RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
HMGCL-207ENST00000498698 HSP90AB3PQ58FF7 597 aa12.31□□□□□ -0.44
HMGCL-207ENST00000498698 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
HMGCL-207ENST00000498698 NLRP10Q86W26 655 aa12.31□□□□□ -0.44
HMGCL-207ENST00000498698 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-207ENST00000498698 RTKN2Q8IZC4 609 aa12.31□□□□□ -0.44
HMGCL-207ENST00000498698 CRAMP1Q96RY5 1269 aa12.31□□□□□ -0.44
HMGCL-207ENST00000498698 COL11A2P13942 1736 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-207ENST00000498698 FSTL1Q12841 308 aa12.3□□□□□ -0.44
HMGCL-207ENST00000498698 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
HMGCL-207ENST00000498698 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
HMGCL-207ENST00000498698 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
HMGCL-207ENST00000498698 HYPKQ9NX55 129 aa12.3□□□□□ -0.44
HMGCL-207ENST00000498698 RNF123Q5XPI4 1314 aa12.3□□□□□ -0.44
HMGCL-207ENST00000498698 ELL2O00472 640 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-207ENST00000498698 ANP32CO43423 234 aa12.29□□□□□ -0.44
HMGCL-207ENST00000498698 CC2D2BQ6DHV5 1058 aa12.29□□□□□ -0.44
HMGCL-207ENST00000498698 SYNE4Q8N205 404 aa12.29□□□□□ -0.44
HMGCL-207ENST00000498698 C8orf58Q8NAV2 365 aa12.29□□□□□ -0.44
HMGCL-207ENST00000498698 RBM17Q96I25 401 aaKnown RBP12.29□□□□□ -0.44
HMGCL-207ENST00000498698 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
HMGCL-207ENST00000498698 ZNF277Q9NRM2 450 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-207ENST00000498698 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
HMGCL-207ENST00000498698 SLX4Q8IY92 1834 aa12.28□□□□□ -0.44
HMGCL-207ENST00000498698 DDNO94850 711 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-207ENST00000498698 HCLS1P14317 486 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-207ENST00000498698 CCDC27Q2M243 656 aa12.28□□□□□ -0.44
HMGCL-207ENST00000498698 WWC1Q8IX03 1113 aa12.28□□□□□ -0.44
HMGCL-207ENST00000498698 PSMD1Q99460 953 aa12.28□□□□□ -0.44
HMGCL-207ENST00000498698 ISCA1Q9BUE6 129 aa12.28□□□□□ -0.44
HMGCL-207ENST00000498698 MRS2Q9HD23 443 aa12.28□□□□□ -0.44
HMGCL-207ENST00000498698 TRMT112Q9UI30 125 aaKnown RBP12.28□□□□□ -0.44
HMGCL-207ENST00000498698 APLP1P51693 650 aa12.27□□□□□ -0.45
HMGCL-207ENST00000498698 TRIM28Q13263 835 aaKnown RBP12.27□□□□□ -0.45
HMGCL-207ENST00000498698 NCBP3Q53F19 620 aaKnown RBP12.27□□□□□ -0.45
HMGCL-207ENST00000498698 SLC51AQ86UW1 340 aa12.27□□□□□ -0.45
HMGCL-207ENST00000498698 SMC1BQ8NDV3 1235 aa12.27□□□□□ -0.45
HMGCL-207ENST00000498698 SH3TC1Q8TE82 1336 aa12.27□□□□□ -0.45
HMGCL-207ENST00000498698 ATP5J2-PTCD1G3V325 749 aa12.26□□□□□ -0.45
HMGCL-207ENST00000498698 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-207ENST00000498698 IARSP41252 1262 aaKnown RBP12.26□□□□□ -0.45
HMGCL-207ENST00000498698 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
HMGCL-207ENST00000498698 TSPYL6Q8N831 410 aa12.26□□□□□ -0.45
HMGCL-207ENST00000498698 PHAXQ9H814 394 aaKnown RBP12.26□□□□□ -0.45
HMGCL-207ENST00000498698 SBF1O95248 1867 aa12.25□□□□□ -0.45
HMGCL-207ENST00000498698 FZD9O00144 591 aa12.25□□□□□ -0.45
HMGCL-207ENST00000498698 TCERG1O14776 1098 aaKnown RBP12.25□□□□□ -0.45
HMGCL-207ENST00000498698 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
HMGCL-207ENST00000498698 TSR2Q969E8 191 aaKnown RBP12.25□□□□□ -0.45
HMGCL-207ENST00000498698 ZNF428Q96B54 188 aa12.25□□□□□ -0.45
HMGCL-207ENST00000498698 L3MBTL3Q96JM7 780 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-207ENST00000498698 ATP6V0A2Q9Y487 856 aa12.25□□□□□ -0.45
HMGCL-207ENST00000498698 TNRC6CQ9HCJ0 1690 aaKnown RBP12.25□□□□□ -0.45
HMGCL-207ENST00000498698 CEP350Q5VT06 3117 aa12.24□□□□□ -0.45
HMGCL-207ENST00000498698 ABCC4O15439 1325 aa12.24□□□□□ -0.45
HMGCL-207ENST00000498698 BBOX1O75936 387 aa12.24□□□□□ -0.45
HMGCL-207ENST00000498698 IL16Q14005 1332 aa12.24□□□□□ -0.45
HMGCL-207ENST00000498698 CCDC30Q5VVM6 783 aa12.24□□□□□ -0.45
HMGCL-207ENST00000498698 RIC3Q7Z5B4 369 aa12.24□□□□□ -0.45
HMGCL-207ENST00000498698 FAM89AQ96GI7 184 aa12.24□□□□□ -0.45
HMGCL-207ENST00000498698 CHMP4AQ9BY43 222 aa12.24□□□□□ -0.45
HMGCL-207ENST00000498698 ZNF541Q9H0D2 1346 aa12.24□□□□□ -0.45
HMGCL-207ENST00000498698 FER1L6Q2WGJ9 1857 aa12.23□□□□□ -0.45
HMGCL-207ENST00000498698 GOLGA2Q08379 1002 aa12.23□□□□□ -0.45
HMGCL-207ENST00000498698 DDX46Q7L014 1031 aaKnown RBP12.23□□□□□ -0.45
HMGCL-207ENST00000498698 NUP98P52948 1817 aa12.23□□□□□ -0.45
HMGCL-207ENST00000498698 IQCA1LA6NCM1 817 aa12.22□□□□□ -0.45
HMGCL-207ENST00000498698 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
HMGCL-207ENST00000498698 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
HMGCL-207ENST00000498698 HTRA3P83110 453 aa12.22□□□□□ -0.45
HMGCL-207ENST00000498698 SF3B3Q15393 1217 aaKnown RBP12.22□□□□□ -0.45
HMGCL-207ENST00000498698 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
HMGCL-207ENST00000498698 JDP2Q8WYK2 163 aa12.22□□□□□ -0.45
HMGCL-207ENST00000498698 GRAPQ13588 217 aa12.21□□□□□ -0.45
HMGCL-207ENST00000498698 RTL5Q5HYW3 569 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-207ENST00000498698 WDR63Q8IWG1 891 aa12.21□□□□□ -0.45
HMGCL-207ENST00000498698 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.45
HMGCL-207ENST00000498698 ZBTB38Q8NAP3 1195 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-207ENST00000498698 GRAPLQ8TC17 118 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-207ENST00000498698 MYD88Q99836 296 aa12.21□□□□□ -0.45
HMGCL-207ENST00000498698 RTFDC1Q9BY42 306 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-207ENST00000498698 TMX4Q9H1E5 349 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-207ENST00000498698 VPS33BQ9H267 617 aa12.21□□□□□ -0.45
HMGCL-207ENST00000498698 TAF1DQ9H5J8 278 aaPredicted RBP12.21□□□□□ -0.45
HMGCL-207ENST00000498698 IRS4O14654 1257 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-207ENST00000498698 DDX58O95786 925 aaKnown RBP12.2□□□□□ -0.46
HMGCL-207ENST00000498698 TWISTNBQ3B726 338 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-207ENST00000498698 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
HMGCL-207ENST00000498698 GPC2Q8N158 579 aa12.2□□□□□ -0.46
HMGCL-207ENST00000498698 CCDC191Q8NCU4 936 aa12.2□□□□□ -0.46
HMGCL-207ENST00000498698 METTL22Q9BUU2 404 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-207ENST00000498698 ARFGEF2Q9Y6D5 1785 aa12.2□□□□□ -0.46
HMGCL-207ENST00000498698 WDR90Q96KV7 1748 aa12.2□□□□□ -0.46
HMGCL-207ENST00000498698 PPIP5K2O43314 1243 aa12.19□□□□□ -0.46
HMGCL-207ENST00000498698 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
HMGCL-207ENST00000498698 AOC3Q16853 763 aa12.19□□□□□ -0.46
HMGCL-207ENST00000498698 DPP8Q6V1X1 898 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-207ENST00000498698 KSR2Q6VAB6 950 aa12.19□□□□□ -0.46
HMGCL-207ENST00000498698 TMC4Q7Z404 712 aa12.19□□□□□ -0.46
HMGCL-207ENST00000498698 MPNDQ8N594 471 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms