RNA–Protein interactions for RNA: ENST00000497210.5

CTPS1-211, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-211ENST00000497210 TEFQ10587 303 aa12.6□□□□□ -0.39
CTPS1-211ENST00000497210 IFT57Q9NWB7 429 aa12.6□□□□□ -0.39
CTPS1-211ENST00000497210 KDM6AO15550 1401 aaPredicted RBP12.6□□□□□ -0.39
CTPS1-211ENST00000497210 SENP3-EIF4A1A0A087X0R7 540 aa12.59□□□□□ -0.39
CTPS1-211ENST00000497210 GNAI1P63096 354 aa12.59□□□□□ -0.39
CTPS1-211ENST00000497210 SH3D19Q5HYK7 790 aa12.59□□□□□ -0.39
CTPS1-211ENST00000497210 SEPT9Q9UHD8 586 aaPredicted RBP12.59□□□□□ -0.39
CTPS1-211ENST00000497210 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
CTPS1-211ENST00000497210 KDM3BQ7LBC6 1761 aa12.58□□□□□ -0.39
CTPS1-211ENST00000497210 CYP27B1O15528 508 aa12.58□□□□□ -0.4
CTPS1-211ENST00000497210 CD46P15529 392 aa12.58□□□□□ -0.4
CTPS1-211ENST00000497210 MCM10Q7L590 875 aa12.58□□□□□ -0.4
CTPS1-211ENST00000497210 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
CTPS1-211ENST00000497210 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
CTPS1-211ENST00000497210 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
CTPS1-211ENST00000497210 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
CTPS1-211ENST00000497210 TK2O00142 265 aa12.57□□□□□ -0.4
CTPS1-211ENST00000497210 MPRIPQ6WCQ1 1025 aa12.57□□□□□ -0.4
CTPS1-211ENST00000497210 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
CTPS1-211ENST00000497210 BCL9O00512 1426 aa12.56□□□□□ -0.4
CTPS1-211ENST00000497210 ERVV-2B6SEH9 535 aa12.56□□□□□ -0.4
CTPS1-211ENST00000497210 RNMTO43148 476 aaKnown RBP12.56□□□□□ -0.4
CTPS1-211ENST00000497210 RXRBP28702 533 aa12.56□□□□□ -0.4
CTPS1-211ENST00000497210 BHMG1C9JSJ3 638 aaPredicted RBP12.55□□□□□ -0.4
CTPS1-211ENST00000497210 CABP4P57796 275 aa12.55□□□□□ -0.4
CTPS1-211ENST00000497210 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
CTPS1-211ENST00000497210 THUMPD2Q9BTF0 503 aaKnown RBP12.55□□□□□ -0.4
CTPS1-211ENST00000497210 TSPYL4Q9UJ04 414 aa12.55□□□□□ -0.4
CTPS1-211ENST00000497210 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
CTPS1-211ENST00000497210 FANCIQ9NVI1 1328 aa12.55□□□□□ -0.4
CTPS1-211ENST00000497210 RGS12O14924 1447 aa12.54□□□□□ -0.4
CTPS1-211ENST00000497210 ITGB4P16144 1822 aa12.54□□□□□ -0.4
CTPS1-211ENST00000497210 DDX11L8A8MPP1 907 aa12.54□□□□□ -0.4
CTPS1-211ENST00000497210 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
CTPS1-211ENST00000497210 TAF7Q15545 349 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-211ENST00000497210 SEPT12Q8IYM1 358 aa12.54□□□□□ -0.4
CTPS1-211ENST00000497210 IL17REQ8NFR9 667 aa12.54□□□□□ -0.4
CTPS1-211ENST00000497210 SLC52A2Q9HAB3 445 aa12.54□□□□□ -0.4
CTPS1-211ENST00000497210 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
CTPS1-211ENST00000497210 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
CTPS1-211ENST00000497210 CT47B1P0C2W7 299 aaPredicted RBP12.53□□□□□ -0.4
CTPS1-211ENST00000497210 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
CTPS1-211ENST00000497210 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
CTPS1-211ENST00000497210 TTC5Q8N0Z6 440 aa12.53□□□□□ -0.4
CTPS1-211ENST00000497210 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
CTPS1-211ENST00000497210 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
CTPS1-211ENST00000497210 LAMB4A4D0S4 1761 aa12.52□□□□□ -0.41
CTPS1-211ENST00000497210 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
CTPS1-211ENST00000497210 SKIV2LQ15477 1246 aaKnown RBP12.52□□□□□ -0.41
CTPS1-211ENST00000497210 SWT1Q5T5J6 900 aaKnown RBP12.52□□□□□ -0.41
CTPS1-211ENST00000497210 MYSM1Q5VVJ2 828 aa12.52□□□□□ -0.41
CTPS1-211ENST00000497210 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
CTPS1-211ENST00000497210 CHMP4AQ9BY43 222 aa12.52□□□□□ -0.41
CTPS1-211ENST00000497210 SOS1Q07889 1333 aaPredicted RBP12.52□□□□□ -0.41
CTPS1-211ENST00000497210 CHL1O00533 1208 aa12.51□□□□□ -0.41
CTPS1-211ENST00000497210 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
CTPS1-211ENST00000497210 ADGRD1Q6QNK2 874 aa12.51□□□□□ -0.41
CTPS1-211ENST00000497210 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
CTPS1-211ENST00000497210 KRT27Q7Z3Y8 459 aa12.51□□□□□ -0.41
CTPS1-211ENST00000497210 MARCH10Q8NA82 808 aaPredicted RBP12.51□□□□□ -0.41
CTPS1-211ENST00000497210 PCMTD1Q96MG8 357 aaPredicted RBP12.51□□□□□ -0.41
CTPS1-211ENST00000497210 TBC1D2Q9BYX2 928 aa12.51□□□□□ -0.41
CTPS1-211ENST00000497210 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
CTPS1-211ENST00000497210 MBIPQ9NS73 344 aa12.51□□□□□ -0.41
CTPS1-211ENST00000497210 MMRN1Q13201 1228 aa12.5□□□□□ -0.41
CTPS1-211ENST00000497210 TRMT2AQ8IZ69 625 aaKnown RBP12.5□□□□□ -0.41
CTPS1-211ENST00000497210 TSR2Q969E8 191 aaKnown RBP12.5□□□□□ -0.41
CTPS1-211ENST00000497210 SYTL4Q96C24 671 aaPredicted RBP12.5□□□□□ -0.41
CTPS1-211ENST00000497210 SBF2Q86WG5 1849 aa12.49□□□□□ -0.41
CTPS1-211ENST00000497210 DIXDC1Q155Q3 683 aa12.49□□□□□ -0.41
CTPS1-211ENST00000497210 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
CTPS1-211ENST00000497210 ZNF428Q96B54 188 aa12.49□□□□□ -0.41
CTPS1-211ENST00000497210 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
CTPS1-211ENST00000497210 HOXB7P09629 217 aa12.48□□□□□ -0.41
CTPS1-211ENST00000497210 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
CTPS1-211ENST00000497210 RDH13Q8NBN7 331 aa12.48□□□□□ -0.41
CTPS1-211ENST00000497210 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
CTPS1-211ENST00000497210 RGS17Q9UGC6 210 aaPredicted RBP12.48□□□□□ -0.41
CTPS1-211ENST00000497210 BTAF1O14981 1849 aa12.48□□□□□ -0.41
CTPS1-211ENST00000497210 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
CTPS1-211ENST00000497210 HRO43593 1189 aa12.47□□□□□ -0.41
CTPS1-211ENST00000497210 SLC10A3P09131 477 aa12.47□□□□□ -0.41
CTPS1-211ENST00000497210 ZNF790Q6PG37 636 aa12.47□□□□□ -0.41
CTPS1-211ENST00000497210 POTEAQ6S8J7 498 aa12.47□□□□□ -0.41
CTPS1-211ENST00000497210 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
CTPS1-211ENST00000497210 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
CTPS1-211ENST00000497210 C5P01031 1676 aa12.46□□□□□ -0.41
CTPS1-211ENST00000497210 ZNF831Q5JPB2 1677 aa12.46□□□□□ -0.41
CTPS1-211ENST00000497210 CLK2P49760 499 aaKnown RBP12.46□□□□□ -0.41
CTPS1-211ENST00000497210 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
CTPS1-211ENST00000497210 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.41
CTPS1-211ENST00000497210 SAMD7Q7Z3H4 446 aa12.46□□□□□ -0.41
CTPS1-211ENST00000497210 SMARCC1Q92922 1105 aaPredicted RBP12.46□□□□□ -0.41
CTPS1-211ENST00000497210 POLR3EQ9NVU0 708 aa12.46□□□□□ -0.41
CTPS1-211ENST00000497210 ACSBG1Q96GR2 724 aa12.45□□□□□ -0.42
CTPS1-211ENST00000497210 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
CTPS1-211ENST00000497210 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTPS1-211ENST00000497210 KAT6BQ8WYB5 2073 aa12.45□□□□□ -0.42
CTPS1-211ENST00000497210 RGPD3A6NKT7 1758 aaPredicted RBP12.45□□□□□ -0.42
CTPS1-211ENST00000497210 RGPD4Q7Z3J3 1758 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms