RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 MTMR6Q9Y217 621 aa11.78□□□□□ -0.52
SURF1-204ENST00000495952 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.52
SURF1-204ENST00000495952 GCP02774 474 aa11.77□□□□□ -0.53
SURF1-204ENST00000495952 KRT32Q14532 448 aa11.77□□□□□ -0.53
SURF1-204ENST00000495952 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
SURF1-204ENST00000495952 SASS6Q6UVJ0 657 aa11.77□□□□□ -0.53
SURF1-204ENST00000495952 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.53
SURF1-204ENST00000495952 ANKRD24Q8TF21 1146 aa11.77□□□□□ -0.53
SURF1-204ENST00000495952 JAKMIP1Q96N16 626 aaKnown RBP11.77□□□□□ -0.53
SURF1-204ENST00000495952 PDCL3Q9H2J4 239 aa11.77□□□□□ -0.53
SURF1-204ENST00000495952 MYH7P12883 1935 aa11.77□□□□□ -0.53
SURF1-204ENST00000495952 C1orf167Q5SNV9 1468 aa11.76□□□□□ -0.53
SURF1-204ENST00000495952 DYNC1I1O14576 645 aa11.76□□□□□ -0.53
SURF1-204ENST00000495952 KCNQ3O43525 872 aa11.76□□□□□ -0.53
SURF1-204ENST00000495952 GADD45BO75293 160 aaPredicted RBP11.76□□□□□ -0.53
SURF1-204ENST00000495952 GJB2P29033 226 aa11.76□□□□□ -0.53
SURF1-204ENST00000495952 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.53
SURF1-204ENST00000495952 FOXD4L5Q5VV16 416 aaPredicted RBP11.76□□□□□ -0.53
SURF1-204ENST00000495952 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
SURF1-204ENST00000495952 AACSQ86V21 672 aa11.76□□□□□ -0.53
SURF1-204ENST00000495952 FOXD4L4Q8WXT5 416 aaPredicted RBP11.76□□□□□ -0.53
SURF1-204ENST00000495952 USP25Q9UHP3 1055 aa11.76□□□□□ -0.53
SURF1-204ENST00000495952 CNPY2Q9Y2B0 182 aa11.76□□□□□ -0.53
SURF1-204ENST00000495952 RBM8AQ9Y5S9 174 aaKnown RBP11.76□□□□□ -0.53
SURF1-204ENST00000495952 ERBB3P21860 1342 aa11.76□□□□□ -0.53
SURF1-204ENST00000495952 MAP4K4O95819 1239 aaPredicted RBP11.75□□□□□ -0.53
SURF1-204ENST00000495952 PTMAP06454 111 aaKnown RBP11.75□□□□□ -0.53
SURF1-204ENST00000495952 KRT85P78386 507 aa11.75□□□□□ -0.53
SURF1-204ENST00000495952 PTH1RQ03431 593 aa11.75□□□□□ -0.53
SURF1-204ENST00000495952 NEXNQ0ZGT2 675 aa11.75□□□□□ -0.53
SURF1-204ENST00000495952 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
SURF1-204ENST00000495952 SUCLG2Q96I99 432 aa11.75□□□□□ -0.53
SURF1-204ENST00000495952 SPG7Q9UQ90 795 aa11.75□□□□□ -0.53
SURF1-204ENST00000495952 TMEM94Q12767 1356 aa11.75□□□□□ -0.53
SURF1-204ENST00000495952 SASH1O94885 1247 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 LARGE1O95461 756 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 ESCO1Q5FWF5 840 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 PRPF40BQ6NWY9 871 aaKnown RBP11.74□□□□□ -0.53
SURF1-204ENST00000495952 MPRIPQ6WCQ1 1025 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 PIBF1Q8WXW3 757 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 LRRC59Q96AG4 307 aaKnown RBP11.74□□□□□ -0.53
SURF1-204ENST00000495952 KAZALD1Q96I82 304 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 CHAMP1Q96JM3 812 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
SURF1-204ENST00000495952 COPRSQ9NQ92 184 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
SURF1-204ENST00000495952 SLC27A2O14975 620 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 RPS6KB1P23443 525 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 HMGN5P82970 282 aaKnown RBP11.73□□□□□ -0.53
SURF1-204ENST00000495952 ST3GAL1Q11201 340 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 NMIQ13287 307 aaPredicted RBP11.73□□□□□ -0.53
SURF1-204ENST00000495952 PDIA6Q15084 440 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 PROSER3Q2NL68 480 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 ADCK5Q3MIX3 580 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 RABL6Q3YEC7 729 aaPredicted RBP11.73□□□□□ -0.53
SURF1-204ENST00000495952 BLOC1S2Q6QNY1 142 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 NPHP3Q7Z494 1330 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 RNF214Q8ND24 703 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 METTL22Q9BUU2 404 aaPredicted RBP11.73□□□□□ -0.53
SURF1-204ENST00000495952 SHANK3Q9BYB0 1731 aa11.73□□□□□ -0.53
SURF1-204ENST00000495952 SCAND2PQ9GZW5 306 aaPredicted RBP11.73□□□□□ -0.53
SURF1-204ENST00000495952 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
SURF1-204ENST00000495952 ABCA3Q99758 1704 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 MEGF6O75095 1541 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 NEURL1BA8MQ27 555 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 GOLGA6L6A8MZA4 724 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 FIBPO43427 364 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 KDM4AO75164 1064 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 CCDC192P0DO97 292 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 ATP5JP18859 108 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 ME3Q16798 604 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 CWF19L2Q2TBE0 894 aaKnown RBP11.72□□□□□ -0.53
SURF1-204ENST00000495952 CHMP4CQ96CF2 233 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 EAF2Q96CJ1 260 aaPredicted RBP11.72□□□□□ -0.53
SURF1-204ENST00000495952 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 GDPD2Q9HCC8 539 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 DDX19AQ9NUU7 478 aaKnown RBP11.72□□□□□ -0.53
SURF1-204ENST00000495952 SPTLC3Q9NUV7 552 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
SURF1-204ENST00000495952 SH3TC1Q8TE82 1336 aa11.71□□□□□ -0.53
SURF1-204ENST00000495952 CAVIN2O95810 425 aa11.71□□□□□ -0.53
SURF1-204ENST00000495952 ANXA1P04083 346 aa11.71□□□□□ -0.53
SURF1-204ENST00000495952 IGKV5-2P06315 115 aa11.71□□□□□ -0.53
SURF1-204ENST00000495952 KCNJ4P48050 445 aa11.71□□□□□ -0.53
SURF1-204ENST00000495952 XPCQ01831 940 aaPredicted RBP11.71□□□□□ -0.53
SURF1-204ENST00000495952 GCKRQ14397 625 aa11.71□□□□□ -0.53
SURF1-204ENST00000495952 ZNF790Q6PG37 636 aa11.71□□□□□ -0.53
SURF1-204ENST00000495952 RBM43Q6ZSC3 357 aaKnown RBP11.71□□□□□ -0.53
SURF1-204ENST00000495952 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.53
SURF1-204ENST00000495952 R3HCC1Q9Y3T6 440 aaKnown RBP11.71□□□□□ -0.53
SURF1-204ENST00000495952 U3KPZ7 1027 aaPredicted RBP11.71□□□□□ -0.53
SURF1-204ENST00000495952 UQCRHLA0A096LP55 91 aa11.7□□□□□ -0.54
SURF1-204ENST00000495952 ADCY5O95622 1261 aa11.7□□□□□ -0.54
SURF1-204ENST00000495952 UQCRHP07919 91 aa11.7□□□□□ -0.54
SURF1-204ENST00000495952 HCLS1P14317 486 aaPredicted RBP11.7□□□□□ -0.54
SURF1-204ENST00000495952 TATP17735 454 aaPredicted RBP11.7□□□□□ -0.54
SURF1-204ENST00000495952 GTF2F1P35269 517 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms