RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 SIK1P57059 783 aa13.38□□□□□ -0.27
ECHDC3-204ENST00000495787 CWF19L2Q2TBE0 894 aaKnown RBP13.38□□□□□ -0.27
ECHDC3-204ENST00000495787 TTLL7Q6ZT98 887 aa13.38□□□□□ -0.27
ECHDC3-204ENST00000495787 AK7Q96M32 723 aa13.38□□□□□ -0.27
ECHDC3-204ENST00000495787 GRM8O00222 908 aa13.37□□□□□ -0.27
ECHDC3-204ENST00000495787 NBPF7P0C2Y1 421 aaPredicted RBP13.37□□□□□ -0.27
ECHDC3-204ENST00000495787 ATP6V1AP38606 617 aa13.37□□□□□ -0.27
ECHDC3-204ENST00000495787 TAF1LQ8IZX4 1826 aa13.36□□□□□ -0.27
ECHDC3-204ENST00000495787 C4BP0C0L5 1744 aa13.36□□□□□ -0.27
ECHDC3-204ENST00000495787 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
ECHDC3-204ENST00000495787 IL6STP40189 918 aaPredicted RBP13.36□□□□□ -0.27
ECHDC3-204ENST00000495787 GCKRQ14397 625 aa13.36□□□□□ -0.27
ECHDC3-204ENST00000495787 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
ECHDC3-204ENST00000495787 CHD1LQ86WJ1 897 aa13.36□□□□□ -0.27
ECHDC3-204ENST00000495787 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.35□□□□□ -0.27
ECHDC3-204ENST00000495787 KIF6Q6ZMV9 814 aa13.35□□□□□ -0.27
ECHDC3-204ENST00000495787 SSH3Q8TE77 659 aa13.35□□□□□ -0.27
ECHDC3-204ENST00000495787 CCDC87Q9NVE4 849 aa13.35□□□□□ -0.27
ECHDC3-204ENST00000495787 WWC3Q9ULE0 1092 aa13.35□□□□□ -0.27
ECHDC3-204ENST00000495787 PNMA6EA0A0J9YXQ4 647 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 PHF14O94880 888 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 PDE4AP27815 886 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 MTX1Q13505 466 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 ITPK1Q13572 414 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 POLA2Q14181 598 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 ZBTB3Q9H5J0 574 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 ZBTB1Q9Y2K1 713 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 ANKRD36CQ5JPF3 1778 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 MAP3K15Q6ZN16 1313 aa13.34□□□□□ -0.27
ECHDC3-204ENST00000495787 COL15A1P39059 1388 aa13.33□□□□□ -0.27
ECHDC3-204ENST00000495787 TOMM70O94826 608 aa13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 SSFA2P28290 1259 aa13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 CRKLP46109 303 aaKnown RBP13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 TCIRG1Q13488 830 aa13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 INTS5Q6P9B9 1019 aaKnown RBP13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 PPP1R42Q7Z4L9 355 aa13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 AMIGO3Q86WK7 504 aa13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 CCDC191Q8NCU4 936 aa13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 LNPKQ9C0E8 428 aa13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 ZNF330Q9Y3S2 320 aaPredicted RBP13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 NUP98P52948 1817 aa13.33□□□□□ -0.28
ECHDC3-204ENST00000495787 UBR3Q6ZT12 1888 aa13.32□□□□□ -0.28
ECHDC3-204ENST00000495787 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
ECHDC3-204ENST00000495787 EIF5P55010 431 aaKnown RBP13.32□□□□□ -0.28
ECHDC3-204ENST00000495787 TRIM28Q13263 835 aaKnown RBP13.32□□□□□ -0.28
ECHDC3-204ENST00000495787 HSP90AB3PQ58FF7 597 aa13.32□□□□□ -0.28
ECHDC3-204ENST00000495787 NPM2Q86SE8 214 aaKnown RBP13.32□□□□□ -0.28
ECHDC3-204ENST00000495787 SUCLG2Q96I99 432 aa13.32□□□□□ -0.28
ECHDC3-204ENST00000495787 ISCA1Q9BUE6 129 aa13.32□□□□□ -0.28
ECHDC3-204ENST00000495787 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
ECHDC3-204ENST00000495787 A0A087WZG4 1122 aa13.31□□□□□ -0.28
ECHDC3-204ENST00000495787 ERVV-1B6SEH8 477 aa13.31□□□□□ -0.28
ECHDC3-204ENST00000495787 H7C1W4 665 aa13.31□□□□□ -0.28
ECHDC3-204ENST00000495787 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
ECHDC3-204ENST00000495787 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
ECHDC3-204ENST00000495787 DNAJC5GQ8N7S2 189 aa13.31□□□□□ -0.28
ECHDC3-204ENST00000495787 BACH2Q9BYV9 841 aa13.31□□□□□ -0.28
ECHDC3-204ENST00000495787 RAB11FIP3O75154 756 aa13.3□□□□□ -0.28
ECHDC3-204ENST00000495787 CASP7P55210 303 aa13.3□□□□□ -0.28
ECHDC3-204ENST00000495787 FAM161AQ3B820 660 aa13.3□□□□□ -0.28
ECHDC3-204ENST00000495787 SMIM5Q71RC9 77 aa13.3□□□□□ -0.28
ECHDC3-204ENST00000495787 DZIP3Q86Y13 1208 aaKnown RBP13.3□□□□□ -0.28
ECHDC3-204ENST00000495787 KAZALD1Q96I82 304 aa13.3□□□□□ -0.28
ECHDC3-204ENST00000495787 CNTNAP4Q9C0A0 1308 aa13.3□□□□□ -0.28
ECHDC3-204ENST00000495787 HSP90AB4PQ58FF6 505 aa13.29□□□□□ -0.28
ECHDC3-204ENST00000495787 RC3H1Q5TC82 1133 aaKnown RBP13.29□□□□□ -0.28
ECHDC3-204ENST00000495787 UBE3BQ7Z3V4 1068 aa13.29□□□□□ -0.28
ECHDC3-204ENST00000495787 LINC00116Q8NCU8 138 aa13.29□□□□□ -0.28
ECHDC3-204ENST00000495787 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
ECHDC3-204ENST00000495787 EXOC6BQ9Y2D4 811 aa13.29□□□□□ -0.28
ECHDC3-204ENST00000495787 NOP58Q9Y2X3 529 aaKnown RBP13.29□□□□□ -0.28
ECHDC3-204ENST00000495787 GNPATO15228 680 aa13.28□□□□□ -0.28
ECHDC3-204ENST00000495787 MMP10P09238 476 aa13.28□□□□□ -0.28
ECHDC3-204ENST00000495787 TGFB2P61812 414 aa13.28□□□□□ -0.28
ECHDC3-204ENST00000495787 HLFQ16534 295 aa13.28□□□□□ -0.28
ECHDC3-204ENST00000495787 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
ECHDC3-204ENST00000495787 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
ECHDC3-204ENST00000495787 BCORQ6W2J9 1755 aa13.27□□□□□ -0.28
ECHDC3-204ENST00000495787 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.29
ECHDC3-204ENST00000495787 RABL6Q3YEC7 729 aaPredicted RBP13.27□□□□□ -0.29
ECHDC3-204ENST00000495787 C8orf34Q49A92 452 aa13.27□□□□□ -0.29
ECHDC3-204ENST00000495787 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
ECHDC3-204ENST00000495787 TBC1D2BQ9UPU7 963 aa13.27□□□□□ -0.29
ECHDC3-204ENST00000495787 BCS1LQ9Y276 419 aa13.27□□□□□ -0.29
ECHDC3-204ENST00000495787 APBB1O00213 710 aa13.26□□□□□ -0.29
ECHDC3-204ENST00000495787 SMARCA5O60264 1052 aaPredicted RBP13.26□□□□□ -0.29
ECHDC3-204ENST00000495787 PCCAP05165 728 aaPredicted RBP13.26□□□□□ -0.29
ECHDC3-204ENST00000495787 PLEKHM2Q8IWE5 1019 aa13.26□□□□□ -0.29
ECHDC3-204ENST00000495787 RBM46Q8TBY0 533 aaKnown RBP13.26□□□□□ -0.29
ECHDC3-204ENST00000495787 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
ECHDC3-204ENST00000495787 NMRK2Q9NPI5 230 aa13.26□□□□□ -0.29
ECHDC3-204ENST00000495787 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 RGL2O15211 777 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 CAMTA2O94983 1202 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 NLRP10Q86W26 655 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 ERC1Q8IUD2 1116 aa13.25□□□□□ -0.29
ECHDC3-204ENST00000495787 C16orf71Q8IYS4 520 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms