RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RFX5P48382 616 aaPredicted RBP15.78■□□□□ 0.12
GARNL3-220ENST00000496711 EVA1CP58658 441 aa15.78■□□□□ 0.12
GARNL3-220ENST00000496711 CCDC8Q9H0W5 538 aaPredicted RBP15.78■□□□□ 0.12
GARNL3-220ENST00000496711 TLR7Q9NYK1 1049 aaKnown RBP15.78■□□□□ 0.12
GARNL3-220ENST00000496711 SNX14Q9Y5W7 946 aa15.78■□□□□ 0.12
GARNL3-220ENST00000496711 CASP7P55210 303 aa15.78■□□□□ 0.12
GARNL3-220ENST00000496711 PKP1Q13835 747 aa15.78■□□□□ 0.12
GARNL3-220ENST00000496711 DDX54Q8TDD1 881 aaKnown RBP15.78■□□□□ 0.12
GARNL3-220ENST00000496711 INTS4Q96HW7 963 aaKnown RBP15.78■□□□□ 0.12
GARNL3-220ENST00000496711 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.77■□□□□ 0.12
GARNL3-220ENST00000496711 COL22A1Q8NFW1 1626 aaPredicted RBP15.77■□□□□ 0.12
GARNL3-220ENST00000496711 JARID2Q92833 1246 aaPredicted RBP15.77■□□□□ 0.11
GARNL3-220ENST00000496711 ROBO1Q9Y6N7 1651 aa15.77■□□□□ 0.11
GARNL3-220ENST00000496711 PTPN12Q05209 780 aaKnown RBP15.76■□□□□ 0.11
GARNL3-220ENST00000496711 NOL8Q76FK4 1167 aaKnown RBP15.76■□□□□ 0.11
GARNL3-220ENST00000496711 ISY1Q9ULR0 285 aaKnown RBP15.76■□□□□ 0.11
GARNL3-220ENST00000496711 LRP6O75581 1613 aa15.76■□□□□ 0.11
GARNL3-220ENST00000496711 COL16A1Q07092 1604 aaPredicted RBP15.76■□□□□ 0.11
GARNL3-220ENST00000496711 TTLL7Q6ZT98 887 aa15.75■□□□□ 0.11
GARNL3-220ENST00000496711 CWC25Q9NXE8 425 aaPredicted RBP15.75■□□□□ 0.11
GARNL3-220ENST00000496711 CCDC171Q6TFL3 1326 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 H7C1W4 665 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 A1BGP04217 495 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 TNNI3KQ59H18 835 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 MCTP1Q6DN14 999 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 RASEFQ8IZ41 740 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 TMOD3Q9NYL9 352 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 ZDHHC9Q9Y397 364 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 FPGT-TNNI3KV9GXZ4 949 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 AHDC1Q5TGY3 1603 aaPredicted RBP15.74■□□□□ 0.11
GARNL3-220ENST00000496711 ANKRD36CQ5JPF3 1778 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 KLHL40Q2TBA0 621 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 TTC14Q96N46 770 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 FSD1Q9BTV5 496 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 BOLA2Q9H3K6 86 aa15.74■□□□□ 0.11
GARNL3-220ENST00000496711 PTH1RQ03431 593 aa15.73■□□□□ 0.11
GARNL3-220ENST00000496711 TFCP2Q12800 502 aa15.73■□□□□ 0.11
GARNL3-220ENST00000496711 NMIQ13287 307 aaPredicted RBP15.73■□□□□ 0.11
GARNL3-220ENST00000496711 SNRKQ9NRH2 765 aa15.73■□□□□ 0.11
GARNL3-220ENST00000496711 DISP2A7MBM2 1401 aa15.73■□□□□ 0.11
GARNL3-220ENST00000496711 RFX7Q2KHR2 1363 aa15.73■□□□□ 0.11
GARNL3-220ENST00000496711 FOXO4P98177 505 aa15.72■□□□□ 0.11
GARNL3-220ENST00000496711 LMBR1LQ6UX01 489 aa15.72■□□□□ 0.11
GARNL3-220ENST00000496711 CCDC191Q8NCU4 936 aa15.72■□□□□ 0.11
GARNL3-220ENST00000496711 KCNB2Q92953 911 aa15.72■□□□□ 0.11
GARNL3-220ENST00000496711 ARXQ96QS3 562 aa15.72■□□□□ 0.11
GARNL3-220ENST00000496711 DBNLQ9UJU6 430 aaKnown RBP15.72■□□□□ 0.11
GARNL3-220ENST00000496711 MED23Q9ULK4 1368 aa15.72■□□□□ 0.11
GARNL3-220ENST00000496711 ATP5JP18859 108 aa15.71■□□□□ 0.11
GARNL3-220ENST00000496711 MRE11P49959 708 aa15.71■□□□□ 0.11
GARNL3-220ENST00000496711 FAM227BQ96M60 508 aa15.71■□□□□ 0.11
GARNL3-220ENST00000496711 ZBTB3Q9H5J0 574 aa15.71■□□□□ 0.11
GARNL3-220ENST00000496711 DDX49Q9Y6V7 483 aaKnown RBP15.71■□□□□ 0.11
GARNL3-220ENST00000496711 BRD1O95696 1058 aa15.71■□□□□ 0.11
GARNL3-220ENST00000496711 XRCC6P12956 609 aaKnown RBP eCLIP15.71■□□□□ 0.11
GARNL3-220ENST00000496711 CASTP20810 708 aaKnown RBP15.71■□□□□ 0.11
GARNL3-220ENST00000496711 AK2P54819 239 aa15.71■□□□□ 0.11
GARNL3-220ENST00000496711 PRPF40BQ6NWY9 871 aaKnown RBP15.71■□□□□ 0.11
GARNL3-220ENST00000496711 BTG4Q9NY30 223 aa15.71■□□□□ 0.11
GARNL3-220ENST00000496711 JCADQ9P266 1359 aa15.71■□□□□ 0.1
GARNL3-220ENST00000496711 SPEF2Q9C093 1822 aa15.71■□□□□ 0.1
GARNL3-220ENST00000496711 DOT1LQ8TEK3 1739 aa15.7■□□□□ 0.1
GARNL3-220ENST00000496711 A0A0D9SFI3 127 aa15.7■□□□□ 0.1
GARNL3-220ENST00000496711 NECTIN1Q15223 517 aa15.7■□□□□ 0.1
GARNL3-220ENST00000496711 TM6SF1Q9BZW5 370 aa15.7■□□□□ 0.1
GARNL3-220ENST00000496711 LMBRD1Q9NUN5 540 aa15.7■□□□□ 0.1
GARNL3-220ENST00000496711 CHMP3Q9Y3E7 222 aa15.7■□□□□ 0.1
GARNL3-220ENST00000496711 RBM8AQ9Y5S9 174 aaKnown RBP15.7■□□□□ 0.1
GARNL3-220ENST00000496711 MYH3P11055 1940 aa15.7■□□□□ 0.1
GARNL3-220ENST00000496711 VSIG10Q8N0Z9 540 aa15.69■□□□□ 0.1
GARNL3-220ENST00000496711 ZKSCAN1P17029 563 aaPredicted RBP15.69■□□□□ 0.1
GARNL3-220ENST00000496711 MAP4K1Q92918 833 aa15.69■□□□□ 0.1
GARNL3-220ENST00000496711 JAKMIP1Q96N16 626 aaKnown RBP15.69■□□□□ 0.1
GARNL3-220ENST00000496711 TEX13AQ9BXU3 409 aaPredicted RBP15.69■□□□□ 0.1
GARNL3-220ENST00000496711 GRPEL1Q9HAV7 217 aa15.69■□□□□ 0.1
GARNL3-220ENST00000496711 LIMCH1Q9UPQ0 1083 aa15.69■□□□□ 0.1
GARNL3-220ENST00000496711 RPAP1Q9BWH6 1393 aaPredicted RBP15.68■□□□□ 0.1
GARNL3-220ENST00000496711 KCNJ4P48050 445 aa15.68■□□□□ 0.1
GARNL3-220ENST00000496711 VPS53Q5VIR6 699 aa15.68■□□□□ 0.1
GARNL3-220ENST00000496711 RUFY3Q7L099 469 aa15.68■□□□□ 0.1
GARNL3-220ENST00000496711 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
GARNL3-220ENST00000496711 ZNF609O15014 1411 aa15.68■□□□□ 0.1
GARNL3-220ENST00000496711 CREB3L3Q68CJ9 461 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 PIGBQ92521 554 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 ISCA1Q9BUE6 129 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 ZSWIM6Q9HCJ5 1215 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 CYP46A1Q9Y6A2 500 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 NRAPQ86VF7 1730 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 ADCK5Q3MIX3 580 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 ATG9AQ7Z3C6 839 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 GPR108Q9NPR9 543 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 PDRG1Q9NUG6 133 aa15.67■□□□□ 0.1
GARNL3-220ENST00000496711 WDR33Q9C0J8 1336 aaKnown RBP15.66■□□□□ 0.1
GARNL3-220ENST00000496711 TCHHQ07283 1943 aa15.66■□□□□ 0.1
GARNL3-220ENST00000496711 KAT6BQ8WYB5 2073 aa15.66■□□□□ 0.1
GARNL3-220ENST00000496711 NUP98P52948 1817 aa15.66■□□□□ 0.1
GARNL3-220ENST00000496711 BCL9O00512 1426 aa15.66■□□□□ 0.1
GARNL3-220ENST00000496711 IL15P40933 162 aaPredicted RBP15.66■□□□□ 0.1
GARNL3-220ENST00000496711 RNF20Q5VTR2 975 aa15.66■□□□□ 0.1
GARNL3-220ENST00000496711 FOXD4L5Q5VV16 416 aaPredicted RBP15.66■□□□□ 0.1
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