RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 NASPP49321 788 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-224ENST00000497488 BCAMP50895 628 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 AGERQ15109 404 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 ARSHQ5FYA8 562 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 SH3TC2Q8TF17 1288 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 FOXJ1Q92949 421 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 LRCH3Q96II8 777 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 SLC4A9Q96Q91 983 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 C1QTNF2Q9BXJ5 285 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 OSBPL7Q9BZF2 842 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 SERTAD1Q9UHV2 236 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 CDV3Q9UKY7 258 aaKnown RBP8.21□□□□□ -1.1
BRCA1-224ENST00000497488 PCDHB3Q9Y5E6 796 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 CBLBQ13191 982 aa8.2□□□□□ -1.1
BRCA1-224ENST00000497488 TBCELQ5QJ74 424 aa8.2□□□□□ -1.1
BRCA1-224ENST00000497488 SLC9A9Q8IVB4 645 aa8.2□□□□□ -1.1
BRCA1-224ENST00000497488 ETFBKMTQ8IXQ9 262 aa8.2□□□□□ -1.1
BRCA1-224ENST00000497488 KANSL2Q9H9L4 492 aa8.2□□□□□ -1.1
BRCA1-224ENST00000497488 ZAP70P43403 619 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 APLP1P51693 650 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 PTPN5P54829 565 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 RAB15P59190 212 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 ERVK-9P63128 1117 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 ODR4Q5SWX8 454 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 KIAA0907Q7Z7F0 614 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-224ENST00000497488 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 APPBP2Q92624 585 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 CCDC136Q96JN2 1154 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 SPSB2Q99619 263 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 SPOCK3Q9BQ16 436 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 SPON2Q9BUD6 331 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 GEMIN8Q9NWZ8 242 aaKnown RBP8.19□□□□□ -1.1
BRCA1-224ENST00000497488 SCHIP1Q9P0W5 487 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-224ENST00000497488 FAM8A1Q9UBU6 413 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 MRVI1Q9Y6F6 885 aa8.19□□□□□ -1.1
BRCA1-224ENST00000497488 SOWAHBA6NEL2 793 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 PRC1O43663 620 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 CREB3O43889 395 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 CPNE3O75131 537 aaKnown RBP8.18□□□□□ -1.1
BRCA1-224ENST00000497488 GYS2P54840 703 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 RHBDL3P58872 404 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 PSMA6P60900 246 aaKnown RBP8.18□□□□□ -1.1
BRCA1-224ENST00000497488 IRX6P78412 446 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-224ENST00000497488 APBB1IPQ7Z5R6 666 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-224ENST00000497488 KIAA0825Q8IV33 1275 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 TRMT44Q8IYL2 757 aaKnown RBP8.18□□□□□ -1.1
BRCA1-224ENST00000497488 HNRNPLLQ8WVV9 542 aaKnown RBP8.18□□□□□ -1.1
BRCA1-224ENST00000497488 BAP1Q92560 729 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 IER2Q9BTL4 223 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 OSBPL3Q9H4L5 887 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 ESF1Q9H501 851 aaKnown RBP8.18□□□□□ -1.1
BRCA1-224ENST00000497488 ETNK1Q9HBU6 452 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 KBTBD4Q9NVX7 518 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-224ENST00000497488 HCSTQ9UBK5 93 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 STRIP2Q9ULQ0 834 aa8.18□□□□□ -1.1
BRCA1-224ENST00000497488 USP17L7P0C7H9 530 aa8.17□□□□□ -1.1
BRCA1-224ENST00000497488 PCSK2P16519 638 aa8.17□□□□□ -1.1
BRCA1-224ENST00000497488 PI16Q6UXB8 463 aa8.17□□□□□ -1.1
BRCA1-224ENST00000497488 HOMER1Q86YM7 354 aa8.17□□□□□ -1.1
BRCA1-224ENST00000497488 CCDC24Q8N4L8 307 aa8.17□□□□□ -1.1
BRCA1-224ENST00000497488 PRPF38AQ8NAV1 312 aaKnown RBP8.17□□□□□ -1.1
BRCA1-224ENST00000497488 TTF2Q9UNY4 1162 aaKnown RBP8.17□□□□□ -1.1
BRCA1-224ENST00000497488 EFR3BQ9Y2G0 817 aa8.17□□□□□ -1.1
BRCA1-224ENST00000497488 ESYT3A0FGR9 886 aa8.16□□□□□ -1.1
BRCA1-224ENST00000497488 LINC01559Q495D7 138 aa8.16□□□□□ -1.1
BRCA1-224ENST00000497488 POTEAQ6S8J7 498 aa8.16□□□□□ -1.1
BRCA1-224ENST00000497488 FERMT3Q86UX7 667 aa8.16□□□□□ -1.1
BRCA1-224ENST00000497488 LILRB2Q8N423 598 aa8.16□□□□□ -1.1
BRCA1-224ENST00000497488 ZNF511Q8NB15 262 aa8.16□□□□□ -1.1
BRCA1-224ENST00000497488 TRPM4Q8TD43 1214 aa8.16□□□□□ -1.1
BRCA1-224ENST00000497488 KCTD15Q96SI1 283 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-224ENST00000497488 A6NJY4 79 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 ERVH48-1M5A8F1 160 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 MASP1P48740 699 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 RALBP1Q15311 655 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 SGSM3Q96HU1 749 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 C8orf48Q96LL4 319 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 UBA5Q9GZZ9 404 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 GGNBP2Q9H3C7 697 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 GINM1Q9NU53 330 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 ADAMTS1Q9UHI8 967 aa8.15□□□□□ -1.1
BRCA1-224ENST00000497488 CCDC85CA6NKD9 419 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 NOS2P35228 1153 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 IRS1P35568 1242 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 SOX9P48436 509 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 BIRC2Q13490 618 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 MTFR1Q15390 333 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 C11orf91Q3C1V1 193 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 INTS6LQ5JSJ4 861 aaKnown RBP8.14□□□□□ -1.11
BRCA1-224ENST00000497488 EPS8L3Q8TE67 593 aaKnown RBP8.14□□□□□ -1.11
BRCA1-224ENST00000497488 CCDC74AQ96AQ1 378 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 NUDT16Q96DE0 195 aaKnown RBP8.14□□□□□ -1.11
BRCA1-224ENST00000497488 NGLY1Q96IV0 654 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 WBP1LQ9NX94 342 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 PRKAG3Q9UGI9 489 aa8.14□□□□□ -1.11
BRCA1-224ENST00000497488 THRAP3Q9Y2W1 955 aaKnown RBP8.14□□□□□ -1.11
BRCA1-224ENST00000497488 VIL1P09327 827 aaKnown RBP8.13□□□□□ -1.11
BRCA1-224ENST00000497488 DGKZQ13574 1117 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 C8orf34Q49A92 452 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms