RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 CHMP3Q9Y3E7 222 aa19.59■□□□□ 0.73
PCBP4-216ENST00000497390 PHRF1Q9P1Y6 1649 aaKnown RBP19.58■□□□□ 0.73
PCBP4-216ENST00000497390 ZNF500O60304 480 aaPredicted RBP19.58■□□□□ 0.72
PCBP4-216ENST00000497390 KCNJ4P48050 445 aa19.58■□□□□ 0.72
PCBP4-216ENST00000497390 XAGE3Q8WTP9 111 aa19.58■□□□□ 0.72
PCBP4-216ENST00000497390 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.58■□□□□ 0.72
PCBP4-216ENST00000497390 CYP46A1Q9Y6A2 500 aa19.58■□□□□ 0.72
PCBP4-216ENST00000497390 SLC27A2O14975 620 aa19.57■□□□□ 0.72
PCBP4-216ENST00000497390 RBM10P98175 930 aaKnown RBP19.57■□□□□ 0.72
PCBP4-216ENST00000497390 G3BP1Q13283 466 aaKnown RBP eCLIP19.57■□□□□ 0.72
PCBP4-216ENST00000497390 HSP90AA2PQ14568 343 aaPredicted RBP19.57■□□□□ 0.72
PCBP4-216ENST00000497390 VPS53Q5VIR6 699 aa19.57■□□□□ 0.72
PCBP4-216ENST00000497390 ZNF790Q6PG37 636 aa19.57■□□□□ 0.72
PCBP4-216ENST00000497390 COPS6Q7L5N1 327 aa19.57■□□□□ 0.72
PCBP4-216ENST00000497390 C17orf53Q8N3J3 647 aaPredicted RBP19.57■□□□□ 0.72
PCBP4-216ENST00000497390 MYD88Q99836 296 aa19.57■□□□□ 0.72
PCBP4-216ENST00000497390 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
PCBP4-216ENST00000497390 NCAPD2Q15021 1401 aa19.57■□□□□ 0.72
PCBP4-216ENST00000497390 COL15A1P39059 1388 aa19.57■□□□□ 0.72
PCBP4-216ENST00000497390 RUFY2Q8WXA3 655 aa19.57■□□□□ 0.72
PCBP4-216ENST00000497390 SYAP1Q96A49 352 aaPredicted RBP19.57■□□□□ 0.72
PCBP4-216ENST00000497390 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
PCBP4-216ENST00000497390 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.57■□□□□ 0.72
PCBP4-216ENST00000497390 KDM6AO15550 1401 aaPredicted RBP19.57■□□□□ 0.72
PCBP4-216ENST00000497390 CDC37L1Q7L3B6 337 aa19.56■□□□□ 0.72
PCBP4-216ENST00000497390 MAP4K1Q92918 833 aa19.56■□□□□ 0.72
PCBP4-216ENST00000497390 ZNF496Q96IT1 587 aaPredicted RBP19.56■□□□□ 0.72
PCBP4-216ENST00000497390 FSD1Q9BTV5 496 aa19.56■□□□□ 0.72
PCBP4-216ENST00000497390 NEURL1BA8MQ27 555 aa19.56■□□□□ 0.72
PCBP4-216ENST00000497390 AP5Z1O43299 807 aa19.56■□□□□ 0.72
PCBP4-216ENST00000497390 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
PCBP4-216ENST00000497390 STK3Q13188 491 aa19.56■□□□□ 0.72
PCBP4-216ENST00000497390 SLFNL1Q499Z3 407 aa19.56■□□□□ 0.72
PCBP4-216ENST00000497390 KRT28Q7Z3Y7 464 aa19.56■□□□□ 0.72
PCBP4-216ENST00000497390 CABLES1Q8TDN4 633 aa19.56■□□□□ 0.72
PCBP4-216ENST00000497390 ERBB3P21860 1342 aa19.55■□□□□ 0.72
PCBP4-216ENST00000497390 CCDC183Q5T5S1 534 aa19.55■□□□□ 0.72
PCBP4-216ENST00000497390 KCNB2Q92953 911 aa19.55■□□□□ 0.72
PCBP4-216ENST00000497390 NPHP4O75161 1426 aaPredicted RBP19.55■□□□□ 0.72
PCBP4-216ENST00000497390 PTMAP06454 111 aaKnown RBP19.55■□□□□ 0.72
PCBP4-216ENST00000497390 UBE2HP62256 183 aa19.55■□□□□ 0.72
PCBP4-216ENST00000497390 CCDC129Q6ZRS4 1044 aa19.55■□□□□ 0.72
PCBP4-216ENST00000497390 UBE2Q2Q8WVN8 375 aa19.55■□□□□ 0.72
PCBP4-216ENST00000497390 GPATCH3Q96I76 525 aa19.55■□□□□ 0.72
PCBP4-216ENST00000497390 NLRP2Q9NX02 1062 aa19.55■□□□□ 0.72
PCBP4-216ENST00000497390 SLIT3O75094 1523 aa19.55■□□□□ 0.72
PCBP4-216ENST00000497390 UTYO14607 1347 aa19.54■□□□□ 0.72
PCBP4-216ENST00000497390 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
PCBP4-216ENST00000497390 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
PCBP4-216ENST00000497390 ERC1Q8IUD2 1116 aa19.54■□□□□ 0.72
PCBP4-216ENST00000497390 SEC62Q99442 399 aaKnown RBP19.54■□□□□ 0.72
PCBP4-216ENST00000497390 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.54■□□□□ 0.72
PCBP4-216ENST00000497390 CCDC39Q9UFE4 941 aa19.54■□□□□ 0.72
PCBP4-216ENST00000497390 GCKRQ14397 625 aa19.53■□□□□ 0.72
PCBP4-216ENST00000497390 TTC12Q9H892 705 aaPredicted RBP19.53■□□□□ 0.72
PCBP4-216ENST00000497390 PLCB2Q00722 1185 aa19.53■□□□□ 0.72
PCBP4-216ENST00000497390 DBNLQ9UJU6 430 aaKnown RBP19.53■□□□□ 0.72
PCBP4-216ENST00000497390 TOB2Q14106 344 aaPredicted RBP19.52■□□□□ 0.72
PCBP4-216ENST00000497390 TTC6Q86TZ1 520 aa19.52■□□□□ 0.72
PCBP4-216ENST00000497390 SLC52A2Q9HAB3 445 aa19.52■□□□□ 0.72
PCBP4-216ENST00000497390 ADCY5O95622 1261 aa19.52■□□□□ 0.71
PCBP4-216ENST00000497390 ZKSCAN1P17029 563 aaPredicted RBP19.52■□□□□ 0.71
PCBP4-216ENST00000497390 CHRNA2Q15822 529 aa19.52■□□□□ 0.71
PCBP4-216ENST00000497390 LRP10Q7Z4F1 713 aa19.52■□□□□ 0.71
PCBP4-216ENST00000497390 FUCA2Q9BTY2 467 aa19.52■□□□□ 0.71
PCBP4-216ENST00000497390 TM6SF1Q9BZW5 370 aa19.52■□□□□ 0.71
PCBP4-216ENST00000497390 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
PCBP4-216ENST00000497390 MEGF6O75095 1541 aa19.51■□□□□ 0.71
PCBP4-216ENST00000497390 TRPM3Q9HCF6 1732 aaPredicted RBP19.51■□□□□ 0.71
PCBP4-216ENST00000497390 DDX58O95786 925 aaKnown RBP19.51■□□□□ 0.71
PCBP4-216ENST00000497390 TPM2P07951 284 aa19.51■□□□□ 0.71
PCBP4-216ENST00000497390 TFCP2Q12800 502 aa19.51■□□□□ 0.71
PCBP4-216ENST00000497390 UBE3BQ7Z3V4 1068 aa19.51■□□□□ 0.71
PCBP4-216ENST00000497390 LARP1BQ659C4 914 aaKnown RBP19.51■□□□□ 0.71
PCBP4-216ENST00000497390 MED23Q9ULK4 1368 aa19.5■□□□□ 0.71
PCBP4-216ENST00000497390 PHF14O94880 888 aa19.5■□□□□ 0.71
PCBP4-216ENST00000497390 CAMK4Q16566 473 aa19.5■□□□□ 0.71
PCBP4-216ENST00000497390 LRRC2Q9BYS8 371 aa19.5■□□□□ 0.71
PCBP4-216ENST00000497390 TFIP11Q9UBB9 837 aaKnown RBP19.5■□□□□ 0.71
PCBP4-216ENST00000497390 PHKG2P15735 406 aa19.5■□□□□ 0.71
PCBP4-216ENST00000497390 LIG1P18858 919 aa19.5■□□□□ 0.71
PCBP4-216ENST00000497390 CAMTA1Q9Y6Y1 1673 aa19.49■□□□□ 0.71
PCBP4-216ENST00000497390 JAK2O60674 1132 aa19.49■□□□□ 0.71
PCBP4-216ENST00000497390 PTPN12Q05209 780 aaKnown RBP19.49■□□□□ 0.71
PCBP4-216ENST00000497390 LARP1Q6PKG0 1096 aaKnown RBP19.49■□□□□ 0.71
PCBP4-216ENST00000497390 CHMP4AQ9BY43 222 aa19.49■□□□□ 0.71
PCBP4-216ENST00000497390 SCN11AQ9UI33 1791 aa19.49■□□□□ 0.71
PCBP4-216ENST00000497390 PPFIA3O75145 1194 aa19.49■□□□□ 0.71
PCBP4-216ENST00000497390 RFX5P48382 616 aaPredicted RBP19.49■□□□□ 0.71
PCBP4-216ENST00000497390 RAPGEF4Q8WZA2 1011 aa19.49■□□□□ 0.71
PCBP4-216ENST00000497390 DNAJC2Q99543 621 aaKnown RBP19.49■□□□□ 0.71
PCBP4-216ENST00000497390 DBNDD2Q9BQY9 259 aa19.49■□□□□ 0.71
PCBP4-216ENST00000497390 METTL22Q9BUU2 404 aaPredicted RBP19.49■□□□□ 0.71
PCBP4-216ENST00000497390 SH2B1Q9NRF2 756 aaPredicted RBP19.49■□□□□ 0.71
PCBP4-216ENST00000497390 UQCRHLA0A096LP55 91 aa19.48■□□□□ 0.71
PCBP4-216ENST00000497390 A0A0G2JLW4 131 aa19.48■□□□□ 0.71
PCBP4-216ENST00000497390 RRP9O43818 475 aaKnown RBP19.48■□□□□ 0.71
PCBP4-216ENST00000497390 TAF5LO75529 589 aa19.48■□□□□ 0.71
PCBP4-216ENST00000497390 UQCRHP07919 91 aa19.48■□□□□ 0.71
PCBP4-216ENST00000497390 BLOC1S2Q6QNY1 142 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms