RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 DPY19L2Q6NUT2 758 aa18.54■□□□□ 0.56
CLDND1-206ENST00000502299 TPTE2Q6XPS3 522 aa18.54■□□□□ 0.56
CLDND1-206ENST00000502299 BCORQ6W2J9 1755 aa18.54■□□□□ 0.56
CLDND1-206ENST00000502299 ZNF521Q96K83 1311 aa18.53■□□□□ 0.56
CLDND1-206ENST00000502299 NBPF5PQ86XG9 351 aaPredicted RBP18.53■□□□□ 0.56
CLDND1-206ENST00000502299 CNBD1Q8NA66 436 aa18.53■□□□□ 0.56
CLDND1-206ENST00000502299 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
CLDND1-206ENST00000502299 LTBP3Q9NS15 1303 aa18.52■□□□□ 0.56
CLDND1-206ENST00000502299 COL11A2P13942 1736 aaPredicted RBP18.52■□□□□ 0.56
CLDND1-206ENST00000502299 SRGNP10124 158 aa18.52■□□□□ 0.56
CLDND1-206ENST00000502299 ST5P78524 1137 aa18.52■□□□□ 0.56
CLDND1-206ENST00000502299 HSP90AB3PQ58FF7 597 aa18.52■□□□□ 0.56
CLDND1-206ENST00000502299 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
CLDND1-206ENST00000502299 TAOK3Q9H2K8 898 aa18.52■□□□□ 0.56
CLDND1-206ENST00000502299 POTEIP0CG38 1075 aa18.51■□□□□ 0.55
CLDND1-206ENST00000502299 POTEJP0CG39 1038 aa18.51■□□□□ 0.55
CLDND1-206ENST00000502299 EXOSC9Q06265 439 aaKnown RBP18.51■□□□□ 0.55
CLDND1-206ENST00000502299 PRPF40BQ6NWY9 871 aaKnown RBP18.51■□□□□ 0.55
CLDND1-206ENST00000502299 ZNF34Q8IZ26 560 aa18.51■□□□□ 0.55
CLDND1-206ENST00000502299 PLBD2Q8NHP8 589 aa18.51■□□□□ 0.55
CLDND1-206ENST00000502299 STK31Q9BXU1 1019 aa18.51■□□□□ 0.55
CLDND1-206ENST00000502299 VAMP4O75379 141 aa18.5■□□□□ 0.55
CLDND1-206ENST00000502299 CAPN15O75808 1086 aa18.5■□□□□ 0.55
CLDND1-206ENST00000502299 DDNO94850 711 aaPredicted RBP18.5■□□□□ 0.55
CLDND1-206ENST00000502299 HSPA1AP0DMV8 641 aaKnown RBP18.5■□□□□ 0.55
CLDND1-206ENST00000502299 HSPA1BP0DMV9 641 aaKnown RBP18.5■□□□□ 0.55
CLDND1-206ENST00000502299 GTF2E1P29083 439 aaPredicted RBP18.5■□□□□ 0.55
CLDND1-206ENST00000502299 STYK1Q6J9G0 422 aa18.5■□□□□ 0.55
CLDND1-206ENST00000502299 TNS4Q8IZW8 715 aa18.5■□□□□ 0.55
CLDND1-206ENST00000502299 CNKSR1Q969H4 720 aa18.5■□□□□ 0.55
CLDND1-206ENST00000502299 NYXQ9GZU5 481 aa18.5■□□□□ 0.55
CLDND1-206ENST00000502299 CCDC88AQ3V6T2 1871 aa18.5■□□□□ 0.55
CLDND1-206ENST00000502299 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
CLDND1-206ENST00000502299 GPTP24298 496 aa18.49■□□□□ 0.55
CLDND1-206ENST00000502299 PARP10Q53GL7 1025 aa18.49■□□□□ 0.55
CLDND1-206ENST00000502299 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
CLDND1-206ENST00000502299 FER1L6Q2WGJ9 1857 aa18.49■□□□□ 0.55
CLDND1-206ENST00000502299 E9PSI1 815 aa18.48■□□□□ 0.55
CLDND1-206ENST00000502299 TCIRG1Q13488 830 aa18.48■□□□□ 0.55
CLDND1-206ENST00000502299 PPP1R42Q7Z4L9 355 aa18.48■□□□□ 0.55
CLDND1-206ENST00000502299 C7orf43Q8WVR3 580 aa18.48■□□□□ 0.55
CLDND1-206ENST00000502299 MASTLQ96GX5 879 aa18.48■□□□□ 0.55
CLDND1-206ENST00000502299 NUP98P52948 1817 aa18.47■□□□□ 0.55
CLDND1-206ENST00000502299 SLC4A2P04920 1241 aa18.47■□□□□ 0.55
CLDND1-206ENST00000502299 SUSD4Q5VX71 490 aa18.47■□□□□ 0.55
CLDND1-206ENST00000502299 CHADLQ6NUI6 762 aa18.47■□□□□ 0.55
CLDND1-206ENST00000502299 RIC3Q7Z5B4 369 aa18.47■□□□□ 0.55
CLDND1-206ENST00000502299 SLX4Q8IY92 1834 aa18.46■□□□□ 0.55
CLDND1-206ENST00000502299 DDX58O95786 925 aaKnown RBP18.46■□□□□ 0.55
CLDND1-206ENST00000502299 SLFN5Q08AF3 891 aa18.46■□□□□ 0.55
CLDND1-206ENST00000502299 UBN2Q6ZU65 1347 aa18.46■□□□□ 0.55
CLDND1-206ENST00000502299 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
CLDND1-206ENST00000502299 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
CLDND1-206ENST00000502299 KLRG2A4D1S0 409 aaPredicted RBP18.44■□□□□ 0.54
CLDND1-206ENST00000502299 SOGA3Q5TF21 947 aa18.44■□□□□ 0.54
CLDND1-206ENST00000502299 UTP14AQ9BVJ6 771 aaKnown RBP18.44■□□□□ 0.54
CLDND1-206ENST00000502299 MKRN1Q9UHC7 482 aaKnown RBP18.44■□□□□ 0.54
CLDND1-206ENST00000502299 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
CLDND1-206ENST00000502299 DICER1Q9UPY3 1922 aaKnown RBP18.43■□□□□ 0.54
CLDND1-206ENST00000502299 OLFM4Q6UX06 510 aa18.43■□□□□ 0.54
CLDND1-206ENST00000502299 NLRP10Q86W26 655 aa18.43■□□□□ 0.54
CLDND1-206ENST00000502299 NUTM1Q86Y26 1132 aa18.43■□□□□ 0.54
CLDND1-206ENST00000502299 NTSR2O95665 410 aa18.42■□□□□ 0.54
CLDND1-206ENST00000502299 NPR1P16066 1061 aa18.42■□□□□ 0.54
CLDND1-206ENST00000502299 TRIM28Q13263 835 aaKnown RBP18.42■□□□□ 0.54
CLDND1-206ENST00000502299 KSR2Q6VAB6 950 aa18.42■□□□□ 0.54
CLDND1-206ENST00000502299 CDCA7LQ96GN5 454 aa18.42■□□□□ 0.54
CLDND1-206ENST00000502299 L3MBTL3Q96JM7 780 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-206ENST00000502299 ISCA1Q9BUE6 129 aa18.42■□□□□ 0.54
CLDND1-206ENST00000502299 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
CLDND1-206ENST00000502299 PASKQ96RG2 1323 aa18.42■□□□□ 0.54
CLDND1-206ENST00000502299 CCDC93Q567U6 631 aa18.41■□□□□ 0.54
CLDND1-206ENST00000502299 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
CLDND1-206ENST00000502299 TAF1DQ9H5J8 278 aaPredicted RBP18.41■□□□□ 0.54
CLDND1-206ENST00000502299 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
CLDND1-206ENST00000502299 ATP5J2-PTCD1G3V325 749 aa18.4■□□□□ 0.54
CLDND1-206ENST00000502299 G2E3Q7L622 706 aa18.4■□□□□ 0.54
CLDND1-206ENST00000502299 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
CLDND1-206ENST00000502299 METTL22Q9BUU2 404 aaPredicted RBP18.4■□□□□ 0.54
CLDND1-206ENST00000502299 ZNF277Q9NRM2 450 aaPredicted RBP18.4■□□□□ 0.54
CLDND1-206ENST00000502299 TRMT112Q9UI30 125 aaKnown RBP18.4■□□□□ 0.54
CLDND1-206ENST00000502299 ZNF541Q9H0D2 1346 aa18.4■□□□□ 0.54
CLDND1-206ENST00000502299 PI4KAP2A4QPH2 592 aa18.39■□□□□ 0.53
CLDND1-206ENST00000502299 FKBP4Q02790 459 aaKnown RBP eCLIP18.39■□□□□ 0.53
CLDND1-206ENST00000502299 FLIIQ13045 1269 aa18.39■□□□□ 0.53
CLDND1-206ENST00000502299 LDHDQ86WU2 507 aa18.39■□□□□ 0.53
CLDND1-206ENST00000502299 PI4KAP1Q8N8J0 262 aa18.39■□□□□ 0.53
CLDND1-206ENST00000502299 NLRP3Q96P20 1036 aa18.39■□□□□ 0.53
CLDND1-206ENST00000502299 MYD88Q99836 296 aa18.39■□□□□ 0.53
CLDND1-206ENST00000502299 MAP3K2Q9Y2U5 619 aa18.39■□□□□ 0.53
CLDND1-206ENST00000502299 ARFGEF2Q9Y6D5 1785 aa18.38■□□□□ 0.53
CLDND1-206ENST00000502299 ITGBL1O95965 494 aaPredicted RBP18.38■□□□□ 0.53
CLDND1-206ENST00000502299 HNRNPUQ00839 825 aaKnown RBP eCLIP18.38■□□□□ 0.53
CLDND1-206ENST00000502299 SH3TC1Q8TE82 1336 aa18.38■□□□□ 0.53
CLDND1-206ENST00000502299 CNTNAP1P78357 1384 aa18.38■□□□□ 0.53
CLDND1-206ENST00000502299 ALDH1B1P30837 517 aa18.37■□□□□ 0.53
CLDND1-206ENST00000502299 NEXNQ0ZGT2 675 aa18.37■□□□□ 0.53
CLDND1-206ENST00000502299 FKBP5Q13451 457 aaPredicted RBP18.37■□□□□ 0.53
CLDND1-206ENST00000502299 CCDC191Q8NCU4 936 aa18.37■□□□□ 0.53
CLDND1-206ENST00000502299 ZNF428Q96B54 188 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms