RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 PSMD1Q99460 953 aa15.61■□□□□ 0.09
CDK9-205ENST00000498339 ABCC12Q96J65 1359 aa15.61■□□□□ 0.09
CDK9-205ENST00000498339 TRAF5O00463 557 aa15.6■□□□□ 0.09
CDK9-205ENST00000498339 MCM10Q7L590 875 aa15.6■□□□□ 0.09
CDK9-205ENST00000498339 NUTM1Q86Y26 1132 aa15.6■□□□□ 0.09
CDK9-205ENST00000498339 NYXQ9GZU5 481 aa15.6■□□□□ 0.09
CDK9-205ENST00000498339 TCERG1O14776 1098 aaKnown RBP15.59■□□□□ 0.09
CDK9-205ENST00000498339 EPS15P42566 896 aa15.59■□□□□ 0.09
CDK9-205ENST00000498339 SCNN1DP51172 638 aa15.59■□□□□ 0.09
CDK9-205ENST00000498339 HLFQ16534 295 aa15.59■□□□□ 0.09
CDK9-205ENST00000498339 NGEFQ8N5V2 710 aa15.59■□□□□ 0.09
CDK9-205ENST00000498339 PHACTR3Q96KR7 559 aa15.59■□□□□ 0.09
CDK9-205ENST00000498339 NBPF26B4DH59 902 aa15.58■□□□□ 0.08
CDK9-205ENST00000498339 CC2D2BQ6DHV5 1058 aa15.58■□□□□ 0.08
CDK9-205ENST00000498339 NBPF10Q6P3W6 841 aaKnown RBP15.58■□□□□ 0.08
CDK9-205ENST00000498339 USP50Q70EL3 339 aaPredicted RBP15.58■□□□□ 0.08
CDK9-205ENST00000498339 NIM1KQ8IY84 436 aa15.58■□□□□ 0.08
CDK9-205ENST00000498339 NBPF15Q8N660 670 aa15.58■□□□□ 0.08
CDK9-205ENST00000498339 CFAP53Q96M91 514 aa15.58■□□□□ 0.08
CDK9-205ENST00000498339 SNED1Q8TER0 1413 aa15.58■□□□□ 0.08
CDK9-205ENST00000498339 RGL2O15211 777 aa15.57■□□□□ 0.08
CDK9-205ENST00000498339 AOC2O75106 756 aa15.57■□□□□ 0.08
CDK9-205ENST00000498339 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
CDK9-205ENST00000498339 TLL2Q9Y6L7 1015 aa15.57■□□□□ 0.08
CDK9-205ENST00000498339 DLG5Q8TDM6 1919 aa15.56■□□□□ 0.08
CDK9-205ENST00000498339 PPEF1O14829 653 aaPredicted RBP15.56■□□□□ 0.08
CDK9-205ENST00000498339 PER1O15534 1290 aaPredicted RBP15.56■□□□□ 0.08
CDK9-205ENST00000498339 DCTN1Q14203 1278 aa15.56■□□□□ 0.08
CDK9-205ENST00000498339 CRY2Q49AN0 593 aa15.56■□□□□ 0.08
CDK9-205ENST00000498339 KIF6Q6ZMV9 814 aa15.56■□□□□ 0.08
CDK9-205ENST00000498339 TMX4Q9H1E5 349 aaPredicted RBP15.56■□□□□ 0.08
CDK9-205ENST00000498339 ZNF408Q9H9D4 720 aa15.56■□□□□ 0.08
CDK9-205ENST00000498339 PPIP5K2O43314 1243 aa15.55■□□□□ 0.08
CDK9-205ENST00000498339 CELF2O95319 508 aaKnown RBP15.55■□□□□ 0.08
CDK9-205ENST00000498339 GPTP24298 496 aa15.55■□□□□ 0.08
CDK9-205ENST00000498339 CST9Q5W186 159 aa15.55■□□□□ 0.08
CDK9-205ENST00000498339 RBM17Q96I25 401 aaKnown RBP15.55■□□□□ 0.08
CDK9-205ENST00000498339 KDM3BQ7LBC6 1761 aa15.54■□□□□ 0.08
CDK9-205ENST00000498339 RIC1Q4ADV7 1423 aa15.54■□□□□ 0.08
CDK9-205ENST00000498339 CA12O43570 354 aa15.54■□□□□ 0.08
CDK9-205ENST00000498339 U2AF1L5P0DN76 240 aaPredicted RBP15.54■□□□□ 0.08
CDK9-205ENST00000498339 MAP2K2P36507 400 aa15.54■□□□□ 0.08
CDK9-205ENST00000498339 U2AF1Q01081 240 aaKnown RBP eCLIP15.54■□□□□ 0.08
CDK9-205ENST00000498339 GRIPAP1Q4V328 841 aa15.54■□□□□ 0.08
CDK9-205ENST00000498339 MCOLN1Q9GZU1 580 aa15.54■□□□□ 0.08
CDK9-205ENST00000498339 ADARB2Q9NS39 739 aaKnown RBP15.54■□□□□ 0.08
CDK9-205ENST00000498339 NUDCQ9Y266 331 aa15.54■□□□□ 0.08
CDK9-205ENST00000498339 MAP3K15Q6ZN16 1313 aa15.53■□□□□ 0.08
CDK9-205ENST00000498339 RGS19P49795 217 aa15.53■□□□□ 0.08
CDK9-205ENST00000498339 AOC3Q16853 763 aa15.53■□□□□ 0.08
CDK9-205ENST00000498339 SLC51AQ86UW1 340 aa15.53■□□□□ 0.08
CDK9-205ENST00000498339 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
CDK9-205ENST00000498339 GPRC5DQ9NZD1 345 aa15.53■□□□□ 0.08
CDK9-205ENST00000498339 LAMB2P55268 1798 aa15.52■□□□□ 0.08
CDK9-205ENST00000498339 NPC1L1Q9UHC9 1359 aa15.52■□□□□ 0.08
CDK9-205ENST00000498339 MYL6BP14649 208 aa15.52■□□□□ 0.08
CDK9-205ENST00000498339 DGKZQ13574 1117 aa15.52■□□□□ 0.08
CDK9-205ENST00000498339 GLIS2Q9BZE0 524 aaPredicted RBP15.52■□□□□ 0.08
CDK9-205ENST00000498339 RRP7AQ9Y3A4 280 aaKnown RBP15.52■□□□□ 0.08
CDK9-205ENST00000498339 IBTKQ9P2D0 1353 aaPredicted RBP15.51■□□□□ 0.07
CDK9-205ENST00000498339 UBN2Q6ZU65 1347 aa15.51■□□□□ 0.07
CDK9-205ENST00000498339 TNRC18O15417 2968 aaPredicted RBP15.51■□□□□ 0.07
CDK9-205ENST00000498339 SAPCD2Q86UD0 394 aa15.51■□□□□ 0.07
CDK9-205ENST00000498339 CCER1Q8TC90 406 aaPredicted RBP15.51■□□□□ 0.07
CDK9-205ENST00000498339 BCL2L13Q9BXK5 485 aa15.51■□□□□ 0.07
CDK9-205ENST00000498339 MIS18AQ9NYP9 233 aa15.51■□□□□ 0.07
CDK9-205ENST00000498339 ERVV-1B6SEH8 477 aa15.5■□□□□ 0.07
CDK9-205ENST00000498339 HOXA10P31260 410 aaPredicted RBP15.5■□□□□ 0.07
CDK9-205ENST00000498339 GMPSP49915 693 aaPredicted RBP15.5■□□□□ 0.07
CDK9-205ENST00000498339 BRPF1P55201 1214 aaPredicted RBP15.5■□□□□ 0.07
CDK9-205ENST00000498339 TAF7Q15545 349 aaPredicted RBP15.5■□□□□ 0.07
CDK9-205ENST00000498339 TTLL7Q6ZT98 887 aa15.5■□□□□ 0.07
CDK9-205ENST00000498339 CRAMP1Q96RY5 1269 aa15.5■□□□□ 0.07
CDK9-205ENST00000498339 ANKRD36CQ5JPF3 1778 aa15.49■□□□□ 0.07
CDK9-205ENST00000498339 AKAP11Q9UKA4 1901 aa15.49■□□□□ 0.07
CDK9-205ENST00000498339 SUSD4Q5VX71 490 aa15.49■□□□□ 0.07
CDK9-205ENST00000498339 CIAPIN1Q6FI81 312 aa15.49■□□□□ 0.07
CDK9-205ENST00000498339 SUPT20HQ8NEM7 779 aa15.49■□□□□ 0.07
CDK9-205ENST00000498339 PCDH10Q9P2E7 1040 aa15.49■□□□□ 0.07
CDK9-205ENST00000498339 NEFMP07197 916 aa15.48■□□□□ 0.07
CDK9-205ENST00000498339 C3orf67Q6ZVT6 689 aa15.48■□□□□ 0.07
CDK9-205ENST00000498339 PPP1R42Q7Z4L9 355 aa15.48■□□□□ 0.07
CDK9-205ENST00000498339 NLRP3Q96P20 1036 aa15.48■□□□□ 0.07
CDK9-205ENST00000498339 ZNRF3Q9ULT6 936 aa15.48■□□□□ 0.07
CDK9-205ENST00000498339 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
CDK9-205ENST00000498339 NTSR2O95665 410 aa15.47■□□□□ 0.07
CDK9-205ENST00000498339 TAF1P21675 1872 aa15.47■□□□□ 0.07
CDK9-205ENST00000498339 CXCL9Q07325 125 aa15.47■□□□□ 0.07
CDK9-205ENST00000498339 DPP8Q6V1X1 898 aaPredicted RBP15.47■□□□□ 0.07
CDK9-205ENST00000498339 HHIPL1Q96JK4 782 aa15.47■□□□□ 0.07
CDK9-205ENST00000498339 ATP6V0A2Q9Y487 856 aa15.47■□□□□ 0.07
CDK9-205ENST00000498339 POLR2AP24928 1970 aaKnown RBP15.46■□□□□ 0.07
CDK9-205ENST00000498339 RAD17O75943 681 aa15.46■□□□□ 0.07
CDK9-205ENST00000498339 NOGQ13253 232 aa15.46■□□□□ 0.07
CDK9-205ENST00000498339 PNISRQ8TF01 805 aaKnown RBP15.46■□□□□ 0.07
CDK9-205ENST00000498339 ABCC4O15439 1325 aa15.45■□□□□ 0.06
CDK9-205ENST00000498339 CDHR2Q9BYE9 1310 aa15.45■□□□□ 0.06
CDK9-205ENST00000498339 HUNKP57058 714 aa15.45■□□□□ 0.06
CDK9-205ENST00000498339 TNIP1Q15025 636 aa15.45■□□□□ 0.06
CDK9-205ENST00000498339 CDC37L1Q7L3B6 337 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms