RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 TTC24A2A3L6 582 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP3-211ENST00000495663 CSB-PGBD3P0DP91 1061 aa13.58□□□□□ -0.24
RAB11FIP3-211ENST00000495663 FDX1P10109 184 aa13.58□□□□□ -0.24
RAB11FIP3-211ENST00000495663 DIEXFQ68CQ4 756 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP3-211ENST00000495663 ANKRD24Q8TF21 1146 aa13.58□□□□□ -0.24
RAB11FIP3-211ENST00000495663 PCDHGC3Q9UN70 934 aa13.58□□□□□ -0.24
RAB11FIP3-211ENST00000495663 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.24
RAB11FIP3-211ENST00000495663 CRB1P82279 1406 aa13.57□□□□□ -0.24
RAB11FIP3-211ENST00000495663 JUNDP17535 347 aa13.57□□□□□ -0.24
RAB11FIP3-211ENST00000495663 ZNF775Q96BV0 537 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP3-211ENST00000495663 LTV1Q96GA3 475 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP3-211ENST00000495663 CFAP53Q96M91 514 aa13.57□□□□□ -0.24
RAB11FIP3-211ENST00000495663 TRPC5Q9UL62 973 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP3-211ENST00000495663 ATRNO75882 1429 aa13.56□□□□□ -0.24
RAB11FIP3-211ENST00000495663 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
RAB11FIP3-211ENST00000495663 NDUFV2P19404 249 aa13.56□□□□□ -0.24
RAB11FIP3-211ENST00000495663 VPS72Q15906 364 aa13.56□□□□□ -0.24
RAB11FIP3-211ENST00000495663 LARP1Q6PKG0 1096 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-211ENST00000495663 GIGYF2Q6Y7W6 1299 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-211ENST00000495663 TOM1L2Q6ZVM7 507 aa13.56□□□□□ -0.24
RAB11FIP3-211ENST00000495663 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-211ENST00000495663 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP3-211ENST00000495663 WNK3Q9BYP7 1800 aa13.55□□□□□ -0.24
RAB11FIP3-211ENST00000495663 WNT7AO00755 349 aa13.55□□□□□ -0.24
RAB11FIP3-211ENST00000495663 AMHR2Q16671 573 aa13.55□□□□□ -0.24
RAB11FIP3-211ENST00000495663 RETREG3Q86VR2 466 aa13.55□□□□□ -0.24
RAB11FIP3-211ENST00000495663 SPIRE2Q8WWL2 714 aa13.55□□□□□ -0.24
RAB11FIP3-211ENST00000495663 MRGPRX2Q96LB1 330 aa13.55□□□□□ -0.24
RAB11FIP3-211ENST00000495663 QTRT2Q9H974 415 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP3-211ENST00000495663 DACH1Q9UI36 760 aa13.55□□□□□ -0.24
RAB11FIP3-211ENST00000495663 RGPD1P0DJD0 1748 aa13.54□□□□□ -0.24
RAB11FIP3-211ENST00000495663 EIF4A2Q14240 407 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-211ENST00000495663 RGS17Q9UGC6 210 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP3-211ENST00000495663 GLI3P10071 1580 aa13.54□□□□□ -0.24
RAB11FIP3-211ENST00000495663 DIAPH1O60610 1272 aaKnown RBP13.53□□□□□ -0.24
RAB11FIP3-211ENST00000495663 GJD4Q96KN9 370 aaPredicted RBP13.53□□□□□ -0.24
RAB11FIP3-211ENST00000495663 CARD10Q9BWT7 1032 aa13.53□□□□□ -0.24
RAB11FIP3-211ENST00000495663 NLRP2Q9NX02 1062 aa13.53□□□□□ -0.24
RAB11FIP3-211ENST00000495663 SPATA31A1Q5TZJ5 1347 aa13.53□□□□□ -0.24
RAB11FIP3-211ENST00000495663 SPATA31A5Q5VU36 1347 aa13.53□□□□□ -0.24
RAB11FIP3-211ENST00000495663 SPATA31A7Q8IWB4 1347 aa13.53□□□□□ -0.24
RAB11FIP3-211ENST00000495663 MOXD2PA6NHM9 499 aa13.52□□□□□ -0.25
RAB11FIP3-211ENST00000495663 IL13P35225 146 aa13.52□□□□□ -0.25
RAB11FIP3-211ENST00000495663 USP35Q9P2H5 1018 aa13.52□□□□□ -0.25
RAB11FIP3-211ENST00000495663 PARP4Q9UKK3 1724 aaKnown RBP13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 AVPP01185 164 aa13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 RBM6P78332 1123 aaKnown RBP13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 SKOR1P84550 965 aa13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 TCP11L2Q8N4U5 519 aa13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 NUDT12Q9BQG2 462 aa13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 NUDCQ9Y266 331 aa13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 THRAP3Q9Y2W1 955 aaKnown RBP13.51□□□□□ -0.25
RAB11FIP3-211ENST00000495663 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
RAB11FIP3-211ENST00000495663 J3QL48 77 aa13.5□□□□□ -0.25
RAB11FIP3-211ENST00000495663 AXIN1O15169 862 aa13.5□□□□□ -0.25
RAB11FIP3-211ENST00000495663 SMPD1P17405 629 aa13.5□□□□□ -0.25
RAB11FIP3-211ENST00000495663 POTEAQ6S8J7 498 aa13.5□□□□□ -0.25
RAB11FIP3-211ENST00000495663 SNIP1Q8TAD8 396 aaKnown RBP13.5□□□□□ -0.25
RAB11FIP3-211ENST00000495663 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
RAB11FIP3-211ENST00000495663 RXRBP28702 533 aa13.49□□□□□ -0.25
RAB11FIP3-211ENST00000495663 RC3H1Q5TC82 1133 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP3-211ENST00000495663 PTCRAQ6ISU1 281 aaPredicted RBP13.49□□□□□ -0.25
RAB11FIP3-211ENST00000495663 CRIPAKQ8N1N5 446 aa13.49□□□□□ -0.25
RAB11FIP3-211ENST00000495663 BEGAINQ9BUH8 593 aa13.49□□□□□ -0.25
RAB11FIP3-211ENST00000495663 THSD7AQ9UPZ6 1657 aa13.49□□□□□ -0.25
RAB11FIP3-211ENST00000495663 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-211ENST00000495663 PARP9Q8IXQ6 854 aa13.48□□□□□ -0.25
RAB11FIP3-211ENST00000495663 USHBP1Q8N6Y0 703 aa13.48□□□□□ -0.25
RAB11FIP3-211ENST00000495663 CDCA7Q9BWT1 371 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP3-211ENST00000495663 LRRC37A3O60309 1634 aa13.46□□□□□ -0.25
RAB11FIP3-211ENST00000495663 MS4A1P11836 297 aa13.46□□□□□ -0.25
RAB11FIP3-211ENST00000495663 IL2RBP14784 551 aa13.46□□□□□ -0.25
RAB11FIP3-211ENST00000495663 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
RAB11FIP3-211ENST00000495663 RAPGEF4Q8WZA2 1011 aa13.46□□□□□ -0.25
RAB11FIP3-211ENST00000495663 MRS2Q9HD23 443 aa13.46□□□□□ -0.25
RAB11FIP3-211ENST00000495663 DISP2A7MBM2 1401 aa13.46□□□□□ -0.26
RAB11FIP3-211ENST00000495663 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.26
RAB11FIP3-211ENST00000495663 KDRP35968 1356 aa13.45□□□□□ -0.26
RAB11FIP3-211ENST00000495663 TRIM66O15016 1216 aa13.45□□□□□ -0.26
RAB11FIP3-211ENST00000495663 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
RAB11FIP3-211ENST00000495663 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.262e-6■□□□□ 9
RAB11FIP3-211ENST00000495663 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 MEGF6O75095 1541 aa13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 HMOX1P09601 288 aa13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 TATP17735 454 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 WNT7BP56706 349 aa13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 CTC1Q2NKJ3 1217 aa13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 TBC1D2Q9BYX2 928 aa13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 GMPR2Q9P2T1 348 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 PLEKHG2Q9H7P9 1386 aa13.44□□□□□ -0.26
RAB11FIP3-211ENST00000495663 OVOS2A0A0G2JMS6 1433 aa13.43□□□□□ -0.26
RAB11FIP3-211ENST00000495663 CCER2I3L3R5 266 aa13.43□□□□□ -0.26
RAB11FIP3-211ENST00000495663 RGS12O14924 1447 aa13.43□□□□□ -0.26
RAB11FIP3-211ENST00000495663 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
RAB11FIP3-211ENST00000495663 PRR7Q8TB68 274 aa13.43□□□□□ -0.26
RAB11FIP3-211ENST00000495663 SHANK3Q9BYB0 1731 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms