RNA–Protein interactions for RNA: ENST00000498559.5

AGAP3-225, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-225ENST00000498559 ZNF853P0CG23 659 aa23.46■■□□□ 1.35
AGAP3-225ENST00000498559 FKBP4Q02790 459 aaKnown RBP eCLIP23.46■■□□□ 1.35
AGAP3-225ENST00000498559 OLFM4Q6UX06 510 aa23.46■■□□□ 1.35
AGAP3-225ENST00000498559 COPS6Q7L5N1 327 aa23.46■■□□□ 1.35
AGAP3-225ENST00000498559 PPP1R42Q7Z4L9 355 aa23.46■■□□□ 1.35
AGAP3-225ENST00000498559 XAGE3Q8WTP9 111 aa23.46■■□□□ 1.35
AGAP3-225ENST00000498559 APAF1O14727 1248 aa23.45■■□□□ 1.34
AGAP3-225ENST00000498559 DPY19L2Q6NUT2 758 aa23.45■■□□□ 1.34
AGAP3-225ENST00000498559 RTKN2Q8IZC4 609 aa23.45■■□□□ 1.34
AGAP3-225ENST00000498559 JMYQ8N9B5 988 aa23.45■■□□□ 1.34
AGAP3-225ENST00000498559 RNF123Q5XPI4 1314 aa23.44■■□□□ 1.34
AGAP3-225ENST00000498559 HDGFL1Q5TGJ6 251 aa23.44■■□□□ 1.34
AGAP3-225ENST00000498559 SMC1BQ8NDV3 1235 aa23.44■■□□□ 1.34
AGAP3-225ENST00000498559 MBIPQ9NS73 344 aa23.44■■□□□ 1.34
AGAP3-225ENST00000498559 CHPF2Q9P2E5 772 aa23.44■■□□□ 1.34
AGAP3-225ENST00000498559 LAMB2P55268 1798 aa23.43■■□□□ 1.34
AGAP3-225ENST00000498559 HTRA3P83110 453 aa23.43■■□□□ 1.34
AGAP3-225ENST00000498559 HSP90AB3PQ58FF7 597 aa23.43■■□□□ 1.34
AGAP3-225ENST00000498559 SLC10A5Q5PT55 438 aa23.43■■□□□ 1.34
AGAP3-225ENST00000498559 C3orf67Q6ZVT6 689 aa23.43■■□□□ 1.34
AGAP3-225ENST00000498559 AIMP1Q12904 312 aaKnown RBP23.42■■□□□ 1.34
AGAP3-225ENST00000498559 RPGRQ92834 1020 aaKnown RBP23.42■■□□□ 1.34
AGAP3-225ENST00000498559 CRAMP1Q96RY5 1269 aa23.42■■□□□ 1.34
AGAP3-225ENST00000498559 UTP14AQ9BVJ6 771 aaKnown RBP23.42■■□□□ 1.34
AGAP3-225ENST00000498559 IFT57Q9NWB7 429 aa23.42■■□□□ 1.34
AGAP3-225ENST00000498559 PCNTO95613 3336 aa23.41■■□□□ 1.34
AGAP3-225ENST00000498559 NLRP10Q86W26 655 aa23.41■■□□□ 1.34
AGAP3-225ENST00000498559 PSMD1Q99460 953 aa23.41■■□□□ 1.34
AGAP3-225ENST00000498559 ZNF277Q9NRM2 450 aaPredicted RBP23.41■■□□□ 1.34
AGAP3-225ENST00000498559 TCIRG1Q13488 830 aa23.4■■□□□ 1.34
AGAP3-225ENST00000498559 CCDC184Q52MB2 194 aa23.4■■□□□ 1.34
AGAP3-225ENST00000498559 DUSP27Q5VZP5 1158 aa23.4■■□□□ 1.34
AGAP3-225ENST00000498559 CC2D2BQ6DHV5 1058 aa23.4■■□□□ 1.34
AGAP3-225ENST00000498559 DBF4Q9UBU7 674 aaPredicted RBP23.4■■□□□ 1.34
AGAP3-225ENST00000498559 GNAI1P63096 354 aa23.39■■□□□ 1.33
AGAP3-225ENST00000498559 CALD1Q05682 793 aaKnown RBP23.39■■□□□ 1.33
AGAP3-225ENST00000498559 RBM17Q96I25 401 aaKnown RBP23.39■■□□□ 1.33
AGAP3-225ENST00000498559 SCN4AP35499 1836 aa23.38■■□□□ 1.33
AGAP3-225ENST00000498559 DDNO94850 711 aaPredicted RBP23.38■■□□□ 1.33
AGAP3-225ENST00000498559 NLRP3Q96P20 1036 aa23.38■■□□□ 1.33
AGAP3-225ENST00000498559 IARSP41252 1262 aaKnown RBP23.37■■□□□ 1.33
AGAP3-225ENST00000498559 SYNE4Q8N205 404 aa23.37■■□□□ 1.33
AGAP3-225ENST00000498559 PLBD2Q8NHP8 589 aa23.37■■□□□ 1.33
AGAP3-225ENST00000498559 L3MBTL3Q96JM7 780 aaPredicted RBP23.37■■□□□ 1.33
AGAP3-225ENST00000498559 COL4A5P29400 1685 aa23.37■■□□□ 1.33
AGAP3-225ENST00000498559 DDX60Q8IY21 1712 aaKnown RBP23.36■■□□□ 1.33
AGAP3-225ENST00000498559 PPEF1O14829 653 aaPredicted RBP23.36■■□□□ 1.33
AGAP3-225ENST00000498559 GRIPAP1Q4V328 841 aa23.36■■□□□ 1.33
AGAP3-225ENST00000498559 SLC51AQ86UW1 340 aa23.36■■□□□ 1.33
AGAP3-225ENST00000498559 HYPKQ9NX55 129 aa23.36■■□□□ 1.33
AGAP3-225ENST00000498559 ZNF541Q9H0D2 1346 aa23.35■■□□□ 1.33
AGAP3-225ENST00000498559 ANKRD13DQ6ZTN6 518 aa23.35■■□□□ 1.33
AGAP3-225ENST00000498559 SH3TC1Q8TE82 1336 aa23.34■■□□□ 1.33
AGAP3-225ENST00000498559 FZD9O00144 591 aa23.34■■□□□ 1.33
AGAP3-225ENST00000498559 ISCA1Q9BUE6 129 aa23.34■■□□□ 1.33
AGAP3-225ENST00000498559 TRMT112Q9UI30 125 aaKnown RBP23.34■■□□□ 1.33
AGAP3-225ENST00000498559 ABCC4O15439 1325 aa23.33■■□□□ 1.33
AGAP3-225ENST00000498559 HCLS1P14317 486 aaPredicted RBP23.33■■□□□ 1.33
AGAP3-225ENST00000498559 ZNF316A6NFI3 1004 aaPredicted RBP23.32■■□□□ 1.32
AGAP3-225ENST00000498559 ATP6V0A2Q9Y487 856 aa23.32■■□□□ 1.32
AGAP3-225ENST00000498559 IQCA1LA6NCM1 817 aa23.31■■□□□ 1.32
AGAP3-225ENST00000498559 CCDC27Q2M243 656 aa23.31■■□□□ 1.32
AGAP3-225ENST00000498559 TRIM28Q13263 835 aaKnown RBP23.3■■□□□ 1.32
AGAP3-225ENST00000498559 C8orf58Q8NAV2 365 aa23.3■■□□□ 1.32
AGAP3-225ENST00000498559 LRRC37AA6NMS7 1700 aa23.3■■□□□ 1.32
AGAP3-225ENST00000498559 ADAMTSL1Q8N6G6 1762 aa23.29■■□□□ 1.32
AGAP3-225ENST00000498559 POTEIP0CG38 1075 aa23.29■■□□□ 1.32
AGAP3-225ENST00000498559 POTEJP0CG39 1038 aa23.29■■□□□ 1.32
AGAP3-225ENST00000498559 TAF1P21675 1872 aa23.29■■□□□ 1.32
AGAP3-225ENST00000498559 COL13A1Q5TAT6 717 aaPredicted RBP23.29■■□□□ 1.32
AGAP3-225ENST00000498559 JDP2Q8WYK2 163 aa23.29■■□□□ 1.32
AGAP3-225ENST00000498559 TAF1DQ9H5J8 278 aaPredicted RBP23.29■■□□□ 1.32
AGAP3-225ENST00000498559 ELL2O00472 640 aaPredicted RBP23.28■■□□□ 1.32
AGAP3-225ENST00000498559 TCERG1O14776 1098 aaKnown RBP23.28■■□□□ 1.32
AGAP3-225ENST00000498559 BBOX1O75936 387 aa23.28■■□□□ 1.32
AGAP3-225ENST00000498559 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
AGAP3-225ENST00000498559 CHADLQ6NUI6 762 aa23.28■■□□□ 1.32
AGAP3-225ENST00000498559 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
AGAP3-225ENST00000498559 ATP5J2-PTCD1G3V325 749 aa23.27■■□□□ 1.32
AGAP3-225ENST00000498559 GPC2Q8N158 579 aa23.27■■□□□ 1.32
AGAP3-225ENST00000498559 RTFDC1Q9BY42 306 aaPredicted RBP23.27■■□□□ 1.32
AGAP3-225ENST00000498559 GRAPQ13588 217 aa23.26■■□□□ 1.31
AGAP3-225ENST00000498559 DDX46Q7L014 1031 aaKnown RBP23.26■■□□□ 1.31
AGAP3-225ENST00000498559 WWC1Q8IX03 1113 aa23.26■■□□□ 1.31
AGAP3-225ENST00000498559 SP8Q8IXZ3 490 aa23.26■■□□□ 1.31
AGAP3-225ENST00000498559 GRAPLQ8TC17 118 aaPredicted RBP23.26■■□□□ 1.31
AGAP3-225ENST00000498559 GOLGA2Q08379 1002 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 LDHDQ86WU2 507 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 LARGE2Q8N3Y3 721 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 TSPYL6Q8N831 410 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 ZNF428Q96B54 188 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 FAM89AQ96GI7 184 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 CHMP4AQ9BY43 222 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 VPS33BQ9H267 617 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 MRS2Q9HD23 443 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 HACL1Q9UJ83 578 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 DUOX1Q9NRD9 1551 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 LTBP1Q14766 1721 aa23.25■■□□□ 1.31
AGAP3-225ENST00000498559 ANP32CO43423 234 aa23.24■■□□□ 1.31
AGAP3-225ENST00000498559 SF3B3Q15393 1217 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms