RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 PTK2Q05397 1052 aa11.51□□□□□ -0.57
VPS45-210ENST00000497638 R3HDM1Q15032 1099 aaKnown RBP11.51□□□□□ -0.57
VPS45-210ENST00000497638 PGPEP1Q9NXJ5 209 aa11.51□□□□□ -0.57
VPS45-210ENST00000497638 CDV3Q9UKY7 258 aaKnown RBP11.51□□□□□ -0.57
VPS45-210ENST00000497638 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
VPS45-210ENST00000497638 FMN2Q9NZ56 1722 aa11.51□□□□□ -0.57
VPS45-210ENST00000497638 PPLO60437 1756 aa11.5□□□□□ -0.57
VPS45-210ENST00000497638 PPP1R26Q5T8A7 1209 aaPredicted RBP11.5□□□□□ -0.57
VPS45-210ENST00000497638 KCTD15Q96SI1 283 aaPredicted RBP11.5□□□□□ -0.57
VPS45-210ENST00000497638 ABCA3Q99758 1704 aa11.49□□□□□ -0.57
VPS45-210ENST00000497638 FAM181BA6NEQ2 426 aa11.49□□□□□ -0.57
VPS45-210ENST00000497638 KRT28Q7Z3Y7 464 aa11.49□□□□□ -0.57
VPS45-210ENST00000497638 PNMA1Q8ND90 353 aa11.49□□□□□ -0.57
VPS45-210ENST00000497638 ARHGEF10O15013 1369 aa11.49□□□□□ -0.57
VPS45-210ENST00000497638 ADGRB2O60241 1585 aa11.49□□□□□ -0.57
VPS45-210ENST00000497638 PSME1Q06323 249 aa11.48□□□□□ -0.57
VPS45-210ENST00000497638 ZSCAN1Q8NBB4 408 aa11.48□□□□□ -0.57
VPS45-210ENST00000497638 SBNO1A3KN83 1393 aa11.48□□□□□ -0.57
VPS45-210ENST00000497638 KNDC1Q76NI1 1749 aa11.48□□□□□ -0.57
VPS45-210ENST00000497638 NRAPQ86VF7 1730 aa11.48□□□□□ -0.57
VPS45-210ENST00000497638 TNS1Q9HBL0 1735 aaKnown RBP11.47□□□□□ -0.57
VPS45-210ENST00000497638 DHX9Q08211 1270 aaKnown RBP11.47□□□□□ -0.57
VPS45-210ENST00000497638 PARD3Q8TEW0 1356 aa11.46□□□□□ -0.57
VPS45-210ENST00000497638 ABCC11Q96J66 1382 aa11.46□□□□□ -0.57
VPS45-210ENST00000497638 CBLBQ13191 982 aa11.46□□□□□ -0.57
VPS45-210ENST00000497638 EPS8L1Q8TE68 723 aa11.46□□□□□ -0.57
VPS45-210ENST00000497638 DNMT3LQ9UJW3 386 aa11.46□□□□□ -0.57
VPS45-210ENST00000497638 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
VPS45-210ENST00000497638 WAPLQ7Z5K2 1190 aa11.45□□□□□ -0.58
VPS45-210ENST00000497638 ADAM32Q8TC27 787 aa11.45□□□□□ -0.58
VPS45-210ENST00000497638 GPSM3Q9Y4H4 160 aa11.45□□□□□ -0.58
VPS45-210ENST00000497638 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
VPS45-210ENST00000497638 THSD7AQ9UPZ6 1657 aa11.44□□□□□ -0.58
VPS45-210ENST00000497638 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
VPS45-210ENST00000497638 TTLL8A6PVC2 850 aa11.44□□□□□ -0.58
VPS45-210ENST00000497638 PPFIA3O75145 1194 aa11.44□□□□□ -0.58
VPS45-210ENST00000497638 ITGAEP38570 1179 aa11.44□□□□□ -0.58
VPS45-210ENST00000497638 RFC5P40937 340 aa11.44□□□□□ -0.58
VPS45-210ENST00000497638 HMX1Q9NP08 348 aaPredicted RBP11.44□□□□□ -0.58
VPS45-210ENST00000497638 STK26Q9P289 416 aa11.44□□□□□ -0.58
VPS45-210ENST00000497638 COL14A1Q05707 1796 aaKnown RBP11.44□□□□□ -0.58
VPS45-210ENST00000497638 RRBP1Q9P2E9 1410 aaKnown RBP11.43□□□□□ -0.58
VPS45-210ENST00000497638 IFT172Q9UG01 1749 aa11.43□□□□□ -0.58
VPS45-210ENST00000497638 PLEKHH1Q9ULM0 1364 aa11.43□□□□□ -0.58
VPS45-210ENST00000497638 SLC24A1O60721 1099 aa11.43□□□□□ -0.58
VPS45-210ENST00000497638 EZH2Q15910 746 aaKnown RBP11.43□□□□□ -0.58
VPS45-210ENST00000497638 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.43□□□□□ -0.58
VPS45-210ENST00000497638 OCSTAMPQ9BR26 566 aa11.43□□□□□ -0.58
VPS45-210ENST00000497638 SPATA31A5Q5VU36 1347 aa11.42□□□□□ -0.58
VPS45-210ENST00000497638 SPATA31A7Q8IWB4 1347 aa11.42□□□□□ -0.58
VPS45-210ENST00000497638 FIGNL2A6NMB9 653 aa11.42□□□□□ -0.58
VPS45-210ENST00000497638 INTS6LQ5JSJ4 861 aaKnown RBP11.42□□□□□ -0.58
VPS45-210ENST00000497638 Q6ZVU0 165 aa11.42□□□□□ -0.58
VPS45-210ENST00000497638 PCMTD1Q96MG8 357 aaPredicted RBP11.42□□□□□ -0.58
VPS45-210ENST00000497638 CAMKK2Q96RR4 588 aa11.42□□□□□ -0.58
VPS45-210ENST00000497638 BTG4Q9NY30 223 aa11.42□□□□□ -0.58
VPS45-210ENST00000497638 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
VPS45-210ENST00000497638 VSIG8P0DPA2 414 aa11.41□□□□□ -0.58
VPS45-210ENST00000497638 RAB15P59190 212 aa11.41□□□□□ -0.58
VPS45-210ENST00000497638 NBPF20Q3BBV1 942 aa11.41□□□□□ -0.58
VPS45-210ENST00000497638 FAM182BQ5T319 152 aa11.41□□□□□ -0.58
VPS45-210ENST00000497638 DZIP3Q86Y13 1208 aaKnown RBP11.41□□□□□ -0.58
VPS45-210ENST00000497638 RGPD8O14715 1765 aaPredicted RBP11.41□□□□□ -0.58
VPS45-210ENST00000497638 ANKRD30BQ9BXX2 1392 aa11.41□□□□□ -0.58
VPS45-210ENST00000497638 ADGRF5Q8IZF2 1346 aa11.4□□□□□ -0.58
VPS45-210ENST00000497638 RREB1Q92766 1687 aa11.4□□□□□ -0.58
VPS45-210ENST00000497638 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
VPS45-210ENST00000497638 SIRT1Q96EB6 747 aa11.4□□□□□ -0.58
VPS45-210ENST00000497638 YTHDC2Q9H6S0 1430 aaKnown RBP11.4□□□□□ -0.58
VPS45-210ENST00000497638 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
VPS45-210ENST00000497638 ANKARQ7Z5J8 1434 aa11.39□□□□□ -0.59
VPS45-210ENST00000497638 PPP1R1BQ9UD71 204 aaPredicted RBP11.39□□□□□ -0.59
VPS45-210ENST00000497638 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
VPS45-210ENST00000497638 TRPM3Q9HCF6 1732 aaPredicted RBP11.38□□□□□ -0.59
VPS45-210ENST00000497638 PIK3C2GO75747 1445 aa11.38□□□□□ -0.59
VPS45-210ENST00000497638 SPINT1O43278 529 aa11.38□□□□□ -0.59
VPS45-210ENST00000497638 TRIM37O94972 964 aa11.38□□□□□ -0.59
VPS45-210ENST00000497638 LORP23490 312 aaPredicted RBP11.38□□□□□ -0.59
VPS45-210ENST00000497638 RELBQ01201 579 aa11.38□□□□□ -0.59
VPS45-210ENST00000497638 NBPF8Q3BBV2 869 aa11.38□□□□□ -0.59
VPS45-210ENST00000497638 AGBL1Q96MI9 1066 aa11.38□□□□□ -0.59
VPS45-210ENST00000497638 SPON1Q9HCB6 807 aa11.38□□□□□ -0.59
VPS45-210ENST00000497638 ALS2Q96Q42 1657 aa11.37□□□□□ -0.59
VPS45-210ENST00000497638 APBA3O96018 575 aa11.37□□□□□ -0.59
VPS45-210ENST00000497638 TMEM132EQ6IEE7 984 aa11.37□□□□□ -0.59
VPS45-210ENST00000497638 IL27Q8NEV9 243 aa11.37□□□□□ -0.59
VPS45-210ENST00000497638 GOPCQ9HD26 462 aa11.37□□□□□ -0.59
VPS45-210ENST00000497638 TMPRSS4Q9NRS4 437 aa11.37□□□□□ -0.59
VPS45-210ENST00000497638 PTSQ03393 145 aa11.36□□□□□ -0.59
VPS45-210ENST00000497638 TMEM259Q4ZIN3 620 aa11.36□□□□□ -0.59
VPS45-210ENST00000497638 GPRASP1Q5JY77 1395 aa11.36□□□□□ -0.59
VPS45-210ENST00000497638 SPATA31A1Q5TZJ5 1347 aa11.35□□□□□ -0.59
VPS45-210ENST00000497638 SPATA31E1Q6ZUB1 1445 aa11.35□□□□□ -0.59
VPS45-210ENST00000497638 KCNQ2O43526 872 aa11.35□□□□□ -0.59
VPS45-210ENST00000497638 PRDM11Q9NQV5 511 aa11.35□□□□□ -0.59
VPS45-210ENST00000497638 CRYBG1Q9Y4K1 1723 aa11.35□□□□□ -0.59
VPS45-210ENST00000497638 ZNF784Q8NCA9 323 aaPredicted RBP11.34□□□□□ -0.59
VPS45-210ENST00000497638 ZNF395Q9H8N7 513 aaPredicted RBP11.34□□□□□ -0.59
VPS45-210ENST00000497638 POLMQ9NP87 494 aaPredicted RBP11.34□□□□□ -0.59
VPS45-210ENST00000497638 EIF3AQ14152 1382 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms