RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 ADARB2Q9NS39 739 aaKnown RBP14.17□□□□□ -0.14
TOM1-217ENST00000497448 NIP7Q9Y221 180 aaKnown RBP eCLIP14.17□□□□□ -0.14
TOM1-217ENST00000497448 LAMB4A4D0S4 1761 aa14.17□□□□□ -0.14
TOM1-217ENST00000497448 RIC1Q4ADV7 1423 aa14.16□□□□□ -0.14
TOM1-217ENST00000497448 KCNQ3O43525 872 aa14.16□□□□□ -0.14
TOM1-217ENST00000497448 NOGQ13253 232 aa14.16□□□□□ -0.14
TOM1-217ENST00000497448 CRY2Q49AN0 593 aa14.16□□□□□ -0.14
TOM1-217ENST00000497448 IL17REQ8NFR9 667 aa14.16□□□□□ -0.14
TOM1-217ENST00000497448 ZNF408Q9H9D4 720 aa14.16□□□□□ -0.14
TOM1-217ENST00000497448 GPRC5DQ9NZD1 345 aa14.16□□□□□ -0.14
TOM1-217ENST00000497448 CC2D2BQ6DHV5 1058 aa14.15□□□□□ -0.14
TOM1-217ENST00000497448 NIM1KQ8IY84 436 aa14.15□□□□□ -0.14
TOM1-217ENST00000497448 AKAP11Q9UKA4 1901 aa14.15□□□□□ -0.14
TOM1-217ENST00000497448 CEMIPQ8WUJ3 1361 aa14.14□□□□□ -0.15
TOM1-217ENST00000497448 NUP98P52948 1817 aa14.14□□□□□ -0.15
TOM1-217ENST00000497448 PRAMEF22A3QJZ6 481 aa14.14□□□□□ -0.15
TOM1-217ENST00000497448 USP16Q9Y5T5 823 aa14.14□□□□□ -0.15
TOM1-217ENST00000497448 COL3A1P02461 1466 aaPredicted RBP14.13□□□□□ -0.15
TOM1-217ENST00000497448 NPC1L1Q9UHC9 1359 aa14.13□□□□□ -0.15
TOM1-217ENST00000497448 GNAT3A8MTJ3 354 aa14.13□□□□□ -0.15
TOM1-217ENST00000497448 RGL2O15211 777 aa14.13□□□□□ -0.15
TOM1-217ENST00000497448 SAGE1Q9NXZ1 904 aa14.13□□□□□ -0.15
TOM1-217ENST00000497448 PPIP5K2O43314 1243 aa14.12□□□□□ -0.15
TOM1-217ENST00000497448 PGAP2Q9UHJ9 254 aa14.12□□□□□ -0.15
TOM1-217ENST00000497448 FAM155AB1AL88 458 aaPredicted RBP14.11□□□□□ -0.15
TOM1-217ENST00000497448 PPEF1O14829 653 aaPredicted RBP14.11□□□□□ -0.15
TOM1-217ENST00000497448 GTF2E1P29083 439 aaPredicted RBP14.11□□□□□ -0.15
TOM1-217ENST00000497448 GMPSP49915 693 aaPredicted RBP14.11□□□□□ -0.15
TOM1-217ENST00000497448 HUNKP57058 714 aa14.11□□□□□ -0.15
TOM1-217ENST00000497448 HLFQ16534 295 aa14.11□□□□□ -0.15
TOM1-217ENST00000497448 AOC3Q16853 763 aa14.11□□□□□ -0.15
TOM1-217ENST00000497448 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
TOM1-217ENST00000497448 GAS2L2Q8NHY3 880 aa14.11□□□□□ -0.15
TOM1-217ENST00000497448 TRPM4Q8TD43 1214 aa14.11□□□□□ -0.15
TOM1-217ENST00000497448 RPGRQ92834 1020 aaKnown RBP14.11□□□□□ -0.15
TOM1-217ENST00000497448 CDHR2Q9BYE9 1310 aa14.11□□□□□ -0.15
TOM1-217ENST00000497448 BTBD11A6QL63 1104 aa14.1□□□□□ -0.15
TOM1-217ENST00000497448 NBPF26B4DH59 902 aa14.1□□□□□ -0.15
TOM1-217ENST00000497448 DIAPH1O60610 1272 aaKnown RBP14.1□□□□□ -0.15
TOM1-217ENST00000497448 HOXA10P31260 410 aaPredicted RBP14.1□□□□□ -0.15
TOM1-217ENST00000497448 HIRAP54198 1017 aaPredicted RBP14.1□□□□□ -0.15
TOM1-217ENST00000497448 CXCL9Q07325 125 aa14.1□□□□□ -0.15
TOM1-217ENST00000497448 GRIPAP1Q4V328 841 aa14.1□□□□□ -0.15
TOM1-217ENST00000497448 NBPF10Q6P3W6 841 aaKnown RBP14.1□□□□□ -0.15
TOM1-217ENST00000497448 NBPF15Q8N660 670 aa14.1□□□□□ -0.15
TOM1-217ENST00000497448 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
TOM1-217ENST00000497448 TCERG1O14776 1098 aaKnown RBP14.09□□□□□ -0.15
TOM1-217ENST00000497448 AMER1Q5JTC6 1135 aaPredicted RBP14.09□□□□□ -0.15
TOM1-217ENST00000497448 CDC37L1Q7L3B6 337 aa14.09□□□□□ -0.15
TOM1-217ENST00000497448 ZC3H15Q8WU90 426 aaKnown RBP14.09□□□□□ -0.15
TOM1-217ENST00000497448 KNSTRNQ9Y448 316 aa14.09□□□□□ -0.15
TOM1-217ENST00000497448 IBTKQ9P2D0 1353 aaPredicted RBP14.09□□□□□ -0.15
TOM1-217ENST00000497448 RGMBQ6NW40 437 aa14.08□□□□□ -0.16
TOM1-217ENST00000497448 CTU1Q7Z7A3 348 aaKnown RBP14.08□□□□□ -0.16
TOM1-217ENST00000497448 NYXQ9GZU5 481 aa14.08□□□□□ -0.16
TOM1-217ENST00000497448 RNF186Q9NXI6 227 aa14.08□□□□□ -0.16
TOM1-217ENST00000497448 LAMB2P55268 1798 aa14.08□□□□□ -0.16
TOM1-217ENST00000497448 TRPA1O75762 1119 aa14.07□□□□□ -0.16
TOM1-217ENST00000497448 SNRPA1P09661 255 aaKnown RBP14.07□□□□□ -0.16
TOM1-217ENST00000497448 KIF23Q02241 960 aaPredicted RBP14.07□□□□□ -0.16
TOM1-217ENST00000497448 DLK2Q6UY11 383 aa14.07□□□□□ -0.16
TOM1-217ENST00000497448 ZNRF3Q9ULT6 936 aa14.07□□□□□ -0.16
TOM1-217ENST00000497448 HPS5Q9UPZ3 1129 aa14.07□□□□□ -0.16
TOM1-217ENST00000497448 MKI67P46013 3256 aaKnown RBP14.07□□□□□ -0.16
TOM1-217ENST00000497448 UBN2Q6ZU65 1347 aa14.07□□□□□ -0.16
TOM1-217ENST00000497448 POLR2AP24928 1970 aaKnown RBP14.06□□□□□ -0.16
TOM1-217ENST00000497448 SHTN1A0MZ66 631 aa14.06□□□□□ -0.16
TOM1-217ENST00000497448 USP48Q86UV5 1035 aa14.06□□□□□ -0.16
TOM1-217ENST00000497448 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
TOM1-217ENST00000497448 DUOX1Q9NRD9 1551 aa14.05□□□□□ -0.16
TOM1-217ENST00000497448 C3orf67Q6ZVT6 689 aa14.05□□□□□ -0.16
TOM1-217ENST00000497448 GCC1Q96CN9 775 aa14.05□□□□□ -0.16
TOM1-217ENST00000497448 RBM17Q96I25 401 aaKnown RBP14.05□□□□□ -0.16
TOM1-217ENST00000497448 BCL2L13Q9BXK5 485 aa14.05□□□□□ -0.16
TOM1-217ENST00000497448 VPS33BQ9H267 617 aa14.05□□□□□ -0.16
TOM1-217ENST00000497448 RAD17O75943 681 aa14.04□□□□□ -0.16
TOM1-217ENST00000497448 SLC10A3P09131 477 aa14.04□□□□□ -0.16
TOM1-217ENST00000497448 CCDC102AQ96A19 550 aa14.04□□□□□ -0.16
TOM1-217ENST00000497448 RTFDC1Q9BY42 306 aaPredicted RBP14.04□□□□□ -0.16
TOM1-217ENST00000497448 GBA2Q9HCG7 927 aaPredicted RBP14.04□□□□□ -0.16
TOM1-217ENST00000497448 LRRC37AA6NMS7 1700 aa14.04□□□□□ -0.16
TOM1-217ENST00000497448 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
TOM1-217ENST00000497448 HSPA5P11021 654 aaKnown RBP14.03□□□□□ -0.16
TOM1-217ENST00000497448 ZNF157P51786 506 aaPredicted RBP14.03□□□□□ -0.16
TOM1-217ENST00000497448 MICALL2Q8IY33 904 aa14.03□□□□□ -0.16
TOM1-217ENST00000497448 ATP6V0A2Q9Y487 856 aa14.03□□□□□ -0.16
TOM1-217ENST00000497448 ANKRD36CQ5JPF3 1778 aa14.03□□□□□ -0.16
TOM1-217ENST00000497448 KDM3BQ7LBC6 1761 aa14.03□□□□□ -0.16
TOM1-217ENST00000497448 DDX60Q8IY21 1712 aaKnown RBP14.02□□□□□ -0.16
TOM1-217ENST00000497448 ABCC4O15439 1325 aa14.02□□□□□ -0.17
TOM1-217ENST00000497448 MAP3K15Q6ZN16 1313 aa14.02□□□□□ -0.17
TOM1-217ENST00000497448 NTSR2O95665 410 aa14.02□□□□□ -0.17
TOM1-217ENST00000497448 GPTP24298 496 aa14.02□□□□□ -0.17
TOM1-217ENST00000497448 KIAA2012Q0VF49 1180 aa14.02□□□□□ -0.17
TOM1-217ENST00000497448 HABP4Q5JVS0 413 aaKnown RBP14.02□□□□□ -0.17
TOM1-217ENST00000497448 KRT26Q7Z3Y9 468 aa14.02□□□□□ -0.17
TOM1-217ENST00000497448 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.17
TOM1-217ENST00000497448 CCER1Q8TC90 406 aaPredicted RBP14.02□□□□□ -0.17
TOM1-217ENST00000497448 CSRNP1Q96S65 589 aa14.02□□□□□ -0.17
TOM1-217ENST00000497448 CNOT7Q9UIV1 285 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms