RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 MBIPQ9NS73 344 aa10.64□□□□□ -0.71
NIPBL-203ENST00000503274 MARK1Q9P0L2 795 aa10.64□□□□□ -0.71
NIPBL-203ENST00000503274 ZBTB39O15060 712 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 ICMTO60725 284 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 CD33P20138 364 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 KCNQ4P56696 695 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 CTBSQ01459 385 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 KRT76Q01546 638 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 FAM182BQ5T319 152 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 CNTNAP3BQ96NU0 1288 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 CNTNAP3Q9BZ76 1288 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 KCNH4Q9UQ05 1017 aa10.63□□□□□ -0.71
NIPBL-203ENST00000503274 OPLAHO14841 1288 aa10.62□□□□□ -0.71
NIPBL-203ENST00000503274 FAM13AO94988 1023 aa10.62□□□□□ -0.71
NIPBL-203ENST00000503274 EPB42P16452 691 aa10.62□□□□□ -0.71
NIPBL-203ENST00000503274 NPR3P17342 541 aa10.62□□□□□ -0.71
NIPBL-203ENST00000503274 MPSTP25325 297 aa10.62□□□□□ -0.71
NIPBL-203ENST00000503274 NOM1Q5C9Z4 860 aaKnown RBP10.62□□□□□ -0.71
NIPBL-203ENST00000503274 NSFL1CQ9UNZ2 370 aaKnown RBP10.62□□□□□ -0.71
NIPBL-203ENST00000503274 IVNS1ABPQ9Y6Y0 642 aa10.62□□□□□ -0.71
NIPBL-203ENST00000503274 H3BRB1 525 aa10.61□□□□□ -0.71
NIPBL-203ENST00000503274 ZAP70P43403 619 aa10.61□□□□□ -0.71
NIPBL-203ENST00000503274 TUT1Q9H6E5 874 aaKnown RBP10.61□□□□□ -0.71
NIPBL-203ENST00000503274 BMP4P12644 408 aa10.6□□□□□ -0.71
NIPBL-203ENST00000503274 EIF1AXP47813 144 aaKnown RBP10.6□□□□□ -0.71
NIPBL-203ENST00000503274 ALKBH2Q6NS38 261 aa10.6□□□□□ -0.71
NIPBL-203ENST00000503274 GLYCTKQ8IVS8 523 aa10.6□□□□□ -0.71
NIPBL-203ENST00000503274 FAM13BQ9NYF5 915 aa10.6□□□□□ -0.71
NIPBL-203ENST00000503274 RTCBQ9Y3I0 505 aaKnown RBP10.6□□□□□ -0.71
NIPBL-203ENST00000503274 C2CD2LO14523 706 aa10.59□□□□□ -0.71
NIPBL-203ENST00000503274 SRSF11Q05519 484 aaKnown RBP10.59□□□□□ -0.71
NIPBL-203ENST00000503274 RGL4Q8IZJ4 473 aa10.59□□□□□ -0.71
NIPBL-203ENST00000503274 IGF1RP08069 1367 aa10.58□□□□□ -0.72
NIPBL-203ENST00000503274 SOWAHDA6NJG2 315 aa10.58□□□□□ -0.72
NIPBL-203ENST00000503274 GRNP28799 593 aaKnown RBP10.58□□□□□ -0.72
NIPBL-203ENST00000503274 MAP2K3P46734 347 aa10.58□□□□□ -0.72
NIPBL-203ENST00000503274 GRIN2CQ14957 1233 aa10.58□□□□□ -0.72
NIPBL-203ENST00000503274 ATCAYQ86WG3 371 aa10.58□□□□□ -0.72
NIPBL-203ENST00000503274 PIK3R5Q8WYR1 880 aa10.58□□□□□ -0.72
NIPBL-203ENST00000503274 USP20Q9Y2K6 914 aa10.58□□□□□ -0.72
NIPBL-203ENST00000503274 AAMPQ13685 434 aa10.57□□□□□ -0.72
NIPBL-203ENST00000503274 CMTR1Q8N1G2 835 aaKnown RBP10.57□□□□□ -0.72
NIPBL-203ENST00000503274 GPR152Q8TDT2 470 aa10.57□□□□□ -0.72
NIPBL-203ENST00000503274 C11orf16Q9NQ32 467 aa10.57□□□□□ -0.72
NIPBL-203ENST00000503274 ADAMTS2O95450 1211 aa10.56□□□□□ -0.72
NIPBL-203ENST00000503274 SPEM2Q0P670 501 aa10.56□□□□□ -0.72
NIPBL-203ENST00000503274 ECM1Q16610 540 aa10.56□□□□□ -0.72
NIPBL-203ENST00000503274 SLC30A3Q99726 388 aa10.56□□□□□ -0.72
NIPBL-203ENST00000503274 PRR12Q9ULL5 1215 aa10.56□□□□□ -0.72
NIPBL-203ENST00000503274 DNM1Q05193 864 aaKnown RBP10.54□□□□□ -0.72
NIPBL-203ENST00000503274 CCINQ13939 588 aa10.54□□□□□ -0.72
NIPBL-203ENST00000503274 EDEM1Q92611 657 aa10.54□□□□□ -0.72
NIPBL-203ENST00000503274 GSX2Q9BZM3 304 aa10.54□□□□□ -0.72
NIPBL-203ENST00000503274 KCNMB2Q9Y691 235 aa10.54□□□□□ -0.72
NIPBL-203ENST00000503274 XYLBO75191 536 aa10.53□□□□□ -0.72
NIPBL-203ENST00000503274 EGFRP00533 1210 aa10.53□□□□□ -0.72
NIPBL-203ENST00000503274 SLURP2P0DP57 97 aa10.53□□□□□ -0.72
NIPBL-203ENST00000503274 MZF1P28698 734 aaPredicted RBP10.53□□□□□ -0.72
NIPBL-203ENST00000503274 NEUROD1Q13562 356 aa10.53□□□□□ -0.72
NIPBL-203ENST00000503274 ZNF468Q5VIY5 522 aaPredicted RBP10.53□□□□□ -0.72
NIPBL-203ENST00000503274 EFCC1Q9HA90 598 aa10.53□□□□□ -0.72
NIPBL-203ENST00000503274 AVENQ9NQS1 362 aaPredicted RBP10.53□□□□□ -0.72
NIPBL-203ENST00000503274 ARAFP10398 606 aa10.52□□□□□ -0.73
NIPBL-203ENST00000503274 PCSK2P16519 638 aa10.52□□□□□ -0.73
NIPBL-203ENST00000503274 ARHGAP4P98171 946 aa10.52□□□□□ -0.73
NIPBL-203ENST00000503274 NUDT16Q96DE0 195 aaKnown RBP10.52□□□□□ -0.73
NIPBL-203ENST00000503274 OXCT2Q9BYC2 517 aaPredicted RBP10.52□□□□□ -0.73
NIPBL-203ENST00000503274 BIN2Q9UBW5 565 aaPredicted RBP10.52□□□□□ -0.73
NIPBL-203ENST00000503274 FNDC3AQ9Y2H6 1198 aaKnown RBP10.52□□□□□ -0.73
NIPBL-203ENST00000503274 FZD6O60353 706 aa10.51□□□□□ -0.73
NIPBL-203ENST00000503274 PDGFAP04085 211 aa10.51□□□□□ -0.73
NIPBL-203ENST00000503274 RPLP1P05386 114 aaKnown RBP10.51□□□□□ -0.73
NIPBL-203ENST00000503274 RAB44Q7Z6P3 723 aaPredicted RBP10.51□□□□□ -0.73
NIPBL-203ENST00000503274 BHMTQ93088 406 aa10.51□□□□□ -0.73
NIPBL-203ENST00000503274 PNMA5Q96PV4 448 aa10.51□□□□□ -0.73
NIPBL-203ENST00000503274 UBAP1LF5GYI3 381 aa10.5□□□□□ -0.73
NIPBL-203ENST00000503274 PCBP4P57723 403 aaKnown RBP10.5□□□□□ -0.73
NIPBL-203ENST00000503274 TRIP4Q15650 581 aaPredicted RBP10.5□□□□□ -0.73
NIPBL-203ENST00000503274 SYT9Q86SS6 491 aa10.5□□□□□ -0.73
NIPBL-203ENST00000503274 ACDQ96AP0 544 aa10.5□□□□□ -0.73
NIPBL-203ENST00000503274 CCDC87Q9NVE4 849 aa10.5□□□□□ -0.73
NIPBL-203ENST00000503274 GDF2Q9UK05 429 aaPredicted RBP10.5□□□□□ -0.73
NIPBL-203ENST00000503274 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
NIPBL-203ENST00000503274 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.5□□□□□ -0.73
NIPBL-203ENST00000503274 SASH3O75995 380 aa10.49□□□□□ -0.73
NIPBL-203ENST00000503274 ADH6P28332 368 aa10.49□□□□□ -0.73
NIPBL-203ENST00000503274 KRT25Q7Z3Z0 450 aa10.49□□□□□ -0.73
NIPBL-203ENST00000503274 GOLGA6L1Q8N7Z2 621 aa10.49□□□□□ -0.73
NIPBL-203ENST00000503274 KLF15Q9UIH9 416 aa10.49□□□□□ -0.73
NIPBL-203ENST00000503274 GGA1Q9UJY5 639 aa10.49□□□□□ -0.73
NIPBL-203ENST00000503274 BRPF3Q9ULD4 1205 aa10.49□□□□□ -0.73
NIPBL-203ENST00000503274 SIN3BO75182 1162 aa10.48□□□□□ -0.73
NIPBL-203ENST00000503274 NFKB1P19838 968 aa10.48□□□□□ -0.73
NIPBL-203ENST00000503274 TARSP26639 723 aaKnown RBP10.48□□□□□ -0.73
NIPBL-203ENST00000503274 USP5P45974 858 aa10.48□□□□□ -0.73
NIPBL-203ENST00000503274 TTC16Q8NEE8 873 aa10.48□□□□□ -0.73
NIPBL-203ENST00000503274 NEURL1BA8MQ27 555 aa10.47□□□□□ -0.73
NIPBL-203ENST00000503274 NDUFB5O43674 189 aa10.47□□□□□ -0.73
NIPBL-203ENST00000503274 GGNBP2Q9H3C7 697 aa10.47□□□□□ -0.73
NIPBL-203ENST00000503274 RARAP10276 462 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms