RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 MEIOBQ8N635 442 aa5.05□□□□□ -1.6
COPS3-211ENST00000495640 SLC43A3Q8NBI5 491 aa5.05□□□□□ -1.6
COPS3-211ENST00000495640 NLRP3Q96P20 1036 aa5.05□□□□□ -1.6
COPS3-211ENST00000495640 STK17AQ9UEE5 414 aa5.05□□□□□ -1.6
COPS3-211ENST00000495640 J3QL48 77 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 MICAL2O94851 1124 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 SNRPBP14678 240 aaKnown RBP5.04□□□□□ -1.6
COPS3-211ENST00000495640 RNF144AP50876 292 aaPredicted RBP5.04□□□□□ -1.6
COPS3-211ENST00000495640 WDR4P57081 412 aaKnown RBP5.04□□□□□ -1.6
COPS3-211ENST00000495640 RELBQ01201 579 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 IER5Q5VY09 327 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 XKR5Q6UX68 686 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 SNIP1Q8TAD8 396 aaKnown RBP5.04□□□□□ -1.6
COPS3-211ENST00000495640 FRMD6Q96NE9 622 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 GMLQ99445 158 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 ACBD3Q9H3P7 528 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 ZNF395Q9H8N7 513 aaPredicted RBP5.04□□□□□ -1.6
COPS3-211ENST00000495640 ZDHHC3Q9NYG2 299 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 WASF2Q9Y6W5 498 aa5.04□□□□□ -1.6
COPS3-211ENST00000495640 SPATA31C2B4DYI2 1134 aa5.03□□□□□ -1.6
COPS3-211ENST00000495640 GRNP28799 593 aaKnown RBP5.03□□□□□ -1.6
COPS3-211ENST00000495640 PLA2G4AP47712 749 aa5.03□□□□□ -1.6
COPS3-211ENST00000495640 TNNI2P48788 182 aa5.03□□□□□ -1.6
COPS3-211ENST00000495640 RACK1P63244 317 aaKnown RBP5.03□□□□□ -1.6
COPS3-211ENST00000495640 PTPN12Q05209 780 aaKnown RBP5.03□□□□□ -1.6
COPS3-211ENST00000495640 TRIP4Q15650 581 aaPredicted RBP5.03□□□□□ -1.6
COPS3-211ENST00000495640 USPL1Q5W0Q7 1092 aa5.03□□□□□ -1.6
COPS3-211ENST00000495640 TMEM214Q6NUQ4 689 aaKnown RBP5.03□□□□□ -1.6
COPS3-211ENST00000495640 PI16Q6UXB8 463 aa5.03□□□□□ -1.6
COPS3-211ENST00000495640 ZNF280CQ8ND82 737 aa5.03□□□□□ -1.6
COPS3-211ENST00000495640 SUSD3Q96L08 255 aa5.03□□□□□ -1.6
COPS3-211ENST00000495640 PUS7Q96PZ0 661 aaKnown RBP5.03□□□□□ -1.6
COPS3-211ENST00000495640 OSBPL7Q9BZF2 842 aa5.03□□□□□ -1.6
COPS3-211ENST00000495640 ATP13A2Q9NQ11 1180 aa5.03□□□□□ -1.6
COPS3-211ENST00000495640 DDX41Q9UJV9 622 aaKnown RBP5.03□□□□□ -1.6
COPS3-211ENST00000495640 CPNE3O75131 537 aaKnown RBP5.02□□□□□ -1.61
COPS3-211ENST00000495640 TNFRSF21O75509 655 aa5.02□□□□□ -1.61
COPS3-211ENST00000495640 RPLP1P05386 114 aaKnown RBP5.02□□□□□ -1.61
COPS3-211ENST00000495640 PCSK2P16519 638 aa5.02□□□□□ -1.61
COPS3-211ENST00000495640 ATP4AP20648 1035 aa5.02□□□□□ -1.61
COPS3-211ENST00000495640 LORP23490 312 aaPredicted RBP5.02□□□□□ -1.61
COPS3-211ENST00000495640 INPP5BP32019 993 aa5.02□□□□□ -1.61
COPS3-211ENST00000495640 C8orf34Q49A92 452 aa5.02□□□□□ -1.61
COPS3-211ENST00000495640 HSH2DQ96JZ2 352 aa5.02□□□□□ -1.61
COPS3-211ENST00000495640 TRIM47Q96LD4 638 aa5.02□□□□□ -1.61
COPS3-211ENST00000495640 SRA1Q9HD15 236 aaKnown RBP5.02□□□□□ -1.61
COPS3-211ENST00000495640 FOXD3Q9UJU5 478 aaPredicted RBP5.02□□□□□ -1.61
COPS3-211ENST00000495640 GPC6Q9Y625 555 aaPredicted RBP5.02□□□□□ -1.61
COPS3-211ENST00000495640 KCNMB2Q9Y691 235 aa5.02□□□□□ -1.61
COPS3-211ENST00000495640 TERTO14746 1132 aaKnown RBP5.01□□□□□ -1.61
COPS3-211ENST00000495640 SPINT1O43278 529 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 IRS1P35568 1242 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 IDH3AP50213 366 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 HIF1AQ16665 826 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.01□□□□□ -1.61
COPS3-211ENST00000495640 ZNF394Q53GI3 561 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 RHPN1Q8TCX5 695 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 INSM2Q96T92 566 aaPredicted RBP5.01□□□□□ -1.61
COPS3-211ENST00000495640 TANGO6Q9C0B7 1094 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 C12orf49Q9H741 205 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 CCSER2Q9H7U1 834 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 NLRP2Q9NX02 1062 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 FAM13BQ9NYF5 915 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 PPP1R1BQ9UD71 204 aaPredicted RBP5.01□□□□□ -1.61
COPS3-211ENST00000495640 PRKAG2Q9UGJ0 569 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 SPG7Q9UQ90 795 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.01□□□□□ -1.61
COPS3-211ENST00000495640 USP20Q9Y2K6 914 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 USP31Q70CQ4 1352 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 CADPSQ9ULU8 1353 aa5.01□□□□□ -1.61
COPS3-211ENST00000495640 NEFLP07196 543 aa5□□□□□ -1.61
COPS3-211ENST00000495640 EIF4BP23588 611 aaKnown RBP5□□□□□ -1.61
COPS3-211ENST00000495640 NBPF1Q3BBV0 1214 aa5□□□□□ -1.61
COPS3-211ENST00000495640 GNASQ5JWF2 1037 aa5□□□□□ -1.61
COPS3-211ENST00000495640 SLC27A3Q5K4L6 730 aa5□□□□□ -1.61
COPS3-211ENST00000495640 PDE12Q6L8Q7 609 aaKnown RBP5□□□□□ -1.61
COPS3-211ENST00000495640 EPS8L3Q8TE67 593 aaKnown RBP5□□□□□ -1.61
COPS3-211ENST00000495640 SNX29Q8TEQ0 813 aa5□□□□□ -1.61
COPS3-211ENST00000495640 CCDC74AQ96AQ1 378 aa5□□□□□ -1.61
COPS3-211ENST00000495640 SPATA32Q96LK8 384 aa5□□□□□ -1.61
COPS3-211ENST00000495640 CHRDQ9H2X0 955 aa5□□□□□ -1.61
COPS3-211ENST00000495640 CAPN10Q9HC96 672 aa5□□□□□ -1.61
COPS3-211ENST00000495640 PCDHGB7Q9Y5F8 929 aa5□□□□□ -1.61
COPS3-211ENST00000495640 TTC24A2A3L6 582 aaPredicted RBP4.99□□□□□ -1.61
COPS3-211ENST00000495640 GIPC1O14908 333 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 SMARCA5O60264 1052 aaPredicted RBP4.99□□□□□ -1.61
COPS3-211ENST00000495640 CTSOP43234 321 aaPredicted RBP4.99□□□□□ -1.61
COPS3-211ENST00000495640 PHKA2P46019 1235 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 ARSDP51689 593 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 INSM1Q01101 510 aaPredicted RBP4.99□□□□□ -1.61
COPS3-211ENST00000495640 MEI1Q5TIA1 1274 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 GIMAP6Q6P9H5 292 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 DPH6Q7L8W6 267 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 BTLAQ7Z6A9 289 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 HPS1Q92902 700 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 ARMC5Q96C12 935 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 ZIC5Q96T25 663 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 TSEN34Q9BSV6 310 aaKnown RBP4.99□□□□□ -1.61
COPS3-211ENST00000495640 ZFYVE28Q9HCC9 887 aa4.99□□□□□ -1.61
COPS3-211ENST00000495640 TMEM63CQ9P1W3 806 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms