RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 ZPR1O75312 459 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 RLBP1P12271 317 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 RFC4P35249 363 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 AAMPQ13685 434 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 MVPQ14764 893 aaKnown RBP18.47■□□□□ 0.55
PTPRE-211ENST00000495530 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 TMEM57Q8N5G2 664 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 ZNF652Q9Y2D9 606 aa18.47■□□□□ 0.55
PTPRE-211ENST00000495530 MYH14Q7Z406 1995 aaKnown RBP18.47■□□□□ 0.55
PTPRE-211ENST00000495530 C4BP0C0L5 1744 aa18.46■□□□□ 0.55
PTPRE-211ENST00000495530 UBR3Q6ZT12 1888 aa18.46■□□□□ 0.55
PTPRE-211ENST00000495530 N4BP2Q86UW6 1770 aaPredicted RBP18.46■□□□□ 0.55
PTPRE-211ENST00000495530 ALDH1L1O75891 902 aa18.46■□□□□ 0.55
PTPRE-211ENST00000495530 CLEC4GQ6UXB4 293 aa18.46■□□□□ 0.55
PTPRE-211ENST00000495530 GIGYF2Q6Y7W6 1299 aaKnown RBP18.46■□□□□ 0.55
PTPRE-211ENST00000495530 LINS1Q8NG48 757 aa18.46■□□□□ 0.55
PTPRE-211ENST00000495530 ARHGEF1Q92888 912 aaKnown RBP18.46■□□□□ 0.55
PTPRE-211ENST00000495530 ZBTB3Q9H5J0 574 aa18.46■□□□□ 0.55
PTPRE-211ENST00000495530 NARFQ9UHQ1 456 aa18.46■□□□□ 0.55
PTPRE-211ENST00000495530 COG6Q9Y2V7 657 aa18.46■□□□□ 0.55
PTPRE-211ENST00000495530 IRX6P78412 446 aaPredicted RBP18.45■□□□□ 0.54
PTPRE-211ENST00000495530 TCIRG1Q13488 830 aa18.45■□□□□ 0.54
PTPRE-211ENST00000495530 BEND3Q5T5X7 828 aa18.45■□□□□ 0.54
PTPRE-211ENST00000495530 KIAA1551Q9HCM1 1747 aa18.45■□□□□ 0.54
PTPRE-211ENST00000495530 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
PTPRE-211ENST00000495530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.44■□□□□ 0.54
PTPRE-211ENST00000495530 FKBP8Q14318 412 aa18.44■□□□□ 0.54
PTPRE-211ENST00000495530 SMC1BQ8NDV3 1235 aa18.44■□□□□ 0.54
PTPRE-211ENST00000495530 MYD88Q99836 296 aa18.44■□□□□ 0.54
PTPRE-211ENST00000495530 PXDNLA1KZ92 1463 aa18.44■□□□□ 0.54
PTPRE-211ENST00000495530 PHF14O94880 888 aa18.43■□□□□ 0.54
PTPRE-211ENST00000495530 CAMTA2O94983 1202 aa18.43■□□□□ 0.54
PTPRE-211ENST00000495530 TRIM28Q13263 835 aaKnown RBP18.43■□□□□ 0.54
PTPRE-211ENST00000495530 CRBNQ96SW2 442 aa18.43■□□□□ 0.54
PTPRE-211ENST00000495530 HDAC5Q9UQL6 1122 aa18.43■□□□□ 0.54
PTPRE-211ENST00000495530 BRCA1P38398 1863 aaKnown RBP18.43■□□□□ 0.54
PTPRE-211ENST00000495530 ARFGEF1Q9Y6D6 1849 aa18.42■□□□□ 0.54
PTPRE-211ENST00000495530 ARHGAP27Q6ZUM4 889 aa18.42■□□□□ 0.54
PTPRE-211ENST00000495530 CCDC191Q8NCU4 936 aa18.42■□□□□ 0.54
PTPRE-211ENST00000495530 ZBTB7BO15156 539 aaPredicted RBP18.41■□□□□ 0.54
PTPRE-211ENST00000495530 GNAI3P08754 354 aa18.41■□□□□ 0.54
PTPRE-211ENST00000495530 BCS1LQ9Y276 419 aa18.41■□□□□ 0.54
PTPRE-211ENST00000495530 IBTKQ9P2D0 1353 aaPredicted RBP18.41■□□□□ 0.54
PTPRE-211ENST00000495530 NEURL1BA8MQ27 555 aa18.4■□□□□ 0.54
PTPRE-211ENST00000495530 HLFQ16534 295 aa18.4■□□□□ 0.54
PTPRE-211ENST00000495530 EXOC6Q8TAG9 804 aa18.4■□□□□ 0.54
PTPRE-211ENST00000495530 ISCA1Q9BUE6 129 aa18.4■□□□□ 0.54
PTPRE-211ENST00000495530 C9orf78Q9NZ63 289 aaPredicted RBP18.4■□□□□ 0.54
PTPRE-211ENST00000495530 ATP5J2-PTCD1G3V325 749 aa18.39■□□□□ 0.53
PTPRE-211ENST00000495530 IGKV5-2P06315 115 aa18.39■□□□□ 0.53
PTPRE-211ENST00000495530 GCKRQ14397 625 aa18.39■□□□□ 0.53
PTPRE-211ENST00000495530 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
PTPRE-211ENST00000495530 CWC25Q9NXE8 425 aaPredicted RBP18.39■□□□□ 0.53
PTPRE-211ENST00000495530 USP42Q9H9J4 1324 aaKnown RBP18.39■□□□□ 0.53
PTPRE-211ENST00000495530 TGFB2P61812 414 aa18.38■□□□□ 0.53
PTPRE-211ENST00000495530 CWF19L2Q2TBE0 894 aaKnown RBP18.38■□□□□ 0.53
PTPRE-211ENST00000495530 PARP10Q53GL7 1025 aa18.38■□□□□ 0.53
PTPRE-211ENST00000495530 C9orf131Q5VYM1 1079 aa18.38■□□□□ 0.53
PTPRE-211ENST00000495530 SMIM5Q71RC9 77 aa18.38■□□□□ 0.53
PTPRE-211ENST00000495530 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
PTPRE-211ENST00000495530 ZNF34Q8IZ26 560 aa18.38■□□□□ 0.53
PTPRE-211ENST00000495530 FAM161AQ3B820 660 aa18.37■□□□□ 0.53
PTPRE-211ENST00000495530 USP44Q9H0E7 712 aa18.37■□□□□ 0.53
PTPRE-211ENST00000495530 RRAGCQ9HB90 399 aa18.37■□□□□ 0.53
PTPRE-211ENST00000495530 ZBTB40Q9NUA8 1239 aa18.37■□□□□ 0.53
PTPRE-211ENST00000495530 SBF1O95248 1867 aa18.37■□□□□ 0.53
PTPRE-211ENST00000495530 GRM8O00222 908 aa18.36■□□□□ 0.53
PTPRE-211ENST00000495530 UBTFL1P0CB47 393 aaPredicted RBP18.36■□□□□ 0.53
PTPRE-211ENST00000495530 PPP1R42Q7Z4L9 355 aa18.36■□□□□ 0.53
PTPRE-211ENST00000495530 NLGN1Q8N2Q7 840 aa18.36■□□□□ 0.53
PTPRE-211ENST00000495530 SETDB2Q96T68 719 aa18.36■□□□□ 0.53
PTPRE-211ENST00000495530 SRP68Q9UHB9 627 aaKnown RBP18.36■□□□□ 0.53
PTPRE-211ENST00000495530 NIP7Q9Y221 180 aaKnown RBP eCLIP18.36■□□□□ 0.53
PTPRE-211ENST00000495530 GPTP24298 496 aa18.35■□□□□ 0.53
PTPRE-211ENST00000495530 NLRP10Q86W26 655 aa18.35■□□□□ 0.53
PTPRE-211ENST00000495530 ARFGEF2Q9Y6D5 1785 aa18.35■□□□□ 0.53
PTPRE-211ENST00000495530 UTYO14607 1347 aa18.34■□□□□ 0.53
PTPRE-211ENST00000495530 GNAI2P04899 355 aa18.34■□□□□ 0.53
PTPRE-211ENST00000495530 GYS1P13807 737 aa18.34■□□□□ 0.53
PTPRE-211ENST00000495530 HSP90B1P14625 803 aaKnown RBP18.34■□□□□ 0.53
PTPRE-211ENST00000495530 MEIS3Q99687 375 aa18.34■□□□□ 0.53
PTPRE-211ENST00000495530 BCL2L12Q9HB09 334 aa18.34■□□□□ 0.53
PTPRE-211ENST00000495530 PRDM10Q9NQV6 1147 aa18.34■□□□□ 0.53
PTPRE-211ENST00000495530 H7C1W4 665 aa18.33■□□□□ 0.52
PTPRE-211ENST00000495530 ZBTB38Q8NAP3 1195 aaPredicted RBP18.33■□□□□ 0.52
PTPRE-211ENST00000495530 UTP14AQ9BVJ6 771 aaKnown RBP18.33■□□□□ 0.52
PTPRE-211ENST00000495530 TRMT112Q9UI30 125 aaKnown RBP18.33■□□□□ 0.52
PTPRE-211ENST00000495530 GTF3C3Q9Y5Q9 886 aa18.33■□□□□ 0.52
PTPRE-211ENST00000495530 PCCAP05165 728 aaPredicted RBP18.32■□□□□ 0.52
PTPRE-211ENST00000495530 NBPF7P0C2Y1 421 aaPredicted RBP18.32■□□□□ 0.52
PTPRE-211ENST00000495530 TBC1D9BQ66K14 1250 aa18.32■□□□□ 0.52
PTPRE-211ENST00000495530 NYXQ9GZU5 481 aa18.32■□□□□ 0.52
PTPRE-211ENST00000495530 NUP98P52948 1817 aa18.32■□□□□ 0.52
PTPRE-211ENST00000495530 A0A0G2JLW4 131 aa18.31■□□□□ 0.52
PTPRE-211ENST00000495530 TPTE2Q6XPS3 522 aa18.31■□□□□ 0.52
PTPRE-211ENST00000495530 BICDL1Q6ZP65 573 aa18.31■□□□□ 0.52
PTPRE-211ENST00000495530 PPP4R2Q9NY27 417 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms