RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 C11orf91Q3C1V1 193 aa12.07□□□□□ -0.48
TARDBP-210ENST00000496840 SLC30A3Q99726 388 aa12.07□□□□□ -0.48
TARDBP-210ENST00000496840 KLK14Q9P0G3 267 aa12.07□□□□□ -0.48
TARDBP-210ENST00000496840 SIN3BO75182 1162 aa12.06□□□□□ -0.48
TARDBP-210ENST00000496840 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
TARDBP-210ENST00000496840 SYT9Q86SS6 491 aa12.06□□□□□ -0.48
TARDBP-210ENST00000496840 BEND7Q8N7W2 519 aaPredicted RBP12.06□□□□□ -0.48
TARDBP-210ENST00000496840 LRFN2Q9ULH4 789 aa12.06□□□□□ -0.48
TARDBP-210ENST00000496840 PHF20L1A8MW92 1017 aa12.05□□□□□ -0.48
TARDBP-210ENST00000496840 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
TARDBP-210ENST00000496840 KANK3Q6NY19 840 aa12.05□□□□□ -0.48
TARDBP-210ENST00000496840 EFCC1Q9HA90 598 aa12.05□□□□□ -0.48
TARDBP-210ENST00000496840 PTCD1O75127 700 aaKnown RBP12.04□□□□□ -0.48
TARDBP-210ENST00000496840 COX20Q5RI15 118 aa12.04□□□□□ -0.48
TARDBP-210ENST00000496840 BTBD6Q96KE9 485 aa12.04□□□□□ -0.48
TARDBP-210ENST00000496840 MDFIQ99750 246 aa12.04□□□□□ -0.48
TARDBP-210ENST00000496840 EPB42P16452 691 aa12.03□□□□□ -0.48
TARDBP-210ENST00000496840 INPP5BP32019 993 aa12.03□□□□□ -0.48
TARDBP-210ENST00000496840 RASSF7Q02833 373 aa12.03□□□□□ -0.48
TARDBP-210ENST00000496840 TNFRSF25Q93038 417 aa12.03□□□□□ -0.48
TARDBP-210ENST00000496840 SLAIN2Q9P270 581 aa12.03□□□□□ -0.48
TARDBP-210ENST00000496840 ADARB2-AS1A8MUL3 147 aa12.02□□□□□ -0.49
TARDBP-210ENST00000496840 HOXB4P17483 251 aaPredicted RBP12.02□□□□□ -0.49
TARDBP-210ENST00000496840 IDH3AP50213 366 aa12.02□□□□□ -0.49
TARDBP-210ENST00000496840 C11orf16Q9NQ32 467 aa12.02□□□□□ -0.49
TARDBP-210ENST00000496840 CNTNAP5Q8WYK1 1306 aa12.02□□□□□ -0.49
TARDBP-210ENST00000496840 ELOA3CA0A087WX78 387 aaPredicted RBP12.01□□□□□ -0.49
TARDBP-210ENST00000496840 ELOA3DA6NLF2 546 aaPredicted RBP12.01□□□□□ -0.49
TARDBP-210ENST00000496840 AMPD1P23109 780 aa12.01□□□□□ -0.49
TARDBP-210ENST00000496840 IRS1P35568 1242 aa12.01□□□□□ -0.49
TARDBP-210ENST00000496840 SNRPNP63162 240 aaKnown RBP12.01□□□□□ -0.49
TARDBP-210ENST00000496840 ELOA3BQ3SY89 546 aa12.01□□□□□ -0.49
TARDBP-210ENST00000496840 C16orf46Q6P387 395 aa12.01□□□□□ -0.49
TARDBP-210ENST00000496840 CHSY3Q70JA7 882 aa12.01□□□□□ -0.49
TARDBP-210ENST00000496840 ELOA3Q8NG57 546 aa12.01□□□□□ -0.49
TARDBP-210ENST00000496840 IFT43Q96FT9 208 aa12.01□□□□□ -0.49
TARDBP-210ENST00000496840 MKL2Q9ULH7 1088 aa12.01□□□□□ -0.49
TARDBP-210ENST00000496840 MICAL2O94851 1124 aa12□□□□□ -0.49
TARDBP-210ENST00000496840 ATP2B4P23634 1241 aa12□□□□□ -0.49
TARDBP-210ENST00000496840 ARSDP51689 593 aa12□□□□□ -0.49
TARDBP-210ENST00000496840 SUZ12Q15022 739 aaKnown RBP12□□□□□ -0.49
TARDBP-210ENST00000496840 TMEM88BA6NKF7 163 aa11.99□□□□□ -0.49
TARDBP-210ENST00000496840 DGKGP49619 791 aa11.99□□□□□ -0.49
TARDBP-210ENST00000496840 MKNK1Q9BUB5 465 aa11.99□□□□□ -0.49
TARDBP-210ENST00000496840 GSX2Q9BZM3 304 aa11.99□□□□□ -0.49
TARDBP-210ENST00000496840 RRAGCQ9HB90 399 aa11.99□□□□□ -0.49
TARDBP-210ENST00000496840 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
TARDBP-210ENST00000496840 GRNP28799 593 aaKnown RBP11.98□□□□□ -0.49
TARDBP-210ENST00000496840 RAB44Q7Z6P3 723 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-210ENST00000496840 TMEM151AQ8N4L1 468 aa11.98□□□□□ -0.49
TARDBP-210ENST00000496840 SAP130Q9H0E3 1048 aa11.98□□□□□ -0.49
TARDBP-210ENST00000496840 GDF11O95390 407 aa11.97□□□□□ -0.49
TARDBP-210ENST00000496840 ALAS2P22557 587 aa11.97□□□□□ -0.49
TARDBP-210ENST00000496840 CCINQ13939 588 aa11.97□□□□□ -0.49
TARDBP-210ENST00000496840 LINC00114Q6XXX2 140 aa11.97□□□□□ -0.49
TARDBP-210ENST00000496840 BHMTQ93088 406 aa11.97□□□□□ -0.49
TARDBP-210ENST00000496840 PIK3R2O00459 728 aa11.96□□□□□ -0.49
TARDBP-210ENST00000496840 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
TARDBP-210ENST00000496840 CAPN12Q6ZSI9 719 aa11.96□□□□□ -0.49
TARDBP-210ENST00000496840 TREML1Q86YW5 311 aa11.96□□□□□ -0.49
TARDBP-210ENST00000496840 OPLAHO14841 1288 aa11.95□□□□□ -0.5
TARDBP-210ENST00000496840 TNFRSF10BO14763 440 aa11.94□□□□□ -0.5
TARDBP-210ENST00000496840 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-210ENST00000496840 GNB5O14775 395 aa11.93□□□□□ -0.5
TARDBP-210ENST00000496840 ADH7P40394 386 aa11.93□□□□□ -0.5
TARDBP-210ENST00000496840 NAA30Q147X3 362 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-210ENST00000496840 ETFBKMTQ8IXQ9 262 aa11.93□□□□□ -0.5
TARDBP-210ENST00000496840 PNMA5Q96PV4 448 aa11.93□□□□□ -0.5
TARDBP-210ENST00000496840 SUPT5HO00267 1087 aaKnown RBP11.92□□□□□ -0.5
TARDBP-210ENST00000496840 RTCBQ9Y3I0 505 aaKnown RBP11.92□□□□□ -0.5
TARDBP-210ENST00000496840 MAP3K6O95382 1288 aa11.91□□□□□ -0.5
TARDBP-210ENST00000496840 EGFRP00533 1210 aa11.91□□□□□ -0.5
TARDBP-210ENST00000496840 SSFA2P28290 1259 aa11.91□□□□□ -0.5
TARDBP-210ENST00000496840 ALYREFQ86V81 257 aaKnown RBP11.91□□□□□ -0.5
TARDBP-210ENST00000496840 NFKB1P19838 968 aa11.9□□□□□ -0.5
TARDBP-210ENST00000496840 STIM2Q9P246 746 aa11.9□□□□□ -0.5
TARDBP-210ENST00000496840 USTQ9Y2C2 406 aa11.9□□□□□ -0.5
TARDBP-210ENST00000496840 STARD13Q9Y3M8 1113 aa11.9□□□□□ -0.5
TARDBP-210ENST00000496840 FAM26DQ5JW98 314 aa11.89□□□□□ -0.51
TARDBP-210ENST00000496840 DCAF5Q96JK2 942 aa11.89□□□□□ -0.51
TARDBP-210ENST00000496840 UBE2OQ9C0C9 1292 aaKnown RBP11.89□□□□□ -0.51
TARDBP-210ENST00000496840 PRDM6Q9NQX0 595 aa11.89□□□□□ -0.51
TARDBP-210ENST00000496840 RGL4Q8IZJ4 473 aa11.88□□□□□ -0.51
TARDBP-210ENST00000496840 ABTB2Q8N961 1025 aa11.88□□□□□ -0.51
TARDBP-210ENST00000496840 FAM13BQ9NYF5 915 aa11.88□□□□□ -0.51
TARDBP-210ENST00000496840 SEPT3Q9UH03 358 aa11.88□□□□□ -0.51
TARDBP-210ENST00000496840 NOP53Q9NZM5 478 aaKnown RBP11.87□□□□□ -0.51
TARDBP-210ENST00000496840 SLC6A14Q9UN76 642 aa11.87□□□□□ -0.51
TARDBP-210ENST00000496840 KCNMB2Q9Y691 235 aa11.87□□□□□ -0.51
TARDBP-210ENST00000496840 PCSK7Q16549 785 aa11.86□□□□□ -0.51
TARDBP-210ENST00000496840 ZFATQ9P243 1243 aa11.86□□□□□ -0.51
TARDBP-210ENST00000496840 USP20Q9Y2K6 914 aa11.86□□□□□ -0.51
TARDBP-210ENST00000496840 XYLBO75191 536 aa11.85□□□□□ -0.51
TARDBP-210ENST00000496840 ALBP02768 609 aa11.85□□□□□ -0.51
TARDBP-210ENST00000496840 COL8A1P27658 744 aa11.85□□□□□ -0.51
TARDBP-210ENST00000496840 C20orf204Q6ZNR8 217 aa11.85□□□□□ -0.51
TARDBP-210ENST00000496840 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
TARDBP-210ENST00000496840 MICALL1Q8N3F8 863 aa11.85□□□□□ -0.51
TARDBP-210ENST00000496840 KCTD17Q8N5Z5 321 aa11.85□□□□□ -0.51
TARDBP-210ENST00000496840 HELQQ8TDG4 1101 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms