RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 TMC4Q7Z404 712 aa9.73□□□□□ -0.85
CDHR3-214ENST00000496633 C8orf58Q8NAV2 365 aa9.73□□□□□ -0.85
CDHR3-214ENST00000496633 NECTIN2Q92692 538 aa9.73□□□□□ -0.85
CDHR3-214ENST00000496633 RPGRQ92834 1020 aaKnown RBP9.73□□□□□ -0.85
CDHR3-214ENST00000496633 RBM17Q96I25 401 aaKnown RBP9.73□□□□□ -0.85
CDHR3-214ENST00000496633 SH3TC1Q8TE82 1336 aa9.73□□□□□ -0.85
CDHR3-214ENST00000496633 FANCIQ9NVI1 1328 aa9.73□□□□□ -0.85
CDHR3-214ENST00000496633 ANKRD36CQ5JPF3 1778 aa9.73□□□□□ -0.85
CDHR3-214ENST00000496633 ELL2O00472 640 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-214ENST00000496633 GPTP24298 496 aa9.72□□□□□ -0.85
CDHR3-214ENST00000496633 KRT24Q2M2I5 525 aa9.72□□□□□ -0.85
CDHR3-214ENST00000496633 PROSER3Q2NL68 480 aa9.72□□□□□ -0.85
CDHR3-214ENST00000496633 CRY2Q49AN0 593 aa9.72□□□□□ -0.85
CDHR3-214ENST00000496633 SUSD4Q5VX71 490 aa9.72□□□□□ -0.85
CDHR3-214ENST00000496633 NLRP10Q86W26 655 aa9.72□□□□□ -0.85
CDHR3-214ENST00000496633 RTKN2Q8IZC4 609 aa9.72□□□□□ -0.85
CDHR3-214ENST00000496633 CCDC191Q8NCU4 936 aa9.72□□□□□ -0.85
CDHR3-214ENST00000496633 TRMT112Q9UI30 125 aaKnown RBP9.72□□□□□ -0.85
CDHR3-214ENST00000496633 NTSR2O95665 410 aa9.71□□□□□ -0.86
CDHR3-214ENST00000496633 MYCNP04198 464 aaPredicted RBP9.71□□□□□ -0.86
CDHR3-214ENST00000496633 SLC4A2P04920 1241 aa9.71□□□□□ -0.86
CDHR3-214ENST00000496633 LMNB1P20700 586 aa9.71□□□□□ -0.86
CDHR3-214ENST00000496633 HOXA10P31260 410 aaPredicted RBP9.71□□□□□ -0.86
CDHR3-214ENST00000496633 CCDC93Q567U6 631 aa9.71□□□□□ -0.86
CDHR3-214ENST00000496633 KSR2Q6VAB6 950 aa9.71□□□□□ -0.86
CDHR3-214ENST00000496633 TSR2Q969E8 191 aaKnown RBP9.71□□□□□ -0.86
CDHR3-214ENST00000496633 CRAMP1Q96RY5 1269 aa9.71□□□□□ -0.86
CDHR3-214ENST00000496633 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
CDHR3-214ENST00000496633 KDM2BQ8NHM5 1336 aa9.71□□□□□ -0.86
CDHR3-214ENST00000496633 LTBP3Q9NS15 1303 aa9.71□□□□□ -0.86
CDHR3-214ENST00000496633 ARFGEF2Q9Y6D5 1785 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 ANKRD31Q8N7Z5 1873 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 FAM177BA6PVY3 158 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 BBOX1O75936 387 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 ANXA1P04083 346 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 ERFEQ4G0M1 354 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 PRPF40BQ6NWY9 871 aaKnown RBP9.7□□□□□ -0.86
CDHR3-214ENST00000496633 DDX46Q7L014 1031 aaKnown RBP9.7□□□□□ -0.86
CDHR3-214ENST00000496633 ZBTB38Q8NAP3 1195 aaPredicted RBP9.7□□□□□ -0.86
CDHR3-214ENST00000496633 ZNF784Q8NCA9 323 aaPredicted RBP9.7□□□□□ -0.86
CDHR3-214ENST00000496633 ISCA1Q9BUE6 129 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 METTL22Q9BUU2 404 aaPredicted RBP9.7□□□□□ -0.86
CDHR3-214ENST00000496633 VPS33BQ9H267 617 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 GPBP1L1Q9HC44 474 aaPredicted RBP9.7□□□□□ -0.86
CDHR3-214ENST00000496633 UBN2Q6ZU65 1347 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 ZNF521Q96K83 1311 aa9.7□□□□□ -0.86
CDHR3-214ENST00000496633 VAMP4O75379 141 aa9.69□□□□□ -0.86
CDHR3-214ENST00000496633 EXOSC9Q06265 439 aaKnown RBP9.69□□□□□ -0.86
CDHR3-214ENST00000496633 DPY19L2Q6NUT2 758 aa9.69□□□□□ -0.86
CDHR3-214ENST00000496633 TSPYL6Q8N831 410 aa9.69□□□□□ -0.86
CDHR3-214ENST00000496633 TAOK3Q9H2K8 898 aa9.69□□□□□ -0.86
CDHR3-214ENST00000496633 CWC25Q9NXE8 425 aaPredicted RBP9.69□□□□□ -0.86
CDHR3-214ENST00000496633 ADCY9O60503 1353 aa9.68□□□□□ -0.86
CDHR3-214ENST00000496633 C21orf2O43822 256 aa9.68□□□□□ -0.86
CDHR3-214ENST00000496633 FLIIQ13045 1269 aa9.68□□□□□ -0.86
CDHR3-214ENST00000496633 FKBP5Q13451 457 aaPredicted RBP9.68□□□□□ -0.86
CDHR3-214ENST00000496633 NUTM1Q86Y26 1132 aa9.68□□□□□ -0.86
CDHR3-214ENST00000496633 SUPT20HQ8NEM7 779 aa9.68□□□□□ -0.86
CDHR3-214ENST00000496633 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
CDHR3-214ENST00000496633 RNF181Q9P0P0 153 aa9.68□□□□□ -0.86
CDHR3-214ENST00000496633 WWC3Q9ULE0 1092 aa9.68□□□□□ -0.86
CDHR3-214ENST00000496633 PI4KAP2A4QPH2 592 aa9.67□□□□□ -0.86
CDHR3-214ENST00000496633 PCCAP05165 728 aaPredicted RBP9.67□□□□□ -0.86
CDHR3-214ENST00000496633 FKBP4Q02790 459 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDHR3-214ENST00000496633 SF3B3Q15393 1217 aaKnown RBP9.67□□□□□ -0.86
CDHR3-214ENST00000496633 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
CDHR3-214ENST00000496633 C9orf131Q5VYM1 1079 aa9.67□□□□□ -0.86
CDHR3-214ENST00000496633 PI4KAP1Q8N8J0 262 aa9.67□□□□□ -0.86
CDHR3-214ENST00000496633 PSMD1Q99460 953 aa9.67□□□□□ -0.86
CDHR3-214ENST00000496633 MAP3K2Q9Y2U5 619 aa9.67□□□□□ -0.86
CDHR3-214ENST00000496633 COL11A2P13942 1736 aaPredicted RBP9.67□□□□□ -0.86
CDHR3-214ENST00000496633 ABCC12Q96J65 1359 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 PTPRCP08575 1304 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 CDHR2Q9BYE9 1310 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 IRS4O14654 1257 aaPredicted RBP9.66□□□□□ -0.86
CDHR3-214ENST00000496633 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
CDHR3-214ENST00000496633 PDE8AO60658 829 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 SLFN5Q08AF3 891 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 CCDC152Q4G0S7 254 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 CCDC24Q8N4L8 307 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 LINS1Q8NG48 757 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 DNAAF4Q8WXU2 420 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 JDP2Q8WYK2 163 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 MYD88Q99836 296 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 DAXXQ9UER7 740 aaPredicted RBP9.66□□□□□ -0.86
CDHR3-214ENST00000496633 HDAC5Q9UQL6 1122 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 FER1L6Q2WGJ9 1857 aa9.66□□□□□ -0.86
CDHR3-214ENST00000496633 GRAPQ13588 217 aa9.65□□□□□ -0.86
CDHR3-214ENST00000496633 SP8Q8IXZ3 490 aa9.65□□□□□ -0.86
CDHR3-214ENST00000496633 C16orf71Q8IYS4 520 aaPredicted RBP9.65□□□□□ -0.86
CDHR3-214ENST00000496633 GRAPLQ8TC17 118 aaPredicted RBP9.65□□□□□ -0.86
CDHR3-214ENST00000496633 C7orf43Q8WVR3 580 aa9.65□□□□□ -0.86
CDHR3-214ENST00000496633 ATP6V0A2Q9Y487 856 aa9.65□□□□□ -0.86
CDHR3-214ENST00000496633 SLX4Q8IY92 1834 aa9.64□□□□□ -0.87
CDHR3-214ENST00000496633 NFKBIEO00221 500 aa9.64□□□□□ -0.87
CDHR3-214ENST00000496633 FAM89AQ96GI7 184 aa9.64□□□□□ -0.87
CDHR3-214ENST00000496633 CDC5LQ99459 802 aaKnown RBP9.64□□□□□ -0.87
CDHR3-214ENST00000496633 SBF1O95248 1867 aa9.64□□□□□ -0.87
CDHR3-214ENST00000496633 LAMB2P55268 1798 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms