RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 ELL2O00472 640 aaPredicted RBP25.38■■□□□ 1.65
COL20A1-208ENST00000496810 GNAI1P63096 354 aa25.38■■□□□ 1.65
COL20A1-208ENST00000496810 C8orf58Q8NAV2 365 aa25.38■■□□□ 1.65
COL20A1-208ENST00000496810 ZC3H4Q9UPT8 1303 aaKnown RBP25.37■■□□□ 1.65
COL20A1-208ENST00000496810 SYNE4Q8N205 404 aa25.37■■□□□ 1.65
COL20A1-208ENST00000496810 PARP10Q53GL7 1025 aa25.36■■□□□ 1.65
COL20A1-208ENST00000496810 NLRP10Q86W26 655 aa25.36■■□□□ 1.65
COL20A1-208ENST00000496810 TSR2Q969E8 191 aaKnown RBP25.36■■□□□ 1.65
COL20A1-208ENST00000496810 KDM2BQ8NHM5 1336 aa25.36■■□□□ 1.65
COL20A1-208ENST00000496810 WDR90Q96KV7 1748 aa25.35■■□□□ 1.65
COL20A1-208ENST00000496810 CALD1Q05682 793 aaKnown RBP25.35■■□□□ 1.65
COL20A1-208ENST00000496810 CCDC93Q567U6 631 aa25.35■■□□□ 1.65
COL20A1-208ENST00000496810 DBF4Q9UBU7 674 aaPredicted RBP25.35■■□□□ 1.65
COL20A1-208ENST00000496810 PPP1R42Q7Z4L9 355 aa25.34■■□□□ 1.65
COL20A1-208ENST00000496810 TSPYL6Q8N831 410 aa25.34■■□□□ 1.65
COL20A1-208ENST00000496810 UTP14AQ9BVJ6 771 aaKnown RBP25.34■■□□□ 1.65
COL20A1-208ENST00000496810 RRAGCQ9HB90 399 aa25.34■■□□□ 1.65
COL20A1-208ENST00000496810 COL4A1P02462 1669 aa25.33■■□□□ 1.65
COL20A1-208ENST00000496810 COL4A5P29400 1685 aa25.33■■□□□ 1.65
COL20A1-208ENST00000496810 TCIRG1Q13488 830 aa25.33■■□□□ 1.65
COL20A1-208ENST00000496810 SOGA3Q5TF21 947 aa25.33■■□□□ 1.65
COL20A1-208ENST00000496810 WWC1Q8IX03 1113 aa25.33■■□□□ 1.65
COL20A1-208ENST00000496810 HSP90AB3PQ58FF7 597 aa25.32■■□□□ 1.64
COL20A1-208ENST00000496810 PLBD2Q8NHP8 589 aa25.32■■□□□ 1.64
COL20A1-208ENST00000496810 RPGRQ92834 1020 aaKnown RBP25.32■■□□□ 1.64
COL20A1-208ENST00000496810 GLTPD2A6NH11 291 aa25.31■■□□□ 1.64
COL20A1-208ENST00000496810 TOMM70O94826 608 aa25.31■■□□□ 1.64
COL20A1-208ENST00000496810 HOXA10P31260 410 aaPredicted RBP25.31■■□□□ 1.64
COL20A1-208ENST00000496810 CCDC27Q2M243 656 aa25.31■■□□□ 1.64
COL20A1-208ENST00000496810 PHAXQ9H814 394 aaKnown RBP25.31■■□□□ 1.64
COL20A1-208ENST00000496810 ZNF277Q9NRM2 450 aaPredicted RBP25.31■■□□□ 1.64
COL20A1-208ENST00000496810 ATP5J2-PTCD1G3V325 749 aa25.3■■□□□ 1.64
COL20A1-208ENST00000496810 HCLS1P14317 486 aaPredicted RBP25.3■■□□□ 1.64
COL20A1-208ENST00000496810 ALDH1B1P30837 517 aa25.3■■□□□ 1.64
COL20A1-208ENST00000496810 HYPKQ9NX55 129 aa25.3■■□□□ 1.64
COL20A1-208ENST00000496810 HSPA6P17066 643 aa25.29■■□□□ 1.64
COL20A1-208ENST00000496810 FKBP4Q02790 459 aaKnown RBP eCLIP25.29■■□□□ 1.64
COL20A1-208ENST00000496810 ANKRD13DQ6ZTN6 518 aa25.29■■□□□ 1.64
COL20A1-208ENST00000496810 SLC10A5Q5PT55 438 aa25.28■■□□□ 1.64
COL20A1-208ENST00000496810 ISCA1Q9BUE6 129 aa25.28■■□□□ 1.64
COL20A1-208ENST00000496810 TRMT112Q9UI30 125 aaKnown RBP25.28■■□□□ 1.64
COL20A1-208ENST00000496810 SALL2Q9Y467 1007 aaPredicted RBP25.28■■□□□ 1.64
COL20A1-208ENST00000496810 TCERG1O14776 1098 aaKnown RBP25.27■■□□□ 1.64
COL20A1-208ENST00000496810 ABCC4O15439 1325 aa25.27■■□□□ 1.64
COL20A1-208ENST00000496810 RNF123Q5XPI4 1314 aa25.27■■□□□ 1.64
COL20A1-208ENST00000496810 POTECB2RU33 542 aa25.26■■□□□ 1.63
COL20A1-208ENST00000496810 CRAMP1Q96RY5 1269 aa25.26■■□□□ 1.63
COL20A1-208ENST00000496810 SH3TC1Q8TE82 1336 aa25.26■■□□□ 1.63
COL20A1-208ENST00000496810 LRRC37AA6NMS7 1700 aa25.26■■□□□ 1.63
COL20A1-208ENST00000496810 PPEF1O14829 653 aaPredicted RBP25.25■■□□□ 1.63
COL20A1-208ENST00000496810 RBM46Q8TBY0 533 aaKnown RBP25.25■■□□□ 1.63
COL20A1-208ENST00000496810 RBM17Q96I25 401 aaKnown RBP25.25■■□□□ 1.63
COL20A1-208ENST00000496810 NLRP3Q96P20 1036 aa25.25■■□□□ 1.63
COL20A1-208ENST00000496810 ZNF541Q9H0D2 1346 aa25.25■■□□□ 1.63
COL20A1-208ENST00000496810 C16orf71Q8IYS4 520 aaPredicted RBP25.24■■□□□ 1.63
COL20A1-208ENST00000496810 RTKN2Q8IZC4 609 aa25.24■■□□□ 1.63
COL20A1-208ENST00000496810 FANCIQ9NVI1 1328 aa25.23■■□□□ 1.63
COL20A1-208ENST00000496810 DDNO94850 711 aaPredicted RBP25.23■■□□□ 1.63
COL20A1-208ENST00000496810 RTL5Q5HYW3 569 aaPredicted RBP25.23■■□□□ 1.63
COL20A1-208ENST00000496810 FAM9BQ8IZU0 186 aa25.23■■□□□ 1.63
COL20A1-208ENST00000496810 FAM89AQ96GI7 184 aa25.23■■□□□ 1.63
COL20A1-208ENST00000496810 IL16Q14005 1332 aa25.22■■□□□ 1.63
COL20A1-208ENST00000496810 IARSP41252 1262 aaKnown RBP25.22■■□□□ 1.63
COL20A1-208ENST00000496810 GOLGA2Q08379 1002 aa25.22■■□□□ 1.63
COL20A1-208ENST00000496810 DUOX1Q9NRD9 1551 aa25.22■■□□□ 1.63
COL20A1-208ENST00000496810 RIC3Q7Z5B4 369 aa25.21■■□□□ 1.63
COL20A1-208ENST00000496810 SCN4AP35499 1836 aa25.21■■□□□ 1.63
COL20A1-208ENST00000496810 VEGFAP15692 232 aaPredicted RBP25.2■■□□□ 1.62
COL20A1-208ENST00000496810 CCDC30Q5VVM6 783 aa25.2■■□□□ 1.62
COL20A1-208ENST00000496810 PSMD1Q99460 953 aa25.2■■□□□ 1.62
COL20A1-208ENST00000496810 SPINK5Q9NQ38 1064 aaPredicted RBP25.2■■□□□ 1.62
COL20A1-208ENST00000496810 TWISTNBQ3B726 338 aaPredicted RBP25.19■■□□□ 1.62
COL20A1-208ENST00000496810 DPY19L2Q6NUT2 758 aa25.19■■□□□ 1.62
COL20A1-208ENST00000496810 MYD88Q99836 296 aa25.19■■□□□ 1.62
COL20A1-208ENST00000496810 PCNTO95613 3336 aa25.19■■□□□ 1.62
COL20A1-208ENST00000496810 NCBP3Q53F19 620 aaKnown RBP25.18■■□□□ 1.62
COL20A1-208ENST00000496810 G2E3Q7L622 706 aa25.18■■□□□ 1.62
COL20A1-208ENST00000496810 ATP6V0A2Q9Y487 856 aa25.18■■□□□ 1.62
COL20A1-208ENST00000496810 CACNA1FO60840 1977 aa25.18■■□□□ 1.62
COL20A1-208ENST00000496810 LTBP1Q14766 1721 aa25.17■■□□□ 1.62
COL20A1-208ENST00000496810 TRIM28Q13263 835 aaKnown RBP25.17■■□□□ 1.62
COL20A1-208ENST00000496810 CC2D2BQ6DHV5 1058 aa25.17■■□□□ 1.62
COL20A1-208ENST00000496810 POTEIP0CG38 1075 aa25.16■■□□□ 1.62
COL20A1-208ENST00000496810 POTEJP0CG39 1038 aa25.16■■□□□ 1.62
COL20A1-208ENST00000496810 HTRA3P83110 453 aa25.16■■□□□ 1.62
COL20A1-208ENST00000496810 JARID2Q92833 1246 aaPredicted RBP25.16■■□□□ 1.62
COL20A1-208ENST00000496810 MYH3P11055 1940 aa25.16■■□□□ 1.62
COL20A1-208ENST00000496810 FSTL1Q12841 308 aa25.15■■□□□ 1.62
COL20A1-208ENST00000496810 MAP3K2Q9Y2U5 619 aa25.15■■□□□ 1.62
COL20A1-208ENST00000496810 SPEF2Q9C093 1822 aa25.14■■□□□ 1.62
COL20A1-208ENST00000496810 ADAMTSL1Q8N6G6 1762 aa25.14■■□□□ 1.62
COL20A1-208ENST00000496810 FZD9O00144 591 aa25.14■■□□□ 1.62
COL20A1-208ENST00000496810 IRS4O14654 1257 aaPredicted RBP25.14■■□□□ 1.62
COL20A1-208ENST00000496810 GRAPQ13588 217 aa25.14■■□□□ 1.62
COL20A1-208ENST00000496810 DDX46Q7L014 1031 aaKnown RBP25.14■■□□□ 1.62
COL20A1-208ENST00000496810 GRAPLQ8TC17 118 aaPredicted RBP25.14■■□□□ 1.62
COL20A1-208ENST00000496810 METTL22Q9BUU2 404 aaPredicted RBP25.14■■□□□ 1.62
COL20A1-208ENST00000496810 WDR63Q8IWG1 891 aa25.13■■□□□ 1.61
COL20A1-208ENST00000496810 SMC1BQ8NDV3 1235 aa25.13■■□□□ 1.61
COL20A1-208ENST00000496810 CELF1Q92879 486 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms