RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 KRT27Q7Z3Y8 459 aa17.79■□□□□ 0.44
MACF1-223ENST00000496360 ARHGEF25Q86VW2 580 aa17.79■□□□□ 0.44
MACF1-223ENST00000496360 ERO1AQ96HE7 468 aa17.79■□□□□ 0.44
MACF1-223ENST00000496360 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
MACF1-223ENST00000496360 TUBGCP6Q96RT7 1819 aa17.79■□□□□ 0.44
MACF1-223ENST00000496360 PTGS1P23219 599 aa17.78■□□□□ 0.44
MACF1-223ENST00000496360 LARP1Q6PKG0 1096 aaKnown RBP17.78■□□□□ 0.44
MACF1-223ENST00000496360 NFAT5O94916 1531 aa17.78■□□□□ 0.44
MACF1-223ENST00000496360 SPC24Q8NBT2 197 aa17.78■□□□□ 0.44
MACF1-223ENST00000496360 COL18A1P39060 1754 aa17.77■□□□□ 0.44
MACF1-223ENST00000496360 SALL3Q9BXA9 1300 aa17.77■□□□□ 0.44
MACF1-223ENST00000496360 THSD7AQ9UPZ6 1657 aa17.77■□□□□ 0.44
MACF1-223ENST00000496360 KIF20BQ96Q89 1820 aa17.77■□□□□ 0.44
MACF1-223ENST00000496360 CHMLP26374 656 aa17.77■□□□□ 0.44
MACF1-223ENST00000496360 GIMAP6Q6P9H5 292 aa17.77■□□□□ 0.44
MACF1-223ENST00000496360 HSPA4P34932 840 aa17.76■□□□□ 0.43
MACF1-223ENST00000496360 MAP3K11Q16584 847 aa17.76■□□□□ 0.43
MACF1-223ENST00000496360 CEP135Q66GS9 1140 aa17.76■□□□□ 0.43
MACF1-223ENST00000496360 ZSCAN25Q6NSZ9 544 aa17.76■□□□□ 0.43
MACF1-223ENST00000496360 PLA2G4DQ86XP0 818 aa17.76■□□□□ 0.43
MACF1-223ENST00000496360 ANO2Q9NQ90 1003 aa17.76■□□□□ 0.43
MACF1-223ENST00000496360 KCND1Q9NSA2 647 aa17.76■□□□□ 0.43
MACF1-223ENST00000496360 PALD1Q9ULE6 856 aa17.76■□□□□ 0.43
MACF1-223ENST00000496360 BMS1Q14692 1282 aaKnown RBP17.75■□□□□ 0.43
MACF1-223ENST00000496360 BARGINQ6ZT62 677 aa17.75■□□□□ 0.43
MACF1-223ENST00000496360 CCDC186Q7Z3E2 898 aa17.75■□□□□ 0.43
MACF1-223ENST00000496360 CCDC125Q86Z20 511 aa17.75■□□□□ 0.43
MACF1-223ENST00000496360 KIF1BPQ96EK5 621 aa17.75■□□□□ 0.43
MACF1-223ENST00000496360 C16orf45Q96MC5 204 aaPredicted RBP17.75■□□□□ 0.43
MACF1-223ENST00000496360 STAP2Q9UGK3 403 aa17.75■□□□□ 0.43
MACF1-223ENST00000496360 ELP1O95163 1332 aa17.75■□□□□ 0.43
MACF1-223ENST00000496360 OVOS2A0A0J9YW53 1432 aa17.75■□□□□ 0.43
MACF1-223ENST00000496360 OVOS2Q6IE36 1432 aa17.75■□□□□ 0.43
MACF1-223ENST00000496360 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
MACF1-223ENST00000496360 TPD52L1Q16890 204 aaPredicted RBP17.75■□□□□ 0.43
MACF1-223ENST00000496360 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
MACF1-223ENST00000496360 TDRD7Q8NHU6 1098 aaKnown RBP17.75■□□□□ 0.43
MACF1-223ENST00000496360 EP400Q96L91 3159 aa17.74■□□□□ 0.43
MACF1-223ENST00000496360 SYT1P21579 422 aa17.74■□□□□ 0.43
MACF1-223ENST00000496360 ZNF75DP51815 510 aa17.74■□□□□ 0.43
MACF1-223ENST00000496360 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
MACF1-223ENST00000496360 SMC3Q9UQE7 1217 aa17.74■□□□□ 0.43
MACF1-223ENST00000496360 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
MACF1-223ENST00000496360 CRB1P82279 1406 aa17.74■□□□□ 0.43
MACF1-223ENST00000496360 CYP2C19P33261 490 aa17.73■□□□□ 0.43
MACF1-223ENST00000496360 THRAP3Q9Y2W1 955 aaKnown RBP17.73■□□□□ 0.43
MACF1-223ENST00000496360 TUBB4AP04350 444 aa17.73■□□□□ 0.43
MACF1-223ENST00000496360 KMT5BQ4FZB7 885 aa17.73■□□□□ 0.43
MACF1-223ENST00000496360 NUP62CLQ9H1M0 184 aa17.73■□□□□ 0.43
MACF1-223ENST00000496360 TCHHQ07283 1943 aa17.72■□□□□ 0.43
MACF1-223ENST00000496360 ABCC6O95255 1503 aa17.72■□□□□ 0.43
MACF1-223ENST00000496360 FIBPO43427 364 aa17.72■□□□□ 0.43
MACF1-223ENST00000496360 TYRO3Q06418 890 aa17.72■□□□□ 0.43
MACF1-223ENST00000496360 DRC7Q8IY82 874 aa17.72■□□□□ 0.43
MACF1-223ENST00000496360 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
MACF1-223ENST00000496360 ZSCAN31Q96LW9 406 aaPredicted RBP17.72■□□□□ 0.43
MACF1-223ENST00000496360 TTC14Q96N46 770 aa17.71■□□□□ 0.43
MACF1-223ENST00000496360 DDX19AQ9NUU7 478 aaKnown RBP17.71■□□□□ 0.43
MACF1-223ENST00000496360 MRVI1Q9Y6F6 885 aa17.71■□□□□ 0.43
MACF1-223ENST00000496360 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.43
MACF1-223ENST00000496360 RBM43Q6ZSC3 357 aaKnown RBP17.71■□□□□ 0.43
MACF1-223ENST00000496360 NOL10Q9BSC4 688 aaKnown RBP17.71■□□□□ 0.43
MACF1-223ENST00000496360 SH2B1Q9NRF2 756 aaPredicted RBP17.71■□□□□ 0.43
MACF1-223ENST00000496360 CCT4P50991 539 aaKnown RBP17.7■□□□□ 0.42
MACF1-223ENST00000496360 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
MACF1-223ENST00000496360 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
MACF1-223ENST00000496360 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
MACF1-223ENST00000496360 LRRCC1Q9C099 1032 aa17.7■□□□□ 0.42
MACF1-223ENST00000496360 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
MACF1-223ENST00000496360 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
MACF1-223ENST00000496360 PTPN14Q15678 1187 aa17.7■□□□□ 0.42
MACF1-223ENST00000496360 SARM1Q6SZW1 724 aa17.7■□□□□ 0.42
MACF1-223ENST00000496360 NYAP1Q6ZVC0 841 aa17.7■□□□□ 0.42
MACF1-223ENST00000496360 COG3Q96JB2 828 aa17.7■□□□□ 0.42
MACF1-223ENST00000496360 TRIM5Q9C035 493 aa17.7■□□□□ 0.42
MACF1-223ENST00000496360 EFCC1Q9HA90 598 aa17.7■□□□□ 0.42
MACF1-223ENST00000496360 VGLL3A8MV65 326 aa17.69■□□□□ 0.42
MACF1-223ENST00000496360 SLU7O95391 586 aaKnown RBP17.69■□□□□ 0.42
MACF1-223ENST00000496360 DHX8Q14562 1220 aaKnown RBP17.69■□□□□ 0.42
MACF1-223ENST00000496360 TEX35Q5T0J7 233 aa17.69■□□□□ 0.42
MACF1-223ENST00000496360 NOL8Q76FK4 1167 aaKnown RBP17.69■□□□□ 0.42
MACF1-223ENST00000496360 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
MACF1-223ENST00000496360 UPF3BQ9BZI7 483 aaKnown RBP17.69■□□□□ 0.42
MACF1-223ENST00000496360 RAD50Q92878 1312 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 KRT85P78386 507 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 CBX8Q9HC52 389 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 LTN1O94822 1766 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 ZBTB22O15209 634 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 MUM1L1Q5H9M0 696 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 FAM182BQ5T319 152 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 MEIS3Q99687 375 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 MTMR6Q9Y217 621 aa17.68■□□□□ 0.42
MACF1-223ENST00000496360 SF3B2Q13435 895 aaKnown RBP17.67■□□□□ 0.42
MACF1-223ENST00000496360 MRFAP1L1Q96HT8 127 aa17.67■□□□□ 0.42
MACF1-223ENST00000496360 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
MACF1-223ENST00000496360 POLKQ9UBT6 870 aa17.67■□□□□ 0.42
MACF1-223ENST00000496360 CLIP2Q9UDT6 1046 aa17.67■□□□□ 0.42
MACF1-223ENST00000496360 ZNF215Q9UL58 517 aaPredicted RBP17.67■□□□□ 0.42
MACF1-223ENST00000496360 ATP8B1O43520 1251 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms