RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 C3orf67Q6ZVT6 689 aa22.67■■□□□ 1.22
RHBDD3-207ENST00000496342 ATP5J2-PTCD1G3V325 749 aa22.66■■□□□ 1.22
RHBDD3-207ENST00000496342 CCDC30Q5VVM6 783 aa22.66■■□□□ 1.22
RHBDD3-207ENST00000496342 NLRP10Q86W26 655 aa22.66■■□□□ 1.22
RHBDD3-207ENST00000496342 SYNE4Q8N205 404 aa22.66■■□□□ 1.22
RHBDD3-207ENST00000496342 MASTLQ96GX5 879 aa22.66■■□□□ 1.22
RHBDD3-207ENST00000496342 C21orf2O43822 256 aa22.65■■□□□ 1.22
RHBDD3-207ENST00000496342 PARP10Q53GL7 1025 aa22.65■■□□□ 1.22
RHBDD3-207ENST00000496342 STYK1Q6J9G0 422 aa22.65■■□□□ 1.22
RHBDD3-207ENST00000496342 RIC1Q4ADV7 1423 aa22.65■■□□□ 1.22
RHBDD3-207ENST00000496342 KLRG2A4D1S0 409 aaPredicted RBP22.64■■□□□ 1.21
RHBDD3-207ENST00000496342 HSP90AB3PQ58FF7 597 aa22.64■■□□□ 1.21
RHBDD3-207ENST00000496342 PRPF40BQ6NWY9 871 aaKnown RBP22.64■■□□□ 1.21
RHBDD3-207ENST00000496342 G2E3Q7L622 706 aa22.64■■□□□ 1.21
RHBDD3-207ENST00000496342 PPP1R42Q7Z4L9 355 aa22.64■■□□□ 1.21
RHBDD3-207ENST00000496342 SLC51AQ86UW1 340 aa22.64■■□□□ 1.21
RHBDD3-207ENST00000496342 UTP14AQ9BVJ6 771 aaKnown RBP22.64■■□□□ 1.21
RHBDD3-207ENST00000496342 PDZRN3Q9UPQ7 1066 aa22.64■■□□□ 1.21
RHBDD3-207ENST00000496342 DICER1Q9UPY3 1922 aaKnown RBP22.64■■□□□ 1.21
RHBDD3-207ENST00000496342 PRELPP51888 382 aa22.63■■□□□ 1.21
RHBDD3-207ENST00000496342 GOLGA2Q08379 1002 aa22.63■■□□□ 1.21
RHBDD3-207ENST00000496342 ZNF526Q8TF50 670 aaPredicted RBP22.63■■□□□ 1.21
RHBDD3-207ENST00000496342 NPR1P16066 1061 aa22.62■■□□□ 1.21
RHBDD3-207ENST00000496342 C9orf131Q5VYM1 1079 aa22.62■■□□□ 1.21
RHBDD3-207ENST00000496342 OLFM4Q6UX06 510 aa22.62■■□□□ 1.21
RHBDD3-207ENST00000496342 RIC3Q7Z5B4 369 aa22.62■■□□□ 1.21
RHBDD3-207ENST00000496342 CNKSR1Q969H4 720 aa22.62■■□□□ 1.21
RHBDD3-207ENST00000496342 ISCA1Q9BUE6 129 aa22.62■■□□□ 1.21
RHBDD3-207ENST00000496342 NFKBIEO00221 500 aa22.61■■□□□ 1.21
RHBDD3-207ENST00000496342 VAMP4O75379 141 aa22.61■■□□□ 1.21
RHBDD3-207ENST00000496342 MYD88Q99836 296 aa22.61■■□□□ 1.21
RHBDD3-207ENST00000496342 STK31Q9BXU1 1019 aa22.61■■□□□ 1.21
RHBDD3-207ENST00000496342 HCLS1P14317 486 aaPredicted RBP22.6■■□□□ 1.21
RHBDD3-207ENST00000496342 CRY2Q49AN0 593 aa22.6■■□□□ 1.21
RHBDD3-207ENST00000496342 RTL5Q5HYW3 569 aaPredicted RBP22.6■■□□□ 1.21
RHBDD3-207ENST00000496342 TRMT112Q9UI30 125 aaKnown RBP22.6■■□□□ 1.21
RHBDD3-207ENST00000496342 COL4A1P02462 1669 aa22.6■■□□□ 1.21
RHBDD3-207ENST00000496342 MYH16Q9H6N6 1097 aa22.59■■□□□ 1.21
RHBDD3-207ENST00000496342 RNF181Q9P0P0 153 aa22.59■■□□□ 1.21
RHBDD3-207ENST00000496342 SLC4A2P04920 1241 aa22.58■■□□□ 1.21
RHBDD3-207ENST00000496342 MAP3K2Q9Y2U5 619 aa22.58■■□□□ 1.21
RHBDD3-207ENST00000496342 SH3TC1Q8TE82 1336 aa22.57■■□□□ 1.2
RHBDD3-207ENST00000496342 RPGRQ92834 1020 aaKnown RBP22.57■■□□□ 1.2
RHBDD3-207ENST00000496342 FAM89AQ96GI7 184 aa22.57■■□□□ 1.2
RHBDD3-207ENST00000496342 CDCA7LQ96GN5 454 aa22.57■■□□□ 1.2
RHBDD3-207ENST00000496342 C7orf43Q8WVR3 580 aa22.56■■□□□ 1.2
RHBDD3-207ENST00000496342 JARID2Q92833 1246 aaPredicted RBP22.56■■□□□ 1.2
RHBDD3-207ENST00000496342 MYH3P11055 1940 aa22.56■■□□□ 1.2
RHBDD3-207ENST00000496342 PI4KAP2A4QPH2 592 aa22.55■■□□□ 1.2
RHBDD3-207ENST00000496342 SLC10A5Q5PT55 438 aa22.55■■□□□ 1.2
RHBDD3-207ENST00000496342 PI4KAP1Q8N8J0 262 aa22.55■■□□□ 1.2
RHBDD3-207ENST00000496342 METTL22Q9BUU2 404 aaPredicted RBP22.55■■□□□ 1.2
RHBDD3-207ENST00000496342 RNF123Q5XPI4 1314 aa22.55■■□□□ 1.2
RHBDD3-207ENST00000496342 DDX58O95786 925 aaKnown RBP22.54■■□□□ 1.2
RHBDD3-207ENST00000496342 FLIIQ13045 1269 aa22.54■■□□□ 1.2
RHBDD3-207ENST00000496342 NLRP3Q96P20 1036 aa22.54■■□□□ 1.2
RHBDD3-207ENST00000496342 SPEF2Q9C093 1822 aa22.54■■□□□ 1.2
RHBDD3-207ENST00000496342 KSR2Q6VAB6 950 aa22.53■■□□□ 1.2
RHBDD3-207ENST00000496342 CHMP4AQ9BY43 222 aa22.53■■□□□ 1.2
RHBDD3-207ENST00000496342 ABCC4O15439 1325 aa22.53■■□□□ 1.2
RHBDD3-207ENST00000496342 SNED1Q8TER0 1413 aa22.52■■□□□ 1.2
RHBDD3-207ENST00000496342 HOXA10P31260 410 aaPredicted RBP22.52■■□□□ 1.2
RHBDD3-207ENST00000496342 IGKV5-2P06315 115 aa22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 LMNB1P20700 586 aa22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 ALDH1B1P30837 517 aa22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 SLFN5Q08AF3 891 aa22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 TRIM28Q13263 835 aaKnown RBP22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 CWF19L2Q2TBE0 894 aaKnown RBP22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 CCDC93Q567U6 631 aa22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 RBM17Q96I25 401 aaKnown RBP22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 TAOK3Q9H2K8 898 aa22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 GPBP1L1Q9HC44 474 aaPredicted RBP22.51■■□□□ 1.19
RHBDD3-207ENST00000496342 E9PSI1 815 aa22.5■■□□□ 1.19
RHBDD3-207ENST00000496342 FKBP5Q13451 457 aaPredicted RBP22.5■■□□□ 1.19
RHBDD3-207ENST00000496342 LRRC37AA6NMS7 1700 aa22.5■■□□□ 1.19
RHBDD3-207ENST00000496342 IRS4O14654 1257 aaPredicted RBP22.49■■□□□ 1.19
RHBDD3-207ENST00000496342 PPEF1O14829 653 aaPredicted RBP22.49■■□□□ 1.19
RHBDD3-207ENST00000496342 CRAMP1Q96RY5 1269 aa22.49■■□□□ 1.19
RHBDD3-207ENST00000496342 CWC25Q9NXE8 425 aaPredicted RBP22.49■■□□□ 1.19
RHBDD3-207ENST00000496342 LTBP3Q9NS15 1303 aa22.48■■□□□ 1.19
RHBDD3-207ENST00000496342 COL4A5P29400 1685 aa22.47■■□□□ 1.19
RHBDD3-207ENST00000496342 F6X3S4 739 aa22.47■■□□□ 1.19
RHBDD3-207ENST00000496342 SOGA3Q5TF21 947 aa22.47■■□□□ 1.19
RHBDD3-207ENST00000496342 ZBTB38Q8NAP3 1195 aaPredicted RBP22.47■■□□□ 1.19
RHBDD3-207ENST00000496342 CCDC191Q8NCU4 936 aa22.47■■□□□ 1.19
RHBDD3-207ENST00000496342 NEURL1BA8MQ27 555 aa22.46■■□□□ 1.19
RHBDD3-207ENST00000496342 PCCAP05165 728 aaPredicted RBP22.46■■□□□ 1.19
RHBDD3-207ENST00000496342 DNAAF4Q8WXU2 420 aa22.46■■□□□ 1.19
RHBDD3-207ENST00000496342 NMRK2Q9NPI5 230 aa22.46■■□□□ 1.19
RHBDD3-207ENST00000496342 ZNF277Q9NRM2 450 aaPredicted RBP22.46■■□□□ 1.19
RHBDD3-207ENST00000496342 FKBP4Q02790 459 aaKnown RBP eCLIP22.45■■□□□ 1.18
RHBDD3-207ENST00000496342 CCDC85AQ96PX6 553 aaPredicted RBP22.45■■□□□ 1.18
RHBDD3-207ENST00000496342 NEXNQ0ZGT2 675 aa22.44■■□□□ 1.18
RHBDD3-207ENST00000496342 DDX46Q7L014 1031 aaKnown RBP22.44■■□□□ 1.18
RHBDD3-207ENST00000496342 BCL2L13Q9BXK5 485 aa22.44■■□□□ 1.18
RHBDD3-207ENST00000496342 DUOX1Q9NRD9 1551 aa22.43■■□□□ 1.18
RHBDD3-207ENST00000496342 GRAPQ13588 217 aa22.43■■□□□ 1.18
RHBDD3-207ENST00000496342 SF3B3Q15393 1217 aaKnown RBP22.43■■□□□ 1.18
RHBDD3-207ENST00000496342 TRMT2AQ8IZ69 625 aaKnown RBP22.43■■□□□ 1.18
RHBDD3-207ENST00000496342 GRAPLQ8TC17 118 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms