RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 ZSWIM6Q9HCJ5 1215 aa17.66■□□□□ 0.42
GCOM1-212ENST00000496627 RBM8AQ9Y5S9 174 aaKnown RBP17.66■□□□□ 0.42
GCOM1-212ENST00000496627 NPHP3Q7Z494 1330 aa17.66■□□□□ 0.42
GCOM1-212ENST00000496627 KDM6AO15550 1401 aaPredicted RBP17.65■□□□□ 0.42
GCOM1-212ENST00000496627 AFDNP55196 1824 aaKnown RBP17.65■□□□□ 0.42
GCOM1-212ENST00000496627 GJB2P29033 226 aa17.65■□□□□ 0.42
GCOM1-212ENST00000496627 NECTIN1Q15223 517 aa17.65■□□□□ 0.42
GCOM1-212ENST00000496627 XAGE3Q8WTP9 111 aa17.65■□□□□ 0.42
GCOM1-212ENST00000496627 FAM227BQ96M60 508 aa17.65■□□□□ 0.42
GCOM1-212ENST00000496627 FSD1Q9BTV5 496 aa17.65■□□□□ 0.42
GCOM1-212ENST00000496627 NEURL1BA8MQ27 555 aa17.64■□□□□ 0.41
GCOM1-212ENST00000496627 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
GCOM1-212ENST00000496627 MYD88Q99836 296 aa17.64■□□□□ 0.41
GCOM1-212ENST00000496627 NOL7Q9UMY1 257 aaKnown RBP17.64■□□□□ 0.41
GCOM1-212ENST00000496627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.64■□□□□ 0.41
GCOM1-212ENST00000496627 BOLA2Q9H3K6 86 aa17.64■□□□□ 0.41
GCOM1-212ENST00000496627 TLR7Q9NYK1 1049 aaKnown RBP17.64■□□□□ 0.41
GCOM1-212ENST00000496627 CCDC183Q5T5S1 534 aa17.63■□□□□ 0.41
GCOM1-212ENST00000496627 MST1RQ04912 1400 aa17.63■□□□□ 0.41
GCOM1-212ENST00000496627 PHKG2P15735 406 aa17.63■□□□□ 0.41
GCOM1-212ENST00000496627 GCKRQ14397 625 aa17.63■□□□□ 0.41
GCOM1-212ENST00000496627 COPS6Q7L5N1 327 aa17.63■□□□□ 0.41
GCOM1-212ENST00000496627 NFATC2IPQ8NCF5 419 aa17.63■□□□□ 0.41
GCOM1-212ENST00000496627 METTL22Q9BUU2 404 aaPredicted RBP17.63■□□□□ 0.41
GCOM1-212ENST00000496627 CCDC39Q9UFE4 941 aa17.63■□□□□ 0.41
GCOM1-212ENST00000496627 FIBPO43427 364 aa17.62■□□□□ 0.41
GCOM1-212ENST00000496627 UBE2HP62256 183 aa17.62■□□□□ 0.41
GCOM1-212ENST00000496627 TPRNQ4KMQ1 711 aa17.62■□□□□ 0.41
GCOM1-212ENST00000496627 KLHDC4Q8TBB5 520 aa17.62■□□□□ 0.41
GCOM1-212ENST00000496627 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
GCOM1-212ENST00000496627 MAP4K1Q92918 833 aa17.62■□□□□ 0.41
GCOM1-212ENST00000496627 PSMA5P28066 241 aa17.62■□□□□ 0.41
GCOM1-212ENST00000496627 CSPP1Q1MSJ5 1256 aa17.62■□□□□ 0.41
GCOM1-212ENST00000496627 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.62■□□□□ 0.41
GCOM1-212ENST00000496627 MRC1P22897 1456 aa17.62■□□□□ 0.41
GCOM1-212ENST00000496627 MEGF6O75095 1541 aa17.61■□□□□ 0.41
GCOM1-212ENST00000496627 A0A0D9SFI3 127 aa17.61■□□□□ 0.41
GCOM1-212ENST00000496627 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
GCOM1-212ENST00000496627 SLC27A2O14975 620 aa17.61■□□□□ 0.41
GCOM1-212ENST00000496627 CSB-PGBD3P0DP91 1061 aa17.61■□□□□ 0.41
GCOM1-212ENST00000496627 RNF20Q5VTR2 975 aa17.61■□□□□ 0.41
GCOM1-212ENST00000496627 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
GCOM1-212ENST00000496627 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
GCOM1-212ENST00000496627 C19orf44Q9H6X5 657 aa17.61■□□□□ 0.41
GCOM1-212ENST00000496627 OFD1O75665 1012 aa17.6■□□□□ 0.41
GCOM1-212ENST00000496627 LETM1O95202 739 aaPredicted RBP17.6■□□□□ 0.41
GCOM1-212ENST00000496627 SNRKQ9NRH2 765 aa17.6■□□□□ 0.41
GCOM1-212ENST00000496627 MTMR6Q9Y217 621 aa17.6■□□□□ 0.41
GCOM1-212ENST00000496627 ZKSCAN5Q9Y2L8 839 aa17.6■□□□□ 0.41
GCOM1-212ENST00000496627 VPS37CA5D8V6 355 aaPredicted RBP17.6■□□□□ 0.41
GCOM1-212ENST00000496627 ME3Q16798 604 aa17.6■□□□□ 0.41
GCOM1-212ENST00000496627 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
GCOM1-212ENST00000496627 FAM184AQ8NB25 1140 aa17.6■□□□□ 0.41
GCOM1-212ENST00000496627 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
GCOM1-212ENST00000496627 NECAB1Q8N987 351 aa17.59■□□□□ 0.41
GCOM1-212ENST00000496627 ARFGEF2Q9Y6D5 1785 aa17.59■□□□□ 0.41
GCOM1-212ENST00000496627 MED23Q9ULK4 1368 aa17.59■□□□□ 0.41
GCOM1-212ENST00000496627 ZNF500O60304 480 aaPredicted RBP17.59■□□□□ 0.41
GCOM1-212ENST00000496627 PTMAP06454 111 aaKnown RBP17.59■□□□□ 0.41
GCOM1-212ENST00000496627 SNRPA1P09661 255 aaKnown RBP17.59■□□□□ 0.41
GCOM1-212ENST00000496627 BLOC1S2Q6QNY1 142 aa17.59■□□□□ 0.41
GCOM1-212ENST00000496627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.41
GCOM1-212ENST00000496627 COL18A1P39060 1754 aa17.58■□□□□ 0.41
GCOM1-212ENST00000496627 ABCC6O95255 1503 aa17.58■□□□□ 0.41
GCOM1-212ENST00000496627 TPM2P07951 284 aa17.58■□□□□ 0.41
GCOM1-212ENST00000496627 MCM5P33992 734 aa17.58■□□□□ 0.41
GCOM1-212ENST00000496627 ST3GAL1Q11201 340 aa17.58■□□□□ 0.41
GCOM1-212ENST00000496627 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.58■□□□□ 0.41
GCOM1-212ENST00000496627 DTNBO60941 627 aa17.58■□□□□ 0.4
GCOM1-212ENST00000496627 TPCN1Q9ULQ1 816 aa17.58■□□□□ 0.4
GCOM1-212ENST00000496627 DNM1Q05193 864 aaKnown RBP17.57■□□□□ 0.4
GCOM1-212ENST00000496627 ANKRD1Q15327 319 aa17.57■□□□□ 0.4
GCOM1-212ENST00000496627 COPRSQ9NQ92 184 aa17.57■□□□□ 0.4
GCOM1-212ENST00000496627 ATF3P18847 181 aa17.57■□□□□ 0.4
GCOM1-212ENST00000496627 PIP4K2AP48426 406 aaPredicted RBP17.57■□□□□ 0.4
GCOM1-212ENST00000496627 UVSSAQ2YD98 709 aa17.57■□□□□ 0.4
GCOM1-212ENST00000496627 JARID2Q92833 1246 aaPredicted RBP17.57■□□□□ 0.4
GCOM1-212ENST00000496627 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
GCOM1-212ENST00000496627 FMNL2Q96PY5 1086 aa17.57■□□□□ 0.4
GCOM1-212ENST00000496627 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
GCOM1-212ENST00000496627 HMG20BQ9P0W2 317 aa17.56■□□□□ 0.4
GCOM1-212ENST00000496627 UBE3BQ7Z3V4 1068 aa17.56■□□□□ 0.4
GCOM1-212ENST00000496627 ZNF589Q86UQ0 364 aaPredicted RBP17.56■□□□□ 0.4
GCOM1-212ENST00000496627 PKD1L3Q7Z443 1732 aa17.56■□□□□ 0.4
GCOM1-212ENST00000496627 LAMB4A4D0S4 1761 aa17.56■□□□□ 0.4
GCOM1-212ENST00000496627 RPS6KB1P23443 525 aa17.55■□□□□ 0.4
GCOM1-212ENST00000496627 TNNI3KQ59H18 835 aa17.55■□□□□ 0.4
GCOM1-212ENST00000496627 LARP1BQ659C4 914 aaKnown RBP17.55■□□□□ 0.4
GCOM1-212ENST00000496627 FPGT-TNNI3KV9GXZ4 949 aa17.55■□□□□ 0.4
GCOM1-212ENST00000496627 JCADQ9P266 1359 aa17.55■□□□□ 0.4
GCOM1-212ENST00000496627 PDIA4P13667 645 aaKnown RBP17.55■□□□□ 0.4
GCOM1-212ENST00000496627 ATP5JP18859 108 aa17.55■□□□□ 0.4
GCOM1-212ENST00000496627 TFCP2Q12800 502 aa17.55■□□□□ 0.4
GCOM1-212ENST00000496627 LRP10Q7Z4F1 713 aa17.55■□□□□ 0.4
GCOM1-212ENST00000496627 DDX17Q92841 729 aaKnown RBP17.55■□□□□ 0.4
GCOM1-212ENST00000496627 EDC3Q96F86 508 aaKnown RBP17.55■□□□□ 0.4
GCOM1-212ENST00000496627 DBNLQ9UJU6 430 aaKnown RBP17.55■□□□□ 0.4
GCOM1-212ENST00000496627 PDCP20941 246 aa17.54■□□□□ 0.4
GCOM1-212ENST00000496627 RFX5P48382 616 aaPredicted RBP17.54■□□□□ 0.4
GCOM1-212ENST00000496627 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms