RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 CST9Q5W186 159 aa13□□□□□ -0.33
SH3D21-204ENST00000496636 SAPCD2Q86UD0 394 aa13□□□□□ -0.33
SH3D21-204ENST00000496636 ADARB2Q9NS39 739 aaKnown RBP13□□□□□ -0.33
SH3D21-204ENST00000496636 TSKSQ9UJT2 592 aa13□□□□□ -0.33
SH3D21-204ENST00000496636 COL3A1P02461 1466 aaPredicted RBP12.99□□□□□ -0.33
SH3D21-204ENST00000496636 CDHR2Q9BYE9 1310 aa12.99□□□□□ -0.33
SH3D21-204ENST00000496636 TRAF5O00463 557 aa12.99□□□□□ -0.33
SH3D21-204ENST00000496636 AOC2O75106 756 aa12.99□□□□□ -0.33
SH3D21-204ENST00000496636 EPS15P42566 896 aa12.99□□□□□ -0.33
SH3D21-204ENST00000496636 NIM1KQ8IY84 436 aa12.99□□□□□ -0.33
SH3D21-204ENST00000496636 COL4A5P29400 1685 aa12.99□□□□□ -0.33
SH3D21-204ENST00000496636 ABCC12Q96J65 1359 aa12.98□□□□□ -0.33
SH3D21-204ENST00000496636 TNRC18O15417 2968 aaPredicted RBP12.98□□□□□ -0.33
SH3D21-204ENST00000496636 KIF7Q2M1P5 1343 aa12.98□□□□□ -0.33
SH3D21-204ENST00000496636 CELF2O95319 508 aaKnown RBP12.98□□□□□ -0.33
SH3D21-204ENST00000496636 HOXA10P31260 410 aaPredicted RBP12.98□□□□□ -0.33
SH3D21-204ENST00000496636 PIP4K2AP48426 406 aaPredicted RBP12.98□□□□□ -0.33
SH3D21-204ENST00000496636 NOGQ13253 232 aa12.98□□□□□ -0.33
SH3D21-204ENST00000496636 DGKZQ13574 1117 aa12.98□□□□□ -0.33
SH3D21-204ENST00000496636 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
SH3D21-204ENST00000496636 USP16Q9Y5T5 823 aa12.98□□□□□ -0.33
SH3D21-204ENST00000496636 TRPM7Q96QT4 1865 aa12.97□□□□□ -0.33
SH3D21-204ENST00000496636 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
SH3D21-204ENST00000496636 U2SURPO15042 1029 aaKnown RBP12.97□□□□□ -0.33
SH3D21-204ENST00000496636 FMR1Q06787 632 aaKnown RBP eCLIP12.97□□□□□ -0.33
SH3D21-204ENST00000496636 TMX4Q9H1E5 349 aaPredicted RBP12.97□□□□□ -0.33
SH3D21-204ENST00000496636 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
SH3D21-204ENST00000496636 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
SH3D21-204ENST00000496636 KCNQ3O43525 872 aa12.96□□□□□ -0.33
SH3D21-204ENST00000496636 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.33
SH3D21-204ENST00000496636 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
SH3D21-204ENST00000496636 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
SH3D21-204ENST00000496636 PPIP5K2O43314 1243 aa12.95□□□□□ -0.34
SH3D21-204ENST00000496636 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
SH3D21-204ENST00000496636 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
SH3D21-204ENST00000496636 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
SH3D21-204ENST00000496636 CRAMP1Q96RY5 1269 aa12.95□□□□□ -0.34
SH3D21-204ENST00000496636 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
SH3D21-204ENST00000496636 ERVV-1B6SEH8 477 aa12.94□□□□□ -0.34
SH3D21-204ENST00000496636 PRPF38BQ5VTL8 546 aaKnown RBP12.94□□□□□ -0.34
SH3D21-204ENST00000496636 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
SH3D21-204ENST00000496636 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
SH3D21-204ENST00000496636 RBM17Q96I25 401 aaKnown RBP12.94□□□□□ -0.34
SH3D21-204ENST00000496636 SAGE1Q9NXZ1 904 aa12.94□□□□□ -0.34
SH3D21-204ENST00000496636 PGAP2Q9UHJ9 254 aa12.94□□□□□ -0.34
SH3D21-204ENST00000496636 PRAMEF22A3QJZ6 481 aa12.93□□□□□ -0.34
SH3D21-204ENST00000496636 HLFQ16534 295 aa12.93□□□□□ -0.34
SH3D21-204ENST00000496636 CDC37L1Q7L3B6 337 aa12.93□□□□□ -0.34
SH3D21-204ENST00000496636 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
SH3D21-204ENST00000496636 GLIS2Q9BZE0 524 aaPredicted RBP12.93□□□□□ -0.34
SH3D21-204ENST00000496636 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
SH3D21-204ENST00000496636 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
SH3D21-204ENST00000496636 GMPSP49915 693 aaPredicted RBP12.92□□□□□ -0.34
SH3D21-204ENST00000496636 KIF6Q6ZMV9 814 aa12.92□□□□□ -0.34
SH3D21-204ENST00000496636 ZNF408Q9H9D4 720 aa12.92□□□□□ -0.34
SH3D21-204ENST00000496636 MAP3K15Q6ZN16 1313 aa12.91□□□□□ -0.34
SH3D21-204ENST00000496636 HUNKP57058 714 aa12.91□□□□□ -0.34
SH3D21-204ENST00000496636 CXCL9Q07325 125 aa12.91□□□□□ -0.34
SH3D21-204ENST00000496636 AOC3Q16853 763 aa12.91□□□□□ -0.34
SH3D21-204ENST00000496636 CC2D1BQ5T0F9 858 aaKnown RBP12.91□□□□□ -0.34
SH3D21-204ENST00000496636 ATP6V0A2Q9Y487 856 aa12.91□□□□□ -0.34
SH3D21-204ENST00000496636 LAMB4A4D0S4 1761 aa12.9□□□□□ -0.34
SH3D21-204ENST00000496636 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
SH3D21-204ENST00000496636 TNIP1Q15025 636 aa12.9□□□□□ -0.34
SH3D21-204ENST00000496636 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
SH3D21-204ENST00000496636 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
SH3D21-204ENST00000496636 RTFDC1Q9BY42 306 aaPredicted RBP12.9□□□□□ -0.34
SH3D21-204ENST00000496636 RSPH6AQ9H0K4 717 aa12.9□□□□□ -0.34
SH3D21-204ENST00000496636 CASP8AP2Q9UKL3 1982 aa12.9□□□□□ -0.34
SH3D21-204ENST00000496636 PER1O15534 1290 aaPredicted RBP12.89□□□□□ -0.35
SH3D21-204ENST00000496636 SOX10P56693 466 aa12.89□□□□□ -0.35
SH3D21-204ENST00000496636 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
SH3D21-204ENST00000496636 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
SH3D21-204ENST00000496636 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
SH3D21-204ENST00000496636 NTSR2O95665 410 aa12.88□□□□□ -0.35
SH3D21-204ENST00000496636 KIAA2012Q0VF49 1180 aa12.88□□□□□ -0.35
SH3D21-204ENST00000496636 PARP10Q53GL7 1025 aa12.88□□□□□ -0.35
SH3D21-204ENST00000496636 DPP8Q6V1X1 898 aaPredicted RBP12.88□□□□□ -0.35
SH3D21-204ENST00000496636 NLRP3Q96P20 1036 aa12.88□□□□□ -0.35
SH3D21-204ENST00000496636 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
SH3D21-204ENST00000496636 H7C1D1 291 aa12.87□□□□□ -0.35
SH3D21-204ENST00000496636 TCERG1O14776 1098 aaKnown RBP12.87□□□□□ -0.35
SH3D21-204ENST00000496636 GPTP24298 496 aa12.87□□□□□ -0.35
SH3D21-204ENST00000496636 RGMBQ6NW40 437 aa12.87□□□□□ -0.35
SH3D21-204ENST00000496636 MCM10Q7L590 875 aa12.87□□□□□ -0.35
SH3D21-204ENST00000496636 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
SH3D21-204ENST00000496636 CTU1Q7Z7A3 348 aaKnown RBP12.87□□□□□ -0.35
SH3D21-204ENST00000496636 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
SH3D21-204ENST00000496636 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
SH3D21-204ENST00000496636 BBOX1O75936 387 aa12.86□□□□□ -0.35
SH3D21-204ENST00000496636 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
SH3D21-204ENST00000496636 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
SH3D21-204ENST00000496636 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
SH3D21-204ENST00000496636 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
SH3D21-204ENST00000496636 ZNF34Q8IZ26 560 aa12.86□□□□□ -0.35
SH3D21-204ENST00000496636 C2orf69Q8N8R5 385 aa12.86□□□□□ -0.35
SH3D21-204ENST00000496636 GBA2Q9HCG7 927 aaPredicted RBP12.86□□□□□ -0.35
SH3D21-204ENST00000496636 ABCC4O15439 1325 aa12.86□□□□□ -0.35
SH3D21-204ENST00000496636 ERBB4Q15303 1308 aa12.86□□□□□ -0.35
SH3D21-204ENST00000496636 FAM155AB1AL88 458 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms