RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 RBM5P52756 815 aaKnown RBP eCLIP12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 CCDC38Q502W7 563 aa12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 ERCC3P19447 782 aa12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 CALML4Q96GE6 196 aa12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 INTS8Q75QN2 995 aaKnown RBP12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 DACT3Q96B18 629 aaPredicted RBP12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 CTAGE1Q96RT6 745 aa12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 TCP11L1Q9NUJ3 509 aa12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 MTRF1LQ9UGC7 380 aaKnown RBP12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 RASSF2P50749 326 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 GEN1Q17RS7 908 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 MTIF2P46199 727 aaKnown RBP12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 SNW1Q13573 536 aaKnown RBP12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 GPR161Q8N6U8 529 aaKnown RBP12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 CSRNP2Q9H175 543 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 TRAF1Q13077 416 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 CLUL1Q15846 466 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 CETN3O15182 167 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 SYF2O95926 243 aaKnown RBP12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 CYLC1P35663 651 aaPredicted RBP12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 SLC4A8Q2Y0W8 1093 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 FYB2Q5VWT5 728 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 MICALL1Q8N3F8 863 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 POLE3Q9NRF9 147 aa12.75□□□□□ -0.37
AC055713.1-201ENST00000498967 CROCCP2Q86T23 111 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 BICD1Q96G01 975 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 THEGQ9P2T0 379 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 FAM169AQ9Y6X4 670 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 SYCP3Q8IZU3 236 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 CCDC94Q9BW85 323 aaPredicted RBP12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 IMPG2Q9BZV3 1241 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 UBA5Q9GZZ9 404 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 EIF3DO15371 548 aaKnown RBP eCLIP12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 C16orf45Q96MC5 204 aaPredicted RBP12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 RAP1GDS1P52306 607 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 CCDC62Q6P9F0 684 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 ZNF354CQ86Y25 554 aa12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 GIGYF1O75420 1035 aaPredicted RBP12.74□□□□□ -0.37
AC055713.1-201ENST00000498967 CCT4P50991 539 aaKnown RBP12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 INF2Q27J81 1249 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 MUM1L1Q5H9M0 696 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 NKIRAS1Q9NYS0 192 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 ANKFY1Q9P2R3 1169 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 FGD6Q6ZV73 1430 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 RSPH14Q9UHP6 348 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 NCBP1Q09161 790 aaKnown RBP12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 SLF2Q8IX21 1173 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 USP5P45974 858 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 ATP2A3Q93084 1043 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 CTAGE9A4FU28 777 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 CAPN2P17655 700 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
AC055713.1-201ENST00000498967 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 PPP4R3BQ5MIZ7 849 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 WDR78Q5VTH9 848 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 FAN1Q9Y2M0 1017 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 VAV2P52735 878 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 GSTA5Q7RTV2 222 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 PDCD7Q8N8D1 485 aaKnown RBP12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 CTCFLQ8NI51 663 aaPredicted RBP12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 HAUS7Q99871 368 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 GAS2L2Q8NHY3 880 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 Q9H521 79 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 RMND1Q9NWS8 449 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 APAF1O14727 1248 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 ARMC9Q7Z3E5 817 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 SH2B1Q9NRF2 756 aaPredicted RBP12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 PUF60Q9UHX1 559 aaKnown RBP12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 RILPL1Q5EBL4 403 aa12.72□□□□□ -0.37
AC055713.1-201ENST00000498967 CCDC40Q4G0X9 1142 aa12.71□□□□□ -0.37
AC055713.1-201ENST00000498967 NUTM2DQ5VT03 806 aaPredicted RBP12.71□□□□□ -0.37
AC055713.1-201ENST00000498967 TCERG1LQ5VWI1 586 aa12.71□□□□□ -0.37
AC055713.1-201ENST00000498967 STX1AQ16623 288 aa12.71□□□□□ -0.37
AC055713.1-201ENST00000498967 CEP85LQ5SZL2 805 aa12.71□□□□□ -0.37
AC055713.1-201ENST00000498967 ATF7IPQ6VMQ6 1270 aa12.71□□□□□ -0.37
AC055713.1-201ENST00000498967 IQCA1Q86XH1 822 aa12.71□□□□□ -0.37
AC055713.1-201ENST00000498967 RASSF4Q9H2L5 321 aa12.71□□□□□ -0.37
AC055713.1-201ENST00000498967 DNA2P51530 1060 aa12.71□□□□□ -0.37
AC055713.1-201ENST00000498967 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.38
AC055713.1-201ENST00000498967 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.38
AC055713.1-201ENST00000498967 PPP1R12CQ9BZL4 782 aa12.71□□□□□ -0.38
AC055713.1-201ENST00000498967 HSP90AA5PQ58FG0 334 aa12.71□□□□□ -0.38
AC055713.1-201ENST00000498967 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.38
AC055713.1-201ENST00000498967 A0A1B0GUL7 405 aa12.7□□□□□ -0.38
AC055713.1-201ENST00000498967 AKR1B10O60218 316 aa12.7□□□□□ -0.38
AC055713.1-201ENST00000498967 CNNM3Q8NE01 707 aa12.7□□□□□ -0.38
AC055713.1-201ENST00000498967 MCUR1Q96AQ8 359 aa12.7□□□□□ -0.38
AC055713.1-201ENST00000498967 RPGRIP1Q96KN7 1286 aa12.7□□□□□ -0.38
AC055713.1-201ENST00000498967 HSPA1LP34931 641 aa12.7□□□□□ -0.38
AC055713.1-201ENST00000498967 XAB2Q9HCS7 855 aaKnown RBP12.7□□□□□ -0.38
AC055713.1-201ENST00000498967 PDRG1Q9NUG6 133 aa12.7□□□□□ -0.38
AC055713.1-201ENST00000498967 DDX19AQ9NUU7 478 aaKnown RBP12.7□□□□□ -0.38
AC055713.1-201ENST00000498967 CTAGE15A4D2H0 777 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms