RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TBC1D8BQ0IIM8 1120 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 LYPD4Q6UWN0 246 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 RGL4Q8IZJ4 473 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 PGBD3Q8N328 593 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 SLC30A3Q99726 388 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 SERPINA10Q9UK55 444 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 IGF1RP08069 1367 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 GTF2E1P29083 439 aaPredicted RBP4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 SERPINB4P48594 390 aa4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 SNRPNP63162 240 aaKnown RBP4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 COX20Q5RI15 118 aa4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 BRD7Q9NPI1 651 aa4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 KLF15Q9UIH9 416 aa4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 ZNF211Q13398 564 aaPredicted RBP4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 EFHC2Q5JST6 749 aa4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 RHPN1Q8TCX5 695 aa4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 ACDQ96AP0 544 aa4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 CEP63Q96MT8 703 aa4.17□□□□□ -1.74
SNRNP48-202ENST00000496946 SHISA8B8ZZ34 492 aa4.16□□□□□ -1.74
SNRNP48-202ENST00000496946 CANXP27824 592 aaKnown RBP4.16□□□□□ -1.74
SNRNP48-202ENST00000496946 ANAPC15P60006 121 aa4.16□□□□□ -1.74
SNRNP48-202ENST00000496946 SUSD3Q96L08 255 aa4.16□□□□□ -1.74
SNRNP48-202ENST00000496946 GJA3Q9Y6H8 435 aa4.16□□□□□ -1.74
SNRNP48-202ENST00000496946 TARSP26639 723 aaKnown RBP4.16□□□□□ -1.74
SNRNP48-202ENST00000496946 TYRO3Q06418 890 aa4.16□□□□□ -1.74
SNRNP48-202ENST00000496946 C8orf86Q6ZUL3 223 aa4.16□□□□□ -1.74
SNRNP48-202ENST00000496946 NANOS1Q8WY41 292 aaKnown RBP4.16□□□□□ -1.74
SNRNP48-202ENST00000496946 WIPF1O43516 503 aa4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 TATP17735 454 aaPredicted RBP4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 FGFR3P22607 806 aa4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 CNGB1Q14028 1251 aaPredicted RBP4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 ZNF385CQ66K41 422 aaPredicted RBP4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 ZSCAN1Q8NBB4 408 aa4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 DNAJC2Q99543 621 aaKnown RBP4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 NDFIP2Q9NV92 336 aa4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 KCNG1Q9UIX4 513 aa4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 GGA1Q9UJY5 639 aa4.15□□□□□ -1.74
SNRNP48-202ENST00000496946 ATXN7O15265 892 aaPredicted RBP4.15□□□□□ -1.75
SNRNP48-202ENST00000496946 MAFGO15525 162 aa4.15□□□□□ -1.75
SNRNP48-202ENST00000496946 ATP2B4P23634 1241 aa4.15□□□□□ -1.75
SNRNP48-202ENST00000496946 MLLT1Q03111 559 aaPredicted RBP4.15□□□□□ -1.75
SNRNP48-202ENST00000496946 TNP2Q05952 138 aa4.15□□□□□ -1.75
SNRNP48-202ENST00000496946 TEAD4Q15561 434 aa4.15□□□□□ -1.75
SNRNP48-202ENST00000496946 CCDC27Q2M243 656 aa4.15□□□□□ -1.75
SNRNP48-202ENST00000496946 CRISPLD1Q9H336 500 aa4.15□□□□□ -1.75
SNRNP48-202ENST00000496946 RBAK-RBAKDNI3L0D1 243 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 ATG7O95352 703 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 ABL1P00519 1130 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 BMP4P12644 408 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 FAM193AP78312 1265 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 TRIP4Q15650 581 aaPredicted RBP4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 FAM43BQ6ZT52 329 aaPredicted RBP4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 BTLAQ7Z6A9 289 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 GPATCH11Q8N954 259 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 GALNT6Q8NCL4 622 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 FCHSD1Q86WN1 690 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 BHMTQ93088 406 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 TRAIPQ9BWF2 469 aa4.14□□□□□ -1.75
SNRNP48-202ENST00000496946 H7C1W4 665 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 LZTS3O60299 673 aaPredicted RBP4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 HFE2Q6ZVN8 426 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 NPAS3Q8IXF0 933 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 CXXC1Q9P0U4 656 aaPredicted RBP4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 PLAURQ03405 335 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 WDR44Q5JSH3 913 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 SYT9Q86SS6 491 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 CCDC125Q86Z20 511 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 TRERF1Q96PN7 1200 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 ZFATQ9P243 1243 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 NAGPAQ9UK23 515 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 PCDHGC4Q9Y5F7 938 aa4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 DNMT3AQ9Y6K1 912 aaPredicted RBP4.13□□□□□ -1.75
SNRNP48-202ENST00000496946 OPLAHO14841 1288 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 CLGNO14967 610 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 EFSO43281 561 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 CELA2BP08218 269 aaPredicted RBP4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 IDH3AP50213 366 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 TREML1Q86YW5 311 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 OXCT2Q9BYC2 517 aaPredicted RBP4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 TNFRSF10BO14763 440 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 SASH3O75995 380 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 OS9Q13438 667 aaPredicted RBP4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 GPR152Q8TDT2 470 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 GTF3C2Q8WUA4 911 aaPredicted RBP4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 NSUN5Q96P11 429 aaKnown RBP4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 MBIPQ9NS73 344 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 DMGDHQ9UI17 866 aaKnown RBP4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 CNTNAP5Q8WYK1 1306 aa4.12□□□□□ -1.75
SNRNP48-202ENST00000496946 PATL2C9JE40 543 aaKnown RBP4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 TRPA1O75762 1119 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 NFKB1P19838 968 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 MPSTP25325 297 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 SPEM2Q0P670 501 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 POTEAQ6S8J7 498 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 ADAMTSL4Q6UY14 1074 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 NUDT8Q8WV74 236 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 ATXN7L1Q9ULK2 861 aaPredicted RBP4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 PRR12Q9ULL5 1215 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 FAM229AH3BQW9 127 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 SLURP2P0DP57 97 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms