RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CCDC191Q8NCU4 936 aa13.73□□□□□ -0.21
UBE2D3-212ENST00000502563 METTL22Q9BUU2 404 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-212ENST00000502563 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
UBE2D3-212ENST00000502563 ADCY9O60503 1353 aa13.72□□□□□ -0.21
UBE2D3-212ENST00000502563 PTPRCP08575 1304 aa13.72□□□□□ -0.21
UBE2D3-212ENST00000502563 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
UBE2D3-212ENST00000502563 GRIN3BO60391 1043 aa13.71□□□□□ -0.21
UBE2D3-212ENST00000502563 HSP90B1P14625 803 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-212ENST00000502563 SUSD4Q5VX71 490 aa13.71□□□□□ -0.21
UBE2D3-212ENST00000502563 UTP14AQ9BVJ6 771 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-212ENST00000502563 ARFGEF1Q9Y6D6 1849 aa13.71□□□□□ -0.22
UBE2D3-212ENST00000502563 SH3TC1Q8TE82 1336 aa13.7□□□□□ -0.22
UBE2D3-212ENST00000502563 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
UBE2D3-212ENST00000502563 H0YIN7 160 aa13.7□□□□□ -0.22
UBE2D3-212ENST00000502563 STYK1Q6J9G0 422 aa13.7□□□□□ -0.22
UBE2D3-212ENST00000502563 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
UBE2D3-212ENST00000502563 PIM2Q9P1W9 311 aa13.7□□□□□ -0.22
UBE2D3-212ENST00000502563 N4BP2Q86UW6 1770 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 SRGNP10124 158 aa13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 DPEP1P16444 411 aa13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 NEXNQ0ZGT2 675 aa13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 FKBP5Q13451 457 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 G2E3Q7L622 706 aa13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 MRPL50Q8N5N7 158 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 ZBTB38Q8NAP3 1195 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 LINS1Q8NG48 757 aa13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 MASTLQ96GX5 879 aa13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
UBE2D3-212ENST00000502563 GOLGB1Q14789 3259 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 LAMB2P55268 1798 aa13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 UTRNP46939 3433 aa13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 NPHP1O15259 732 aa13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 GPTP24298 496 aa13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 HOXA10P31260 410 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 KLHL34Q8N239 644 aa13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 SSH1Q8WYL5 1049 aa13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 ABCC12Q96J65 1359 aa13.68□□□□□ -0.22
UBE2D3-212ENST00000502563 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-212ENST00000502563 KIF16BQ96L93 1317 aa13.67□□□□□ -0.22
UBE2D3-212ENST00000502563 CDHR2Q9BYE9 1310 aa13.67□□□□□ -0.22
UBE2D3-212ENST00000502563 PCCAP05165 728 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-212ENST00000502563 NPR1P16066 1061 aa13.67□□□□□ -0.22
UBE2D3-212ENST00000502563 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-212ENST00000502563 CWC25Q9NXE8 425 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-212ENST00000502563 TRMT112Q9UI30 125 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-212ENST00000502563 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 IGKV5-2P06315 115 aa13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 RARSP54136 660 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 DALRD3Q5D0E6 543 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 TTLL6Q8N841 843 aa13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 TNRC6CQ9HCJ0 1690 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-212ENST00000502563 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 ALDH1L1O75891 902 aa13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 YBX3P16989 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 GPR162Q16538 588 aa13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 GRIPAP1Q4V328 841 aa13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 BEND3Q5T5X7 828 aa13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 CRAMP1Q96RY5 1269 aa13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 MYD88Q99836 296 aa13.65□□□□□ -0.22
UBE2D3-212ENST00000502563 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-212ENST00000502563 CHRNA5P30532 468 aa13.64□□□□□ -0.23
UBE2D3-212ENST00000502563 GCKRQ14397 625 aa13.64□□□□□ -0.23
UBE2D3-212ENST00000502563 NUTM1Q86Y26 1132 aa13.64□□□□□ -0.23
UBE2D3-212ENST00000502563 PLA2G12BQ9BX93 195 aa13.64□□□□□ -0.23
UBE2D3-212ENST00000502563 SMC4Q9NTJ3 1288 aa13.64□□□□□ -0.23
UBE2D3-212ENST00000502563 RTL9Q8NET4 1388 aa13.63□□□□□ -0.23
UBE2D3-212ENST00000502563 ATP5J2-PTCD1G3V325 749 aa13.63□□□□□ -0.23
UBE2D3-212ENST00000502563 H7C1W4 665 aa13.63□□□□□ -0.23
UBE2D3-212ENST00000502563 TCERG1O14776 1098 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-212ENST00000502563 CC2D2BQ6DHV5 1058 aa13.63□□□□□ -0.23
UBE2D3-212ENST00000502563 TMC4Q7Z404 712 aa13.63□□□□□ -0.23
UBE2D3-212ENST00000502563 UTYO14607 1347 aa13.63□□□□□ -0.23
UBE2D3-212ENST00000502563 LTBP3Q9NS15 1303 aa13.63□□□□□ -0.23
UBE2D3-212ENST00000502563 CHD4Q14839 1912 aa13.62□□□□□ -0.23
UBE2D3-212ENST00000502563 C7orf43Q8WVR3 580 aa13.62□□□□□ -0.23
UBE2D3-212ENST00000502563 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-212ENST00000502563 BCS1LQ9Y276 419 aa13.62□□□□□ -0.23
UBE2D3-212ENST00000502563 SNED1Q8TER0 1413 aa13.62□□□□□ -0.23
UBE2D3-212ENST00000502563 IRS4O14654 1257 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-212ENST00000502563 IPO8O15397 1037 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-212ENST00000502563 PDE8AO60658 829 aa13.61□□□□□ -0.23
UBE2D3-212ENST00000502563 CASP7P55210 303 aa13.61□□□□□ -0.23
UBE2D3-212ENST00000502563 RPGRQ92834 1020 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-212ENST00000502563 FAM89AQ96GI7 184 aa13.61□□□□□ -0.23
UBE2D3-212ENST00000502563 RBM17Q96I25 401 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-212ENST00000502563 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
UBE2D3-212ENST00000502563 FAM177BA6PVY3 158 aa13.6□□□□□ -0.23
UBE2D3-212ENST00000502563 BBOX1O75936 387 aa13.6□□□□□ -0.23
UBE2D3-212ENST00000502563 CWF19L2Q2TBE0 894 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-212ENST00000502563 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-212ENST00000502563 ZC3H4Q9UPT8 1303 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms