RNA–Protein interactions for RNA: ENST00000502980.1

CLDND1-207, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-207ENST00000502980 SENP3-EIF4A1A0A087X0R7 540 aa22.12■■□□□ 1.13
CLDND1-207ENST00000502980 HSP90B1P14625 803 aaKnown RBP22.12■■□□□ 1.13
CLDND1-207ENST00000502980 NPR1P16066 1061 aa22.12■■□□□ 1.13
CLDND1-207ENST00000502980 C2CD5Q86YS7 1000 aa22.12■■□□□ 1.13
CLDND1-207ENST00000502980 CNKSR1Q969H4 720 aa22.12■■□□□ 1.13
CLDND1-207ENST00000502980 NPHP1O15259 732 aa22.11■■□□□ 1.13
CLDND1-207ENST00000502980 HOXA10P31260 410 aaPredicted RBP22.11■■□□□ 1.13
CLDND1-207ENST00000502980 FLIIQ13045 1269 aa22.11■■□□□ 1.13
CLDND1-207ENST00000502980 ALDH1L2Q3SY69 923 aa22.11■■□□□ 1.13
CLDND1-207ENST00000502980 SH3TC1Q8TE82 1336 aa22.1■■□□□ 1.13
CLDND1-207ENST00000502980 GPTP24298 496 aa22.1■■□□□ 1.13
CLDND1-207ENST00000502980 GTF2E1P29083 439 aaPredicted RBP22.1■■□□□ 1.13
CLDND1-207ENST00000502980 CHRNA5P30532 468 aa22.1■■□□□ 1.13
CLDND1-207ENST00000502980 ADCY9O60503 1353 aa22.1■■□□□ 1.13
CLDND1-207ENST00000502980 ZBED9Q6R2W3 1325 aa22.09■■□□□ 1.13
CLDND1-207ENST00000502980 COL11A2P13942 1736 aaPredicted RBP22.09■■□□□ 1.13
CLDND1-207ENST00000502980 PI4KAP2A4QPH2 592 aa22.08■■□□□ 1.13
CLDND1-207ENST00000502980 ALDH1B1P30837 517 aa22.08■■□□□ 1.13
CLDND1-207ENST00000502980 SOGA3Q5TF21 947 aa22.08■■□□□ 1.13
CLDND1-207ENST00000502980 PI4KAP1Q8N8J0 262 aa22.08■■□□□ 1.13
CLDND1-207ENST00000502980 ABCC12Q96J65 1359 aa22.08■■□□□ 1.12
CLDND1-207ENST00000502980 ERFEQ4G0M1 354 aa22.07■■□□□ 1.12
CLDND1-207ENST00000502980 GRIPAP1Q4V328 841 aa22.07■■□□□ 1.12
CLDND1-207ENST00000502980 ZBTB38Q8NAP3 1195 aaPredicted RBP22.07■■□□□ 1.12
CLDND1-207ENST00000502980 CDCA7LQ96GN5 454 aa22.07■■□□□ 1.12
CLDND1-207ENST00000502980 NLRP3Q96P20 1036 aa22.07■■□□□ 1.12
CLDND1-207ENST00000502980 CRAMP1Q96RY5 1269 aa22.07■■□□□ 1.12
CLDND1-207ENST00000502980 BCS1LQ9Y276 419 aa22.07■■□□□ 1.12
CLDND1-207ENST00000502980 NEXNQ0ZGT2 675 aa22.06■■□□□ 1.12
CLDND1-207ENST00000502980 TRMT112Q9UI30 125 aaKnown RBP22.06■■□□□ 1.12
CLDND1-207ENST00000502980 MAP3K2Q9Y2U5 619 aa22.06■■□□□ 1.12
CLDND1-207ENST00000502980 PTPRCP08575 1304 aa22.06■■□□□ 1.12
CLDND1-207ENST00000502980 PCCAP05165 728 aaPredicted RBP22.05■■□□□ 1.12
CLDND1-207ENST00000502980 G2E3Q7L622 706 aa22.05■■□□□ 1.12
CLDND1-207ENST00000502980 NUTM1Q86Y26 1132 aa22.05■■□□□ 1.12
CLDND1-207ENST00000502980 C7orf43Q8WVR3 580 aa22.05■■□□□ 1.12
CLDND1-207ENST00000502980 CDHR2Q9BYE9 1310 aa22.05■■□□□ 1.12
CLDND1-207ENST00000502980 LTBP3Q9NS15 1303 aa22.05■■□□□ 1.12
CLDND1-207ENST00000502980 SF3B3Q15393 1217 aaKnown RBP22.04■■□□□ 1.12
CLDND1-207ENST00000502980 CC2D2BQ6DHV5 1058 aa22.04■■□□□ 1.12
CLDND1-207ENST00000502980 LINS1Q8NG48 757 aa22.04■■□□□ 1.12
CLDND1-207ENST00000502980 DNAAF4Q8WXU2 420 aa22.04■■□□□ 1.12
CLDND1-207ENST00000502980 CWC25Q9NXE8 425 aaPredicted RBP22.04■■□□□ 1.12
CLDND1-207ENST00000502980 WWC3Q9ULE0 1092 aa22.04■■□□□ 1.12
CLDND1-207ENST00000502980 LAMB2P55268 1798 aa22.03■■□□□ 1.12
CLDND1-207ENST00000502980 IGKV5-2P06315 115 aa22.03■■□□□ 1.12
CLDND1-207ENST00000502980 HNRNPUQ00839 825 aaKnown RBP eCLIP22.03■■□□□ 1.12
CLDND1-207ENST00000502980 FKBP5Q13451 457 aaPredicted RBP22.03■■□□□ 1.12
CLDND1-207ENST00000502980 TNRC6CQ9HCJ0 1690 aaKnown RBP22.03■■□□□ 1.12
CLDND1-207ENST00000502980 MRPL50Q8N5N7 158 aaKnown RBP22.02■■□□□ 1.12
CLDND1-207ENST00000502980 MYD88Q99836 296 aa22.02■■□□□ 1.12
CLDND1-207ENST00000502980 ZC3H4Q9UPT8 1303 aaKnown RBP22.02■■□□□ 1.12
CLDND1-207ENST00000502980 NEURL1BA8MQ27 555 aa22.01■■□□□ 1.11
CLDND1-207ENST00000502980 ATP5J2-PTCD1G3V325 749 aa22.01■■□□□ 1.11
CLDND1-207ENST00000502980 PRPF40BQ6NWY9 871 aaKnown RBP22.01■■□□□ 1.11
CLDND1-207ENST00000502980 TMC4Q7Z404 712 aa22.01■■□□□ 1.11
CLDND1-207ENST00000502980 ZNF622Q969S3 477 aaKnown RBP eCLIP22.01■■□□□ 1.11
CLDND1-207ENST00000502980 FAM177BA6PVY3 158 aa22■■□□□ 1.11
CLDND1-207ENST00000502980 CCDC24Q8N4L8 307 aa22■■□□□ 1.11
CLDND1-207ENST00000502980 RBM17Q96I25 401 aaKnown RBP22■■□□□ 1.11
CLDND1-207ENST00000502980 DDX60Q8IY21 1712 aaKnown RBP22■■□□□ 1.11
CLDND1-207ENST00000502980 SLX4Q8IY92 1834 aa21.99■■□□□ 1.11
CLDND1-207ENST00000502980 FER1L6Q2WGJ9 1857 aa21.99■■□□□ 1.11
CLDND1-207ENST00000502980 H7C1W4 665 aa21.99■■□□□ 1.11
CLDND1-207ENST00000502980 SSH1Q8WYL5 1049 aa21.99■■□□□ 1.11
CLDND1-207ENST00000502980 RPGRQ92834 1020 aaKnown RBP21.99■■□□□ 1.11
CLDND1-207ENST00000502980 PLA2G12BQ9BX93 195 aa21.99■■□□□ 1.11
CLDND1-207ENST00000502980 SNED1Q8TER0 1413 aa21.98■■□□□ 1.11
CLDND1-207ENST00000502980 ALDH1L1O75891 902 aa21.98■■□□□ 1.11
CLDND1-207ENST00000502980 BBOX1O75936 387 aa21.98■■□□□ 1.11
CLDND1-207ENST00000502980 YY1P25490 414 aa21.98■■□□□ 1.11
CLDND1-207ENST00000502980 GCKRQ14397 625 aa21.98■■□□□ 1.11
CLDND1-207ENST00000502980 BEND3Q5T5X7 828 aa21.98■■□□□ 1.11
CLDND1-207ENST00000502980 ARHGAP45Q92619 1136 aa21.98■■□□□ 1.11
CLDND1-207ENST00000502980 IRS4O14654 1257 aaPredicted RBP21.97■■□□□ 1.11
CLDND1-207ENST00000502980 TCERG1O14776 1098 aaKnown RBP21.97■■□□□ 1.11
CLDND1-207ENST00000502980 PDE8AO60658 829 aa21.97■■□□□ 1.11
CLDND1-207ENST00000502980 FAM89AQ96GI7 184 aa21.97■■□□□ 1.11
CLDND1-207ENST00000502980 RTL9Q8NET4 1388 aa21.97■■□□□ 1.11
CLDND1-207ENST00000502980 RTKN2Q8IZC4 609 aa21.96■■□□□ 1.11
CLDND1-207ENST00000502980 SBF1O95248 1867 aa21.95■■□□□ 1.1
CLDND1-207ENST00000502980 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
CLDND1-207ENST00000502980 ARHGAP27Q6ZUM4 889 aa21.95■■□□□ 1.1
CLDND1-207ENST00000502980 VPS33BQ9H267 617 aa21.95■■□□□ 1.1
CLDND1-207ENST00000502980 HCLS1P14317 486 aaPredicted RBP21.94■■□□□ 1.1
CLDND1-207ENST00000502980 CASP7P55210 303 aa21.94■■□□□ 1.1
CLDND1-207ENST00000502980 CCDC93Q567U6 631 aa21.94■■□□□ 1.1
CLDND1-207ENST00000502980 C3orf67Q6ZVT6 689 aa21.94■■□□□ 1.1
CLDND1-207ENST00000502980 SYNE4Q8N205 404 aa21.94■■□□□ 1.1
CLDND1-207ENST00000502980 PSMD1Q99460 953 aa21.94■■□□□ 1.1
CLDND1-207ENST00000502980 UTYO14607 1347 aa21.93■■□□□ 1.1
CLDND1-207ENST00000502980 GRAPQ13588 217 aa21.93■■□□□ 1.1
CLDND1-207ENST00000502980 DDX46Q7L014 1031 aaKnown RBP21.93■■□□□ 1.1
CLDND1-207ENST00000502980 GRAPLQ8TC17 118 aaPredicted RBP21.93■■□□□ 1.1
CLDND1-207ENST00000502980 KIF16BQ96L93 1317 aa21.93■■□□□ 1.1
CLDND1-207ENST00000502980 NFKBIEO00221 500 aa21.92■■□□□ 1.1
CLDND1-207ENST00000502980 C21orf2O43822 256 aa21.92■■□□□ 1.1
CLDND1-207ENST00000502980 LMNB1P20700 586 aa21.92■■□□□ 1.1
CLDND1-207ENST00000502980 CWF19L2Q2TBE0 894 aaKnown RBP21.92■■□□□ 1.1
CLDND1-207ENST00000502980 ATP6V0A2Q9Y487 856 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms