RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ANKRD36CQ5JPF3 1778 aa31.45■■■□□ 2.63
HLA-C-209ENST00000495835 ABCC12Q96J65 1359 aa31.45■■■□□ 2.63
HLA-C-209ENST00000495835 GLTPD2A6NH11 291 aa31.45■■■□□ 2.63
HLA-C-209ENST00000495835 CCDC93Q567U6 631 aa31.45■■■□□ 2.63
HLA-C-209ENST00000495835 HYPKQ9NX55 129 aa31.45■■■□□ 2.63
HLA-C-209ENST00000495835 CHPF2Q9P2E5 772 aa31.45■■■□□ 2.63
HLA-C-209ENST00000495835 HOXA10P31260 410 aaPredicted RBP31.44■■■□□ 2.62
HLA-C-209ENST00000495835 AIMP1Q12904 312 aaKnown RBP31.44■■■□□ 2.62
HLA-C-209ENST00000495835 UTP14AQ9BVJ6 771 aaKnown RBP31.44■■■□□ 2.62
HLA-C-209ENST00000495835 TIAM2Q8IVF5 1701 aa31.44■■■□□ 2.62
HLA-C-209ENST00000495835 TCIRG1Q13488 830 aa31.43■■■□□ 2.62
HLA-C-209ENST00000495835 SLC10A5Q5PT55 438 aa31.43■■■□□ 2.62
HLA-C-209ENST00000495835 RTKN2Q8IZC4 609 aa31.43■■■□□ 2.62
HLA-C-209ENST00000495835 DPY19L2Q6NUT2 758 aa31.42■■■□□ 2.62
HLA-C-209ENST00000495835 PLBD2Q8NHP8 589 aa31.42■■■□□ 2.62
HLA-C-209ENST00000495835 MRS2Q9HD23 443 aa31.42■■■□□ 2.62
HLA-C-209ENST00000495835 CC2D2BQ6DHV5 1058 aa31.41■■■□□ 2.62
HLA-C-209ENST00000495835 RPGRQ92834 1020 aaKnown RBP31.41■■■□□ 2.62
HLA-C-209ENST00000495835 HSPA6P17066 643 aa31.4■■■□□ 2.62
HLA-C-209ENST00000495835 GRIPAP1Q4V328 841 aa31.4■■■□□ 2.62
HLA-C-209ENST00000495835 ANKRD13DQ6ZTN6 518 aa31.4■■■□□ 2.62
HLA-C-209ENST00000495835 C16orf71Q8IYS4 520 aaPredicted RBP31.4■■■□□ 2.62
HLA-C-209ENST00000495835 RBM46Q8TBY0 533 aaKnown RBP31.4■■■□□ 2.62
HLA-C-209ENST00000495835 NLRP3Q96P20 1036 aa31.4■■■□□ 2.62
HLA-C-209ENST00000495835 CRAMP1Q96RY5 1269 aa31.4■■■□□ 2.62
HLA-C-209ENST00000495835 NLRP10Q86W26 655 aa31.39■■■□□ 2.62
HLA-C-209ENST00000495835 RRAGCQ9HB90 399 aa31.39■■■□□ 2.62
HLA-C-209ENST00000495835 FKBP4Q02790 459 aaKnown RBP eCLIP31.38■■■□□ 2.61
HLA-C-209ENST00000495835 RBM17Q96I25 401 aaKnown RBP31.38■■■□□ 2.61
HLA-C-209ENST00000495835 CEP350Q5VT06 3117 aa31.38■■■□□ 2.61
HLA-C-209ENST00000495835 VEGFAP15692 232 aaPredicted RBP31.36■■■□□ 2.61
HLA-C-209ENST00000495835 WWC1Q8IX03 1113 aa31.35■■■□□ 2.61
HLA-C-209ENST00000495835 IL16Q14005 1332 aa31.34■■■□□ 2.61
HLA-C-209ENST00000495835 FSTL1Q12841 308 aa31.33■■■□□ 2.61
HLA-C-209ENST00000495835 PSMD1Q99460 953 aa31.33■■■□□ 2.61
HLA-C-209ENST00000495835 TRMT112Q9UI30 125 aaKnown RBP31.33■■■□□ 2.61
HLA-C-209ENST00000495835 TRIM28Q13263 835 aaKnown RBP31.32■■■□□ 2.6
HLA-C-209ENST00000495835 C8orf58Q8NAV2 365 aa31.32■■■□□ 2.6
HLA-C-209ENST00000495835 ISCA1Q9BUE6 129 aa31.32■■■□□ 2.6
HLA-C-209ENST00000495835 WDR90Q96KV7 1748 aa31.32■■■□□ 2.6
HLA-C-209ENST00000495835 SH3TC1Q8TE82 1336 aa31.31■■■□□ 2.6
HLA-C-209ENST00000495835 CCDC30Q5VVM6 783 aa31.31■■■□□ 2.6
HLA-C-209ENST00000495835 ELL2O00472 640 aaPredicted RBP31.3■■■□□ 2.6
HLA-C-209ENST00000495835 SNED1Q8TER0 1413 aa31.3■■■□□ 2.6
HLA-C-209ENST00000495835 GOLGA2Q08379 1002 aa31.28■■■□□ 2.6
HLA-C-209ENST00000495835 OLFM4Q6UX06 510 aa31.28■■■□□ 2.6
HLA-C-209ENST00000495835 C3orf67Q6ZVT6 689 aa31.28■■■□□ 2.6
HLA-C-209ENST00000495835 SYNE4Q8N205 404 aa31.28■■■□□ 2.6
HLA-C-209ENST00000495835 TMX4Q9H1E5 349 aaPredicted RBP31.27■■■□□ 2.6
HLA-C-209ENST00000495835 PPEF1O14829 653 aaPredicted RBP31.26■■■□□ 2.59
HLA-C-209ENST00000495835 BBOX1O75936 387 aa31.26■■■□□ 2.59
HLA-C-209ENST00000495835 IARSP41252 1262 aaKnown RBP31.26■■■□□ 2.59
HLA-C-209ENST00000495835 APLP1P51693 650 aa31.26■■■□□ 2.59
HLA-C-209ENST00000495835 RIC3Q7Z5B4 369 aa31.26■■■□□ 2.59
HLA-C-209ENST00000495835 ZNF277Q9NRM2 450 aaPredicted RBP31.26■■■□□ 2.59
HLA-C-209ENST00000495835 LAMB2P55268 1798 aa31.25■■■□□ 2.59
HLA-C-209ENST00000495835 WDR63Q8IWG1 891 aa31.25■■■□□ 2.59
HLA-C-209ENST00000495835 SMC1BQ8NDV3 1235 aa31.25■■■□□ 2.59
HLA-C-209ENST00000495835 PHAXQ9H814 394 aaKnown RBP31.25■■■□□ 2.59
HLA-C-209ENST00000495835 POTECB2RU33 542 aa31.23■■■□□ 2.59
HLA-C-209ENST00000495835 DDX58O95786 925 aaKnown RBP31.23■■■□□ 2.59
HLA-C-209ENST00000495835 HCLS1P14317 486 aaPredicted RBP31.23■■■□□ 2.59
HLA-C-209ENST00000495835 VPS33BQ9H267 617 aa31.23■■■□□ 2.59
HLA-C-209ENST00000495835 ATP6V0A2Q9Y487 856 aa31.23■■■□□ 2.59
HLA-C-209ENST00000495835 DDX46Q7L014 1031 aaKnown RBP31.22■■■□□ 2.59
HLA-C-209ENST00000495835 TSPYL6Q8N831 410 aa31.22■■■□□ 2.59
HLA-C-209ENST00000495835 TSR2Q969E8 191 aaKnown RBP31.22■■■□□ 2.59
HLA-C-209ENST00000495835 ABCC4O15439 1325 aa31.22■■■□□ 2.59
HLA-C-209ENST00000495835 ATP5J2-PTCD1G3V325 749 aa31.21■■■□□ 2.59
HLA-C-209ENST00000495835 DDNO94850 711 aaPredicted RBP31.21■■■□□ 2.59
HLA-C-209ENST00000495835 HSP90B1P14625 803 aaKnown RBP31.21■■■□□ 2.59
HLA-C-209ENST00000495835 TMC4Q7Z404 712 aa31.21■■■□□ 2.59
HLA-C-209ENST00000495835 JDP2Q8WYK2 163 aa31.21■■■□□ 2.59
HLA-C-209ENST00000495835 L3MBTL3Q96JM7 780 aaPredicted RBP31.21■■■□□ 2.59
HLA-C-209ENST00000495835 FZD9O00144 591 aa31.2■■■□□ 2.59
HLA-C-209ENST00000495835 STK31Q9BXU1 1019 aa31.2■■■□□ 2.59
HLA-C-209ENST00000495835 DDX60Q8IY21 1712 aaKnown RBP31.19■■■□□ 2.58
HLA-C-209ENST00000495835 SF3B3Q15393 1217 aaKnown RBP31.19■■■□□ 2.58
HLA-C-209ENST00000495835 TWISTNBQ3B726 338 aaPredicted RBP31.19■■■□□ 2.58
HLA-C-209ENST00000495835 SP8Q8IXZ3 490 aa31.19■■■□□ 2.58
HLA-C-209ENST00000495835 FAM89AQ96GI7 184 aa31.19■■■□□ 2.58
HLA-C-209ENST00000495835 SCN4AP35499 1836 aa31.19■■■□□ 2.58
HLA-C-209ENST00000495835 IQCA1LA6NCM1 817 aa31.18■■■□□ 2.58
HLA-C-209ENST00000495835 GRAPQ13588 217 aa31.18■■■□□ 2.58
HLA-C-209ENST00000495835 CCDC191Q8NCU4 936 aa31.18■■■□□ 2.58
HLA-C-209ENST00000495835 GRAPLQ8TC17 118 aaPredicted RBP31.18■■■□□ 2.58
HLA-C-209ENST00000495835 ZBTB38Q8NAP3 1195 aaPredicted RBP31.17■■■□□ 2.58
HLA-C-209ENST00000495835 SUPT20HQ8NEM7 779 aa31.16■■■□□ 2.58
HLA-C-209ENST00000495835 METTL22Q9BUU2 404 aaPredicted RBP31.16■■■□□ 2.58
HLA-C-209ENST00000495835 CACNA1FO60840 1977 aa31.16■■■□□ 2.58
HLA-C-209ENST00000495835 RTFDC1Q9BY42 306 aaPredicted RBP31.15■■■□□ 2.58
HLA-C-209ENST00000495835 KSR2Q6VAB6 950 aa31.14■■■□□ 2.58
HLA-C-209ENST00000495835 MYD88Q99836 296 aa31.14■■■□□ 2.58
HLA-C-209ENST00000495835 IRS4O14654 1257 aaPredicted RBP31.13■■■□□ 2.57
HLA-C-209ENST00000495835 TCERG1O14776 1098 aaKnown RBP31.13■■■□□ 2.57
HLA-C-209ENST00000495835 FAM9BQ8IZU0 186 aa31.13■■■□□ 2.57
HLA-C-209ENST00000495835 GPC2Q8N158 579 aa31.13■■■□□ 2.57
HLA-C-209ENST00000495835 PCCAP05165 728 aaPredicted RBP31.12■■■□□ 2.57
HLA-C-209ENST00000495835 LARGE2Q8N3Y3 721 aa31.12■■■□□ 2.57
HLA-C-209ENST00000495835 CWC25Q9NXE8 425 aaPredicted RBP31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms