RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 NLRP10Q86W26 655 aa15.33■□□□□ 0.04
THBS3-208ENST00000496332 PLBD2Q8NHP8 589 aa15.33■□□□□ 0.04
THBS3-208ENST00000496332 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.04
THBS3-208ENST00000496332 LTBP3Q9NS15 1303 aa15.33■□□□□ 0.04
THBS3-208ENST00000496332 RIC1Q4ADV7 1423 aa15.33■□□□□ 0.04
THBS3-208ENST00000496332 TNRC6CQ9HCJ0 1690 aaKnown RBP15.32■□□□□ 0.04
THBS3-208ENST00000496332 HOXA10P31260 410 aaPredicted RBP15.32■□□□□ 0.04
THBS3-208ENST00000496332 SLC10A5Q5PT55 438 aa15.32■□□□□ 0.04
THBS3-208ENST00000496332 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
THBS3-208ENST00000496332 C3orf67Q6ZVT6 689 aa15.32■□□□□ 0.04
THBS3-208ENST00000496332 TSR2Q969E8 191 aaKnown RBP15.32■□□□□ 0.04
THBS3-208ENST00000496332 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
THBS3-208ENST00000496332 RRAGCQ9HB90 399 aa15.32■□□□□ 0.04
THBS3-208ENST00000496332 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
THBS3-208ENST00000496332 RBM17Q96I25 401 aaKnown RBP15.31■□□□□ 0.04
THBS3-208ENST00000496332 TRMT112Q9UI30 125 aaKnown RBP15.31■□□□□ 0.04
THBS3-208ENST00000496332 GLTPD2A6NH11 291 aa15.3■□□□□ 0.04
THBS3-208ENST00000496332 TOMM70O94826 608 aa15.3■□□□□ 0.04
THBS3-208ENST00000496332 CACNA1SQ13698 1873 aa15.3■□□□□ 0.04
THBS3-208ENST00000496332 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
THBS3-208ENST00000496332 RTKN2Q8IZC4 609 aa15.3■□□□□ 0.04
THBS3-208ENST00000496332 TSPYL6Q8N831 410 aa15.3■□□□□ 0.04
THBS3-208ENST00000496332 PHAXQ9H814 394 aaKnown RBP15.3■□□□□ 0.04
THBS3-208ENST00000496332 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
THBS3-208ENST00000496332 ARFGEF2Q9Y6D5 1785 aa15.3■□□□□ 0.04
THBS3-208ENST00000496332 FER1L6Q2WGJ9 1857 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 IL16Q14005 1332 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 ATP5J2-PTCD1G3V325 749 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 HCLS1P14317 486 aaPredicted RBP15.29■□□□□ 0.04
THBS3-208ENST00000496332 FKBP4Q02790 459 aaKnown RBP eCLIP15.29■□□□□ 0.04
THBS3-208ENST00000496332 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 C16orf71Q8IYS4 520 aaPredicted RBP15.29■□□□□ 0.04
THBS3-208ENST00000496332 FAM9BQ8IZU0 186 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 SYNE4Q8N205 404 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 ZNF428Q96B54 188 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 CRAMP1Q96RY5 1269 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 ISCA1Q9BUE6 129 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 CHMP4AQ9BY43 222 aa15.29■□□□□ 0.04
THBS3-208ENST00000496332 SH3TC1Q8TE82 1336 aa15.28■□□□□ 0.04
THBS3-208ENST00000496332 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
THBS3-208ENST00000496332 DPY19L2Q6NUT2 758 aa15.28■□□□□ 0.04
THBS3-208ENST00000496332 RIC3Q7Z5B4 369 aa15.28■□□□□ 0.04
THBS3-208ENST00000496332 ZNF277Q9NRM2 450 aaPredicted RBP15.28■□□□□ 0.04
THBS3-208ENST00000496332 TCERG1O14776 1098 aaKnown RBP15.27■□□□□ 0.04
THBS3-208ENST00000496332 ANKRD36CQ5JPF3 1778 aa15.26■□□□□ 0.03
THBS3-208ENST00000496332 TIAM2Q8IVF5 1701 aa15.26■□□□□ 0.03
THBS3-208ENST00000496332 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
THBS3-208ENST00000496332 VEGFAP15692 232 aaPredicted RBP15.26■□□□□ 0.03
THBS3-208ENST00000496332 HSPA6P17066 643 aa15.26■□□□□ 0.03
THBS3-208ENST00000496332 CC2D2BQ6DHV5 1058 aa15.26■□□□□ 0.03
THBS3-208ENST00000496332 WDR63Q8IWG1 891 aa15.26■□□□□ 0.03
THBS3-208ENST00000496332 RBM46Q8TBY0 533 aaKnown RBP15.26■□□□□ 0.03
THBS3-208ENST00000496332 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
THBS3-208ENST00000496332 CCDC88AQ3V6T2 1871 aa15.26■□□□□ 0.03
THBS3-208ENST00000496332 ABCC4O15439 1325 aa15.25■□□□□ 0.03
THBS3-208ENST00000496332 CEP350Q5VT06 3117 aa15.25■□□□□ 0.03
THBS3-208ENST00000496332 TRIM28Q13263 835 aaKnown RBP15.25■□□□□ 0.03
THBS3-208ENST00000496332 TWISTNBQ3B726 338 aaPredicted RBP15.25■□□□□ 0.03
THBS3-208ENST00000496332 SLC51AQ86UW1 340 aa15.25■□□□□ 0.03
THBS3-208ENST00000496332 PSMD1Q99460 953 aa15.25■□□□□ 0.03
THBS3-208ENST00000496332 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
THBS3-208ENST00000496332 IARSP41252 1262 aaKnown RBP15.24■□□□□ 0.03
THBS3-208ENST00000496332 GRIPAP1Q4V328 841 aa15.24■□□□□ 0.03
THBS3-208ENST00000496332 RTL5Q5HYW3 569 aaPredicted RBP15.24■□□□□ 0.03
THBS3-208ENST00000496332 MYD88Q99836 296 aa15.24■□□□□ 0.03
THBS3-208ENST00000496332 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
THBS3-208ENST00000496332 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
THBS3-208ENST00000496332 FANCIQ9NVI1 1328 aa15.23■□□□□ 0.03
THBS3-208ENST00000496332 POTECB2RU33 542 aa15.23■□□□□ 0.03
THBS3-208ENST00000496332 BBOX1O75936 387 aa15.23■□□□□ 0.03
THBS3-208ENST00000496332 DDNO94850 711 aaPredicted RBP15.23■□□□□ 0.03
THBS3-208ENST00000496332 DDX46Q7L014 1031 aaKnown RBP15.23■□□□□ 0.03
THBS3-208ENST00000496332 TMX4Q9H1E5 349 aaPredicted RBP15.23■□□□□ 0.03
THBS3-208ENST00000496332 ATP6V0A2Q9Y487 856 aa15.23■□□□□ 0.03
THBS3-208ENST00000496332 DICER1Q9UPY3 1922 aaKnown RBP15.22■□□□□ 0.03
THBS3-208ENST00000496332 FSTL1Q12841 308 aa15.22■□□□□ 0.03
THBS3-208ENST00000496332 METTL22Q9BUU2 404 aaPredicted RBP15.22■□□□□ 0.03
THBS3-208ENST00000496332 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
THBS3-208ENST00000496332 SLC4A2P04920 1241 aa15.21■□□□□ 0.03
THBS3-208ENST00000496332 GRAPQ13588 217 aa15.21■□□□□ 0.03
THBS3-208ENST00000496332 KSR2Q6VAB6 950 aa15.21■□□□□ 0.03
THBS3-208ENST00000496332 ZBTB38Q8NAP3 1195 aaPredicted RBP15.21■□□□□ 0.03
THBS3-208ENST00000496332 GRAPLQ8TC17 118 aaPredicted RBP15.21■□□□□ 0.03
THBS3-208ENST00000496332 MAP3K2Q9Y2U5 619 aa15.21■□□□□ 0.03
THBS3-208ENST00000496332 ZNF541Q9H0D2 1346 aa15.2■□□□□ 0.02
THBS3-208ENST00000496332 PI4KAP2A4QPH2 592 aa15.2■□□□□ 0.02
THBS3-208ENST00000496332 EXOSC9Q06265 439 aaKnown RBP15.2■□□□□ 0.02
THBS3-208ENST00000496332 SF3B3Q15393 1217 aaKnown RBP15.2■□□□□ 0.02
THBS3-208ENST00000496332 G2E3Q7L622 706 aa15.2■□□□□ 0.02
THBS3-208ENST00000496332 SP8Q8IXZ3 490 aa15.2■□□□□ 0.02
THBS3-208ENST00000496332 PI4KAP1Q8N8J0 262 aa15.2■□□□□ 0.02
THBS3-208ENST00000496332 CCDC191Q8NCU4 936 aa15.2■□□□□ 0.02
THBS3-208ENST00000496332 SMC1BQ8NDV3 1235 aa15.2■□□□□ 0.02
THBS3-208ENST00000496332 JDP2Q8WYK2 163 aa15.2■□□□□ 0.02
THBS3-208ENST00000496332 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
THBS3-208ENST00000496332 CWC25Q9NXE8 425 aaPredicted RBP15.2■□□□□ 0.02
THBS3-208ENST00000496332 WDR90Q96KV7 1748 aa15.2■□□□□ 0.02
THBS3-208ENST00000496332 FZD9O00144 591 aa15.19■□□□□ 0.02
THBS3-208ENST00000496332 VAMP4O75379 141 aa15.19■□□□□ 0.02
THBS3-208ENST00000496332 APLP1P51693 650 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms