RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 NIM1KQ8IY84 436 aa19.76■□□□□ 0.75
RNF220-218ENST00000497469 SHTN1A0MZ66 631 aa19.75■□□□□ 0.75
RNF220-218ENST00000497469 EN2P19622 333 aaPredicted RBP19.75■□□□□ 0.75
RNF220-218ENST00000497469 AMOTQ4VCS5 1084 aa19.75■□□□□ 0.75
RNF220-218ENST00000497469 CHRDL2Q6WN34 429 aa19.75■□□□□ 0.75
RNF220-218ENST00000497469 NBPF5PQ86XG9 351 aaPredicted RBP19.75■□□□□ 0.75
RNF220-218ENST00000497469 OTUD5Q96G74 571 aa19.75■□□□□ 0.75
RNF220-218ENST00000497469 H0YGN5 161 aa19.74■□□□□ 0.75
RNF220-218ENST00000497469 CAMTA2O94983 1202 aa19.74■□□□□ 0.75
RNF220-218ENST00000497469 C2orf69Q8N8R5 385 aa19.74■□□□□ 0.75
RNF220-218ENST00000497469 SLC52A2Q9HAB3 445 aa19.74■□□□□ 0.75
RNF220-218ENST00000497469 HTTP42858 3142 aa19.74■□□□□ 0.75
RNF220-218ENST00000497469 AEBP1Q8IUX7 1158 aa19.73■□□□□ 0.75
RNF220-218ENST00000497469 POLKQ9UBT6 870 aa19.73■□□□□ 0.75
RNF220-218ENST00000497469 NPC1L1Q9UHC9 1359 aa19.72■□□□□ 0.75
RNF220-218ENST00000497469 BRCA2P51587 3418 aa19.72■□□□□ 0.75
RNF220-218ENST00000497469 TESK2Q96S53 571 aa19.72■□□□□ 0.75
RNF220-218ENST00000497469 LGR6Q9HBX8 967 aa19.72■□□□□ 0.75
RNF220-218ENST00000497469 FAM177BA6PVY3 158 aa19.71■□□□□ 0.75
RNF220-218ENST00000497469 ADM5C9JUS6 153 aa19.71■□□□□ 0.75
RNF220-218ENST00000497469 ZC3H15Q8WU90 426 aaKnown RBP19.71■□□□□ 0.75
RNF220-218ENST00000497469 SIN3AQ96ST3 1273 aa19.71■□□□□ 0.75
RNF220-218ENST00000497469 KLRG2A4D1S0 409 aaPredicted RBP19.7■□□□□ 0.74
RNF220-218ENST00000497469 GPR25O00155 361 aa19.7■□□□□ 0.74
RNF220-218ENST00000497469 CXCL9Q07325 125 aa19.7■□□□□ 0.74
RNF220-218ENST00000497469 RASAL3Q86YV0 1011 aa19.7■□□□□ 0.74
RNF220-218ENST00000497469 RBM27Q9P2N5 1060 aaKnown RBP19.7■□□□□ 0.74
RNF220-218ENST00000497469 TCERG1O14776 1098 aaKnown RBP19.69■□□□□ 0.74
RNF220-218ENST00000497469 PPIP5K2O43314 1243 aa19.69■□□□□ 0.74
RNF220-218ENST00000497469 STARD3NLO95772 234 aa19.69■□□□□ 0.74
RNF220-218ENST00000497469 ALDH1B1P30837 517 aa19.69■□□□□ 0.74
RNF220-218ENST00000497469 AOC3Q16853 763 aa19.69■□□□□ 0.74
RNF220-218ENST00000497469 KRT26Q7Z3Y9 468 aa19.68■□□□□ 0.74
RNF220-218ENST00000497469 BCL2L13Q9BXK5 485 aa19.68■□□□□ 0.74
RNF220-218ENST00000497469 CEP290O15078 2479 aa19.68■□□□□ 0.74
RNF220-218ENST00000497469 CENPFP49454 3210 aa19.68■□□□□ 0.74
RNF220-218ENST00000497469 TNNT2P45379 298 aaPredicted RBP19.67■□□□□ 0.74
RNF220-218ENST00000497469 VSIG10Q8N0Z9 540 aa19.67■□□□□ 0.74
RNF220-218ENST00000497469 COL25A1Q9BXS0 654 aaPredicted RBP19.67■□□□□ 0.74
RNF220-218ENST00000497469 RANBP2P49792 3224 aaKnown RBP19.66■□□□□ 0.74
RNF220-218ENST00000497469 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
RNF220-218ENST00000497469 CARD14Q9BXL6 1004 aa19.66■□□□□ 0.74
RNF220-218ENST00000497469 MRC1P22897 1456 aa19.66■□□□□ 0.74
RNF220-218ENST00000497469 RBBP6Q7Z6E9 1792 aaKnown RBP19.65■□□□□ 0.74
RNF220-218ENST00000497469 RAD17O75943 681 aa19.64■□□□□ 0.73
RNF220-218ENST00000497469 INTS3Q68E01 1043 aaKnown RBP19.64■□□□□ 0.73
RNF220-218ENST00000497469 DZIP3Q86Y13 1208 aaKnown RBP19.64■□□□□ 0.73
RNF220-218ENST00000497469 R3HDMLQ9H3Y0 253 aa19.64■□□□□ 0.73
RNF220-218ENST00000497469 UBR2Q8IWV8 1755 aa19.63■□□□□ 0.73
RNF220-218ENST00000497469 FKTNO75072 461 aa19.63■□□□□ 0.73
RNF220-218ENST00000497469 A1BGP04217 495 aa19.63■□□□□ 0.73
RNF220-218ENST00000497469 IL6STP40189 918 aaPredicted RBP19.63■□□□□ 0.73
RNF220-218ENST00000497469 CNOT7Q9UIV1 285 aaKnown RBP19.63■□□□□ 0.73
RNF220-218ENST00000497469 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
RNF220-218ENST00000497469 SAMD7Q7Z3H4 446 aa19.62■□□□□ 0.73
RNF220-218ENST00000497469 REM2Q8IYK8 340 aaPredicted RBP19.62■□□□□ 0.73
RNF220-218ENST00000497469 ZNRF3Q9ULT6 936 aa19.62■□□□□ 0.73
RNF220-218ENST00000497469 TRIM17Q9Y577 477 aa19.62■□□□□ 0.73
RNF220-218ENST00000497469 KIAA0100Q14667 2235 aaKnown RBP19.61■□□□□ 0.73
RNF220-218ENST00000497469 RNMTO43148 476 aaKnown RBP19.61■□□□□ 0.73
RNF220-218ENST00000497469 EGFRP00533 1210 aa19.61■□□□□ 0.73
RNF220-218ENST00000497469 CC2D2BQ6DHV5 1058 aa19.61■□□□□ 0.73
RNF220-218ENST00000497469 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
RNF220-218ENST00000497469 MICALL2Q8IY33 904 aa19.61■□□□□ 0.73
RNF220-218ENST00000497469 CDHR2Q9BYE9 1310 aa19.6■□□□□ 0.73
RNF220-218ENST00000497469 TBC1D10BQ4KMP7 808 aaPredicted RBP19.6■□□□□ 0.73
RNF220-218ENST00000497469 TPTE2Q6XPS3 522 aa19.6■□□□□ 0.73
RNF220-218ENST00000497469 UNC80Q8N2C7 3258 aa19.59■□□□□ 0.73
RNF220-218ENST00000497469 ABCC12Q96J65 1359 aa19.58■□□□□ 0.73
RNF220-218ENST00000497469 H7C1D1 291 aa19.58■□□□□ 0.72
RNF220-218ENST00000497469 MKRN3Q13064 507 aaKnown RBP19.58■□□□□ 0.72
RNF220-218ENST00000497469 TTC5Q8N0Z6 440 aa19.58■□□□□ 0.72
RNF220-218ENST00000497469 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.72
RNF220-218ENST00000497469 NIP7Q9Y221 180 aaKnown RBP eCLIP19.58■□□□□ 0.72
RNF220-218ENST00000497469 SOX1O00570 391 aaPredicted RBP19.57■□□□□ 0.72
RNF220-218ENST00000497469 RBM26Q5T8P6 1007 aaKnown RBP19.57■□□□□ 0.72
RNF220-218ENST00000497469 SULT6B1Q6IMI4 303 aa19.57■□□□□ 0.72
RNF220-218ENST00000497469 OTOP1Q7RTM1 612 aa19.57■□□□□ 0.72
RNF220-218ENST00000497469 LRCH3Q96II8 777 aa19.57■□□□□ 0.72
RNF220-218ENST00000497469 ZBTB12Q9Y330 459 aaPredicted RBP19.57■□□□□ 0.72
RNF220-218ENST00000497469 PPEF1O14829 653 aaPredicted RBP19.56■□□□□ 0.72
RNF220-218ENST00000497469 GTF2E1P29083 439 aaPredicted RBP19.56■□□□□ 0.72
RNF220-218ENST00000497469 NOM1Q5C9Z4 860 aaKnown RBP19.56■□□□□ 0.72
RNF220-218ENST00000497469 DCPSQ96C86 337 aaKnown RBP19.56■□□□□ 0.72
RNF220-218ENST00000497469 CRY2Q49AN0 593 aa19.55■□□□□ 0.72
RNF220-218ENST00000497469 MOB2Q70IA6 237 aa19.55■□□□□ 0.72
RNF220-218ENST00000497469 NUTM1Q86Y26 1132 aa19.55■□□□□ 0.72
RNF220-218ENST00000497469 RPGRQ92834 1020 aaKnown RBP19.55■□□□□ 0.72
RNF220-218ENST00000497469 CDCA5Q96FF9 252 aa19.55■□□□□ 0.72
RNF220-218ENST00000497469 POLR2AP24928 1970 aaKnown RBP19.55■□□□□ 0.72
RNF220-218ENST00000497469 HEG1Q9ULI3 1381 aa19.55■□□□□ 0.72
RNF220-218ENST00000497469 ASTN2O75129 1339 aaPredicted RBP19.53■□□□□ 0.72
RNF220-218ENST00000497469 TNIP1Q15025 636 aa19.53■□□□□ 0.72
RNF220-218ENST00000497469 ZNF652Q9Y2D9 606 aa19.52■□□□□ 0.72
RNF220-218ENST00000497469 PRAMEF22A3QJZ6 481 aa19.51■□□□□ 0.71
RNF220-218ENST00000497469 YDJCA8MPS7 323 aa19.51■□□□□ 0.71
RNF220-218ENST00000497469 CLEC4GQ6UXB4 293 aa19.51■□□□□ 0.71
RNF220-218ENST00000497469 ARMC5Q96C12 935 aa19.51■□□□□ 0.71
RNF220-218ENST00000497469 TMEM106CQ9BVX2 250 aa19.51■□□□□ 0.71
RNF220-218ENST00000497469 GGA3Q9NZ52 723 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms