RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
USP13-205ENST00000497380 GPTP24298 496 aa13.15□□□□□ -0.3
USP13-205ENST00000497380 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
USP13-205ENST00000497380 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
USP13-205ENST00000497380 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
USP13-205ENST00000497380 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.3
USP13-205ENST00000497380 USP44Q9H0E7 712 aa13.15□□□□□ -0.3
USP13-205ENST00000497380 BCL2L12Q9HB09 334 aa13.15□□□□□ -0.3
USP13-205ENST00000497380 BCORQ6W2J9 1755 aa13.15□□□□□ -0.31
USP13-205ENST00000497380 QSER1Q2KHR3 1735 aa13.14□□□□□ -0.31
USP13-205ENST00000497380 NUP98P52948 1817 aa13.14□□□□□ -0.31
USP13-205ENST00000497380 GNAI2P04899 355 aa13.14□□□□□ -0.31
USP13-205ENST00000497380 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
USP13-205ENST00000497380 GTF2E1P29083 439 aaPredicted RBP13.14□□□□□ -0.31
USP13-205ENST00000497380 TPTE2Q6XPS3 522 aa13.14□□□□□ -0.31
USP13-205ENST00000497380 ZBTB38Q8NAP3 1195 aaPredicted RBP13.14□□□□□ -0.31
USP13-205ENST00000497380 EXOC6Q8TAG9 804 aa13.14□□□□□ -0.31
USP13-205ENST00000497380 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
USP13-205ENST00000497380 UTYO14607 1347 aa13.13□□□□□ -0.31
USP13-205ENST00000497380 N4BP2Q86UW6 1770 aaPredicted RBP13.13□□□□□ -0.31
USP13-205ENST00000497380 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
USP13-205ENST00000497380 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
USP13-205ENST00000497380 H7C1W4 665 aa13.13□□□□□ -0.31
USP13-205ENST00000497380 NPHP1O15259 732 aa13.13□□□□□ -0.31
USP13-205ENST00000497380 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
USP13-205ENST00000497380 BICDL1Q6ZP65 573 aa13.13□□□□□ -0.31
USP13-205ENST00000497380 ZBTB40Q9NUA8 1239 aa13.13□□□□□ -0.31
USP13-205ENST00000497380 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
USP13-205ENST00000497380 ANKRD36CQ5JPF3 1778 aa13.12□□□□□ -0.31
USP13-205ENST00000497380 NBPF5PQ86XG9 351 aaPredicted RBP13.12□□□□□ -0.31
USP13-205ENST00000497380 MEIS3Q99687 375 aa13.12□□□□□ -0.31
USP13-205ENST00000497380 PPP1R1BQ9UD71 204 aaPredicted RBP13.12□□□□□ -0.31
USP13-205ENST00000497380 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
USP13-205ENST00000497380 CDHR2Q9BYE9 1310 aa13.12□□□□□ -0.31
USP13-205ENST00000497380 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
USP13-205ENST00000497380 TM4SF1P30408 202 aa13.11□□□□□ -0.31
USP13-205ENST00000497380 NFIXQ14938 502 aa13.11□□□□□ -0.31
USP13-205ENST00000497380 SUSD4Q5VX71 490 aa13.11□□□□□ -0.31
USP13-205ENST00000497380 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
USP13-205ENST00000497380 RPAP2Q8IXW5 612 aaPredicted RBP13.11□□□□□ -0.31
USP13-205ENST00000497380 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
USP13-205ENST00000497380 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
USP13-205ENST00000497380 UBN2Q6ZU65 1347 aa13.11□□□□□ -0.31
USP13-205ENST00000497380 FAM89AQ96GI7 184 aa13.1□□□□□ -0.31
USP13-205ENST00000497380 TUBGCP6Q96RT7 1819 aa13.1□□□□□ -0.31
USP13-205ENST00000497380 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 PDE8AO60658 829 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 HMMRO75330 724 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 NTSR2O95665 410 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 SERPINB2P05120 415 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 ST5P78524 1137 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 CNBD1Q8NA66 436 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 PLA2G12BQ9BX93 195 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 SPON1Q9HCB6 807 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
USP13-205ENST00000497380 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
USP13-205ENST00000497380 RTL5Q5HYW3 569 aaPredicted RBP13.08□□□□□ -0.32
USP13-205ENST00000497380 SLC10A5Q5PT55 438 aa13.08□□□□□ -0.32
USP13-205ENST00000497380 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
USP13-205ENST00000497380 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
USP13-205ENST00000497380 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
USP13-205ENST00000497380 MMP10P09238 476 aa13.07□□□□□ -0.32
USP13-205ENST00000497380 POLD1P28340 1107 aa13.07□□□□□ -0.32
USP13-205ENST00000497380 CASP7P55210 303 aa13.07□□□□□ -0.32
USP13-205ENST00000497380 ATP8B2P98198 1209 aa13.07□□□□□ -0.32
USP13-205ENST00000497380 ZNF784Q8NCA9 323 aaPredicted RBP13.07□□□□□ -0.32
USP13-205ENST00000497380 SUCLG2Q96I99 432 aa13.07□□□□□ -0.32
USP13-205ENST00000497380 NLRP3Q96P20 1036 aa13.07□□□□□ -0.32
USP13-205ENST00000497380 RWDD1Q9H446 243 aaPredicted RBP13.07□□□□□ -0.32
USP13-205ENST00000497380 MTX1Q13505 466 aa13.06□□□□□ -0.32
USP13-205ENST00000497380 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
USP13-205ENST00000497380 ANKRD44Q8N8A2 993 aa13.06□□□□□ -0.32
USP13-205ENST00000497380 BICC1Q9H694 974 aaKnown RBP13.06□□□□□ -0.32
USP13-205ENST00000497380 GTF3C3Q9Y5Q9 886 aa13.06□□□□□ -0.32
USP13-205ENST00000497380 RABL6Q3YEC7 729 aaPredicted RBP13.05□□□□□ -0.32
USP13-205ENST00000497380 ERFEQ4G0M1 354 aa13.05□□□□□ -0.32
USP13-205ENST00000497380 CCDC152Q4G0S7 254 aa13.05□□□□□ -0.32
USP13-205ENST00000497380 PRR5LQ6MZQ0 368 aa13.05□□□□□ -0.32
USP13-205ENST00000497380 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
USP13-205ENST00000497380 NUTM1Q86Y26 1132 aa13.05□□□□□ -0.32
USP13-205ENST00000497380 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
USP13-205ENST00000497380 CCDC136Q96JN2 1154 aa13.05□□□□□ -0.32
USP13-205ENST00000497380 C1orf115Q9H7X2 142 aa13.05□□□□□ -0.32
USP13-205ENST00000497380 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
USP13-205ENST00000497380 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
USP13-205ENST00000497380 SRGAP3O43295 1099 aa13.04□□□□□ -0.32
USP13-205ENST00000497380 CSF1RP07333 972 aa13.04□□□□□ -0.32
USP13-205ENST00000497380 CTSWP56202 376 aa13.04□□□□□ -0.32
USP13-205ENST00000497380 FOXO4P98177 505 aa13.04□□□□□ -0.32
USP13-205ENST00000497380 DDR1Q08345 913 aa13.04□□□□□ -0.32
USP13-205ENST00000497380 HDAC1Q13547 482 aaPredicted RBP13.04□□□□□ -0.32
USP13-205ENST00000497380 CCDC57Q2TAC2 916 aa13.04□□□□□ -0.32
USP13-205ENST00000497380 LMBR1LQ6UX01 489 aa13.04□□□□□ -0.32
USP13-205ENST00000497380 PCDHB15Q9Y5E8 787 aa13.04□□□□□ -0.32
USP13-205ENST00000497380 RIC1Q4ADV7 1423 aa13.04□□□□□ -0.32
USP13-205ENST00000497380 HCLS1P14317 486 aaPredicted RBP13.03□□□□□ -0.32
USP13-205ENST00000497380 PDE6BP35913 854 aa13.03□□□□□ -0.32
USP13-205ENST00000497380 IFIT5Q13325 482 aaKnown RBP13.03□□□□□ -0.32
USP13-205ENST00000497380 SF3B3Q15393 1217 aaKnown RBP13.03□□□□□ -0.32
USP13-205ENST00000497380 TTLL11Q8NHH1 800 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms