBPF26B4DH59 902 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 PMM2O15305 246 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 NUCB1Q02818 461 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 NPY5RQ15761 445 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 NBPF14Q5TI25 921 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 NBPF10Q6P3W6 841 aaKnown RBP3.46□□□□□ -1.86
NEDD4-204ENST00000503468 NBPF15Q8N660 670 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 NENFQ9UMX5 172 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 HDLBPQ00341 1268 aaKnown RBP3.46□□□□□ -1.86
NEDD4-204ENST00000503468 GRIPAP1Q4V328 841 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 ELP1O95163 1332 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 EP400Q96L91 3159 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 PPP4CP60510 307 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 LMOD3Q0VAK6 560 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 GTPBP4Q9BZE4 634 aaKnown RBP3.46□□□□□ -1.86
NEDD4-204ENST00000503468 PATJQ8NI35 1801 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 CCDC66A2RUB6 948 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 KLHDC8BQ8IXV7 354 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 ADAMTS5Q9UNA0 930 aa3.46□□□□□ -1.86
NEDD4-204ENST00000503468 C1RP00736 705 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 ZSCAN30Q86W11 494 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 RGS17Q9UGC6 210 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 SUGT1Q9Y2Z0 365 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 EID1Q9Y6B2 187 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 DYNC1I1O14576 645 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 CHRM1P11229 460 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 HMGA1P17096 107 aaKnown RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 MSNP26038 577 aaKnown RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 GABPAQ06546 454 aa3.45□□□□□ -1.86
NEDD4-204ENST00000503468 MKRN4PQ13434 485 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-204ENST00000503468 SLC15A2Q16348 729 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms