RNA–Protein interactions for RNA: ENST00000496015.5

ABCD4-217, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 1,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-217ENST00000496015 ANKRD36CQ5JPF3 1778 aa17.71■□□□□ 0.43
ABCD4-217ENST00000496015 ABCC12Q96J65 1359 aa17.71■□□□□ 0.43
ABCD4-217ENST00000496015 ZNF316A6NFI3 1004 aaPredicted RBP17.71■□□□□ 0.43
ABCD4-217ENST00000496015 APLP1P51693 650 aa17.71■□□□□ 0.43
ABCD4-217ENST00000496015 GNAI1P63096 354 aa17.71■□□□□ 0.43
ABCD4-217ENST00000496015 FSTL1Q12841 308 aa17.71■□□□□ 0.43
ABCD4-217ENST00000496015 KRT24Q2M2I5 525 aa17.71■□□□□ 0.43
ABCD4-217ENST00000496015 RBM17Q96I25 401 aaKnown RBP17.71■□□□□ 0.43
ABCD4-217ENST00000496015 IFT57Q9NWB7 429 aa17.71■□□□□ 0.43
ABCD4-217ENST00000496015 CHPF2Q9P2E5 772 aa17.71■□□□□ 0.43
ABCD4-217ENST00000496015 RNF123Q5XPI4 1314 aa17.71■□□□□ 0.42
ABCD4-217ENST00000496015 NTSR2O95665 410 aa17.7■□□□□ 0.42
ABCD4-217ENST00000496015 FKBP4Q02790 459 aaKnown RBP eCLIP17.7■□□□□ 0.42
ABCD4-217ENST00000496015 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
ABCD4-217ENST00000496015 CC2D2BQ6DHV5 1058 aa17.7■□□□□ 0.42
ABCD4-217ENST00000496015 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
ABCD4-217ENST00000496015 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
ABCD4-217ENST00000496015 MBIPQ9NS73 344 aa17.7■□□□□ 0.42
ABCD4-217ENST00000496015 ANP32CO43423 234 aa17.69■□□□□ 0.42
ABCD4-217ENST00000496015 HOXA10P31260 410 aaPredicted RBP17.69■□□□□ 0.42
ABCD4-217ENST00000496015 TCIRG1Q13488 830 aa17.69■□□□□ 0.42
ABCD4-217ENST00000496015 GRIPAP1Q4V328 841 aa17.69■□□□□ 0.42
ABCD4-217ENST00000496015 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
ABCD4-217ENST00000496015 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
ABCD4-217ENST00000496015 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
ABCD4-217ENST00000496015 SMC1BQ8NDV3 1235 aa17.68■□□□□ 0.42
ABCD4-217ENST00000496015 CRAMP1Q96RY5 1269 aa17.68■□□□□ 0.42
ABCD4-217ENST00000496015 SLC10A5Q5PT55 438 aa17.67■□□□□ 0.42
ABCD4-217ENST00000496015 ANKRD13DQ6ZTN6 518 aa17.67■□□□□ 0.42
ABCD4-217ENST00000496015 PLBD2Q8NHP8 589 aa17.67■□□□□ 0.42
ABCD4-217ENST00000496015 WDR90Q96KV7 1748 aa17.67■□□□□ 0.42
ABCD4-217ENST00000496015 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
ABCD4-217ENST00000496015 ZNF277Q9NRM2 450 aaPredicted RBP17.66■□□□□ 0.42
ABCD4-217ENST00000496015 TRMT112Q9UI30 125 aaKnown RBP17.66■□□□□ 0.42
ABCD4-217ENST00000496015 OLFM4Q6UX06 510 aa17.65■□□□□ 0.42
ABCD4-217ENST00000496015 SYNE4Q8N205 404 aa17.65■□□□□ 0.42
ABCD4-217ENST00000496015 PSMD1Q99460 953 aa17.65■□□□□ 0.42
ABCD4-217ENST00000496015 MRS2Q9HD23 443 aa17.65■□□□□ 0.42
ABCD4-217ENST00000496015 SH3TC1Q8TE82 1336 aa17.65■□□□□ 0.42
ABCD4-217ENST00000496015 PPEF1O14829 653 aaPredicted RBP17.64■□□□□ 0.41
ABCD4-217ENST00000496015 IQCA1LA6NCM1 817 aa17.63■□□□□ 0.41
ABCD4-217ENST00000496015 ELL2O00472 640 aaPredicted RBP17.63■□□□□ 0.41
ABCD4-217ENST00000496015 DDNO94850 711 aaPredicted RBP17.63■□□□□ 0.41
ABCD4-217ENST00000496015 IARSP41252 1262 aaKnown RBP17.63■□□□□ 0.41
ABCD4-217ENST00000496015 GOLGA2Q08379 1002 aa17.63■□□□□ 0.41
ABCD4-217ENST00000496015 CCDC184Q52MB2 194 aa17.63■□□□□ 0.41
ABCD4-217ENST00000496015 JDP2Q8WYK2 163 aa17.63■□□□□ 0.41
ABCD4-217ENST00000496015 CCDC27Q2M243 656 aa17.62■□□□□ 0.41
ABCD4-217ENST00000496015 C3orf67Q6ZVT6 689 aa17.62■□□□□ 0.41
ABCD4-217ENST00000496015 LAMB2P55268 1798 aa17.61■□□□□ 0.41
ABCD4-217ENST00000496015 SCN4AP35499 1836 aa17.61■□□□□ 0.41
ABCD4-217ENST00000496015 POTECB2RU33 542 aa17.61■□□□□ 0.41
ABCD4-217ENST00000496015 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
ABCD4-217ENST00000496015 BBOX1O75936 387 aa17.61■□□□□ 0.41
ABCD4-217ENST00000496015 HCLS1P14317 486 aaPredicted RBP17.61■□□□□ 0.41
ABCD4-217ENST00000496015 CCDC30Q5VVM6 783 aa17.61■□□□□ 0.41
ABCD4-217ENST00000496015 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
ABCD4-217ENST00000496015 RIC3Q7Z5B4 369 aa17.61■□□□□ 0.41
ABCD4-217ENST00000496015 ATP6V0A2Q9Y487 856 aa17.6■□□□□ 0.41
ABCD4-217ENST00000496015 ABCC4O15439 1325 aa17.59■□□□□ 0.41
ABCD4-217ENST00000496015 ATP5J2-PTCD1G3V325 749 aa17.59■□□□□ 0.41
ABCD4-217ENST00000496015 DDX58O95786 925 aaKnown RBP17.59■□□□□ 0.41
ABCD4-217ENST00000496015 HSP90B1P14625 803 aaKnown RBP17.59■□□□□ 0.41
ABCD4-217ENST00000496015 TRIM28Q13263 835 aaKnown RBP17.59■□□□□ 0.41
ABCD4-217ENST00000496015 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
ABCD4-217ENST00000496015 WWC1Q8IX03 1113 aa17.59■□□□□ 0.41
ABCD4-217ENST00000496015 C8orf58Q8NAV2 365 aa17.59■□□□□ 0.41
ABCD4-217ENST00000496015 L3MBTL3Q96JM7 780 aaPredicted RBP17.59■□□□□ 0.41
ABCD4-217ENST00000496015 ISCA1Q9BUE6 129 aa17.59■□□□□ 0.41
ABCD4-217ENST00000496015 FZD9O00144 591 aa17.58■□□□□ 0.4
ABCD4-217ENST00000496015 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.4
ABCD4-217ENST00000496015 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
ABCD4-217ENST00000496015 LARGE2Q8N3Y3 721 aa17.58■□□□□ 0.4
ABCD4-217ENST00000496015 SUPT20HQ8NEM7 779 aa17.58■□□□□ 0.4
ABCD4-217ENST00000496015 SNED1Q8TER0 1413 aa17.57■□□□□ 0.4
ABCD4-217ENST00000496015 ZNF541Q9H0D2 1346 aa17.57■□□□□ 0.4
ABCD4-217ENST00000496015 SP8Q8IXZ3 490 aa17.57■□□□□ 0.4
ABCD4-217ENST00000496015 GPC2Q8N158 579 aa17.57■□□□□ 0.4
ABCD4-217ENST00000496015 FAM89AQ96GI7 184 aa17.57■□□□□ 0.4
ABCD4-217ENST00000496015 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
ABCD4-217ENST00000496015 VPS33BQ9H267 617 aa17.57■□□□□ 0.4
ABCD4-217ENST00000496015 PHAXQ9H814 394 aaKnown RBP17.57■□□□□ 0.4
ABCD4-217ENST00000496015 DDX60Q8IY21 1712 aaKnown RBP17.56■□□□□ 0.4
ABCD4-217ENST00000496015 IL16Q14005 1332 aa17.56■□□□□ 0.4
ABCD4-217ENST00000496015 GRAPQ13588 217 aa17.56■□□□□ 0.4
ABCD4-217ENST00000496015 CHADLQ6NUI6 762 aa17.56■□□□□ 0.4
ABCD4-217ENST00000496015 DPP8Q6V1X1 898 aaPredicted RBP17.56■□□□□ 0.4
ABCD4-217ENST00000496015 NIM1KQ8IY84 436 aa17.56■□□□□ 0.4
ABCD4-217ENST00000496015 GRAPLQ8TC17 118 aaPredicted RBP17.56■□□□□ 0.4
ABCD4-217ENST00000496015 TSR2Q969E8 191 aaKnown RBP17.56■□□□□ 0.4
ABCD4-217ENST00000496015 HACL1Q9UJ83 578 aa17.56■□□□□ 0.4
ABCD4-217ENST00000496015 DNAJC5GQ8N7S2 189 aa17.55■□□□□ 0.4
ABCD4-217ENST00000496015 ZNF428Q96B54 188 aa17.55■□□□□ 0.4
ABCD4-217ENST00000496015 TAF1DQ9H5J8 278 aaPredicted RBP17.55■□□□□ 0.4
ABCD4-217ENST00000496015 TAF1P21675 1872 aa17.54■□□□□ 0.4
ABCD4-217ENST00000496015 IRS4O14654 1257 aaPredicted RBP17.54■□□□□ 0.4
ABCD4-217ENST00000496015 PPIP5K2O43314 1243 aa17.54■□□□□ 0.4
ABCD4-217ENST00000496015 SF3B3Q15393 1217 aaKnown RBP17.54■□□□□ 0.4
ABCD4-217ENST00000496015 PNMA8AQ86V59 439 aaPredicted RBP17.54■□□□□ 0.4
ABCD4-217ENST00000496015 LDHDQ86WU2 507 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms