RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 PPP1R18Q6NYC8 613 aa11.1□□□□□ -0.63
ITGAV-208ENST00000496854 GGNBP2Q9H3C7 697 aa11.1□□□□□ -0.63
ITGAV-208ENST00000496854 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
ITGAV-208ENST00000496854 UBR3Q6ZT12 1888 aa11.09□□□□□ -0.63
ITGAV-208ENST00000496854 GRIPAP1Q4V328 841 aa11.09□□□□□ -0.63
ITGAV-208ENST00000496854 MORN1Q5T089 497 aa11.09□□□□□ -0.63
ITGAV-208ENST00000496854 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
ITGAV-208ENST00000496854 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
ITGAV-208ENST00000496854 FLT4P35916 1363 aa11.08□□□□□ -0.64
ITGAV-208ENST00000496854 MAP2P11137 1827 aaKnown RBP11.08□□□□□ -0.64
ITGAV-208ENST00000496854 KDM4AO75164 1064 aa11.08□□□□□ -0.64
ITGAV-208ENST00000496854 RGS20O76081 388 aa11.08□□□□□ -0.64
ITGAV-208ENST00000496854 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
ITGAV-208ENST00000496854 GGCXP38435 758 aa11.08□□□□□ -0.64
ITGAV-208ENST00000496854 NLGN2Q8NFZ4 835 aa11.08□□□□□ -0.64
ITGAV-208ENST00000496854 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
ITGAV-208ENST00000496854 NSD3Q9BZ95 1437 aa11.08□□□□□ -0.64
ITGAV-208ENST00000496854 INSRP06213 1382 aa11.07□□□□□ -0.64
ITGAV-208ENST00000496854 FYB1O15117 783 aa11.07□□□□□ -0.64
ITGAV-208ENST00000496854 SLC16A10Q8TF71 515 aa11.07□□□□□ -0.64
ITGAV-208ENST00000496854 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.07□□□□□ -0.64
ITGAV-208ENST00000496854 CCNL1Q9UK58 526 aaPredicted RBP11.07□□□□□ -0.64
ITGAV-208ENST00000496854 PALLDQ8WX93 1383 aa11.06□□□□□ -0.64
ITGAV-208ENST00000496854 GIGYF2Q6Y7W6 1299 aaKnown RBP11.06□□□□□ -0.64
ITGAV-208ENST00000496854 TFCP2L1Q9NZI6 479 aa11.06□□□□□ -0.64
ITGAV-208ENST00000496854 SLC27A5Q9Y2P5 690 aa11.06□□□□□ -0.64
ITGAV-208ENST00000496854 ADH1BP00325 375 aa11.05□□□□□ -0.64
ITGAV-208ENST00000496854 POLD1P28340 1107 aa11.05□□□□□ -0.64
ITGAV-208ENST00000496854 TMF1P82094 1093 aa11.05□□□□□ -0.64
ITGAV-208ENST00000496854 HSP90AB2PQ58FF8 381 aa11.05□□□□□ -0.64
ITGAV-208ENST00000496854 NUTM1Q86Y26 1132 aa11.05□□□□□ -0.64
ITGAV-208ENST00000496854 PCDH11XQ9BZA7 1347 aa11.05□□□□□ -0.64
ITGAV-208ENST00000496854 PCDH11YQ9BZA8 1340 aa11.05□□□□□ -0.64
ITGAV-208ENST00000496854 KIF24Q5T7B8 1368 aa11.04□□□□□ -0.64
ITGAV-208ENST00000496854 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
ITGAV-208ENST00000496854 COL23A1Q86Y22 540 aaPredicted RBP11.04□□□□□ -0.64
ITGAV-208ENST00000496854 PARP9Q8IXQ6 854 aa11.04□□□□□ -0.64
ITGAV-208ENST00000496854 RAPGEF4Q8WZA2 1011 aa11.04□□□□□ -0.64
ITGAV-208ENST00000496854 SPSB2Q99619 263 aa11.04□□□□□ -0.64
ITGAV-208ENST00000496854 EMILIN1Q9Y6C2 1016 aa11.04□□□□□ -0.64
ITGAV-208ENST00000496854 CGNL1Q0VF96 1302 aa11.04□□□□□ -0.64
ITGAV-208ENST00000496854 CYP27B1O15528 508 aa11.03□□□□□ -0.64
ITGAV-208ENST00000496854 YBX3P16989 372 aaKnown RBP eCLIP11.03□□□□□ -0.64
ITGAV-208ENST00000496854 TATP17735 454 aaPredicted RBP11.03□□□□□ -0.64
ITGAV-208ENST00000496854 USP46P62068 366 aa11.03□□□□□ -0.64
ITGAV-208ENST00000496854 GPR162Q16538 588 aa11.03□□□□□ -0.64
ITGAV-208ENST00000496854 AMIGO3Q86WK7 504 aa11.03□□□□□ -0.64
ITGAV-208ENST00000496854 KIAA1551Q9HCM1 1747 aa11.03□□□□□ -0.64
ITGAV-208ENST00000496854 FMNL1O95466 1100 aaPredicted RBP11.02□□□□□ -0.65
ITGAV-208ENST00000496854 S1PR4O95977 384 aa11.02□□□□□ -0.65
ITGAV-208ENST00000496854 CARD14Q9BXL6 1004 aa11.02□□□□□ -0.65
ITGAV-208ENST00000496854 COL5A3P25940 1745 aaPredicted RBP11.01□□□□□ -0.65
ITGAV-208ENST00000496854 SENP3-EIF4A1A0A087X0R7 540 aa11.01□□□□□ -0.65
ITGAV-208ENST00000496854 C1QTNF8P60827 252 aa11.01□□□□□ -0.65
ITGAV-208ENST00000496854 PDE4DQ08499 809 aa11.01□□□□□ -0.65
ITGAV-208ENST00000496854 SLC6A16Q9GZN6 736 aa11.01□□□□□ -0.65
ITGAV-208ENST00000496854 C4AP0C0L4 1744 aa11.01□□□□□ -0.65
ITGAV-208ENST00000496854 CICQ96RK0 1608 aaPredicted RBP11□□□□□ -0.65
ITGAV-208ENST00000496854 HOXA2O43364 376 aa11□□□□□ -0.65
ITGAV-208ENST00000496854 SMIM5Q71RC9 77 aa11□□□□□ -0.65
ITGAV-208ENST00000496854 ZNF831Q5JPB2 1677 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 RNF223E7ERA6 249 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 Q3C1V9 767 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 MPRIPQ6WCQ1 1025 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 HLA-CQ95604 372 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 THAP11Q96EK4 314 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 BEGAINQ9BUH8 593 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 KIF13BQ9NQT8 1826 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 ADCY9O60503 1353 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 ATP10DQ9P241 1426 aa10.99□□□□□ -0.65
ITGAV-208ENST00000496854 CEP350Q5VT06 3117 aa10.98□□□□□ -0.65
ITGAV-208ENST00000496854 PPEF1O14829 653 aaPredicted RBP10.98□□□□□ -0.65
ITGAV-208ENST00000496854 GIGYF1O75420 1035 aaPredicted RBP10.98□□□□□ -0.65
ITGAV-208ENST00000496854 PRKD2Q9BZL6 878 aa10.98□□□□□ -0.65
ITGAV-208ENST00000496854 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
ITGAV-208ENST00000496854 KDRP35968 1356 aa10.98□□□□□ -0.65
ITGAV-208ENST00000496854 MS4A1P11836 297 aa10.97□□□□□ -0.65
ITGAV-208ENST00000496854 GUCA2AQ02747 115 aa10.97□□□□□ -0.65
ITGAV-208ENST00000496854 BRICD5Q6PL45 260 aa10.97□□□□□ -0.65
ITGAV-208ENST00000496854 RNF19BQ6ZMZ0 732 aa10.97□□□□□ -0.65
ITGAV-208ENST00000496854 PIGBQ92521 554 aa10.97□□□□□ -0.65
ITGAV-208ENST00000496854 N4BP2Q86UW6 1770 aaPredicted RBP10.96□□□□□ -0.65
ITGAV-208ENST00000496854 TJP1Q07157 1748 aa10.96□□□□□ -0.65
ITGAV-208ENST00000496854 PPM1GO15355 546 aaPredicted RBP10.96□□□□□ -0.65
ITGAV-208ENST00000496854 CDCA8Q53HL2 280 aa10.96□□□□□ -0.65
ITGAV-208ENST00000496854 LINC00116Q8NCU8 138 aa10.96□□□□□ -0.65
ITGAV-208ENST00000496854 SPIRE2Q8WWL2 714 aa10.96□□□□□ -0.65
ITGAV-208ENST00000496854 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
ITGAV-208ENST00000496854 WASHC2AQ641Q2 1341 aa10.95□□□□□ -0.66
ITGAV-208ENST00000496854 WWC3Q9ULE0 1092 aa10.95□□□□□ -0.66
ITGAV-208ENST00000496854 PXDNLA1KZ92 1463 aa10.94□□□□□ -0.66
ITGAV-208ENST00000496854 KDM6AO15550 1401 aaPredicted RBP10.94□□□□□ -0.66
ITGAV-208ENST00000496854 IGSF1Q8N6C5 1336 aa10.94□□□□□ -0.66
ITGAV-208ENST00000496854 ITPK1Q13572 414 aa10.94□□□□□ -0.66
ITGAV-208ENST00000496854 FAM160A2Q8N612 972 aaPredicted RBP10.94□□□□□ -0.66
ITGAV-208ENST00000496854 ANKLE1Q8NAG6 615 aa10.94□□□□□ -0.66
ITGAV-208ENST00000496854 SMARCC1Q92922 1105 aaPredicted RBP10.94□□□□□ -0.66
ITGAV-208ENST00000496854 POLKQ9UBT6 870 aa10.94□□□□□ -0.66
ITGAV-208ENST00000496854 LOC102724428A0A0B4J2F2 783 aa10.93□□□□□ -0.66
ITGAV-208ENST00000496854 GRIN3BO60391 1043 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms