RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 SF3B2Q13435 895 aaKnown RBP21.82■■□□□ 1.08
PSMB4-206ENST00000495288 EPHA10Q5JZY3 1008 aa21.82■■□□□ 1.08
PSMB4-206ENST00000495288 USPL1Q5W0Q7 1092 aa21.82■■□□□ 1.08
PSMB4-206ENST00000495288 FAM89AQ96GI7 184 aa21.82■■□□□ 1.08
PSMB4-206ENST00000495288 NIP7Q9Y221 180 aaKnown RBP eCLIP21.82■■□□□ 1.08
PSMB4-206ENST00000495288 C4BP0C0L5 1744 aa21.82■■□□□ 1.08
PSMB4-206ENST00000495288 APBB1O00213 710 aa21.81■■□□□ 1.08
PSMB4-206ENST00000495288 PCCAP05165 728 aaPredicted RBP21.81■■□□□ 1.08
PSMB4-206ENST00000495288 RGS3P49796 1198 aa21.81■■□□□ 1.08
PSMB4-206ENST00000495288 AMIGO3Q86WK7 504 aa21.81■■□□□ 1.08
PSMB4-206ENST00000495288 BCL11AQ9H165 835 aa21.81■■□□□ 1.08
PSMB4-206ENST00000495288 ZBTB47Q9UFB7 747 aaPredicted RBP21.81■■□□□ 1.08
PSMB4-206ENST00000495288 TRMT112Q9UI30 125 aaKnown RBP21.81■■□□□ 1.08
PSMB4-206ENST00000495288 TAF1LQ8IZX4 1826 aa21.8■■□□□ 1.08
PSMB4-206ENST00000495288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.8■■□□□ 1.08
PSMB4-206ENST00000495288 POLA2Q14181 598 aa21.8■■□□□ 1.08
PSMB4-206ENST00000495288 CLEC4GQ6UXB4 293 aa21.8■■□□□ 1.08
PSMB4-206ENST00000495288 ZBTB38Q8NAP3 1195 aaPredicted RBP21.8■■□□□ 1.08
PSMB4-206ENST00000495288 SSH3Q8TE77 659 aa21.8■■□□□ 1.08
PSMB4-206ENST00000495288 NUCB1Q02818 461 aa21.79■■□□□ 1.08
PSMB4-206ENST00000495288 EN1Q05925 392 aaPredicted RBP21.79■■□□□ 1.08
PSMB4-206ENST00000495288 PARP10Q53GL7 1025 aa21.79■■□□□ 1.08
PSMB4-206ENST00000495288 SUSD4Q5VX71 490 aa21.79■■□□□ 1.08
PSMB4-206ENST00000495288 BICDL1Q6ZP65 573 aa21.79■■□□□ 1.08
PSMB4-206ENST00000495288 UBN2Q6ZU65 1347 aa21.79■■□□□ 1.08
PSMB4-206ENST00000495288 SURF6O75683 361 aaKnown RBP21.78■■□□□ 1.08
PSMB4-206ENST00000495288 ADRA2BP18089 450 aa21.78■■□□□ 1.08
PSMB4-206ENST00000495288 MTX1Q13505 466 aa21.78■■□□□ 1.08
PSMB4-206ENST00000495288 SYNE4Q8N205 404 aa21.78■■□□□ 1.08
PSMB4-206ENST00000495288 UTP14AQ9BVJ6 771 aaKnown RBP21.78■■□□□ 1.08
PSMB4-206ENST00000495288 TFCP2L1Q9NZI6 479 aa21.78■■□□□ 1.08
PSMB4-206ENST00000495288 EXOC6BQ9Y2D4 811 aa21.78■■□□□ 1.08
PSMB4-206ENST00000495288 CHMP3Q9Y3E7 222 aa21.78■■□□□ 1.08
PSMB4-206ENST00000495288 NUP98P52948 1817 aa21.78■■□□□ 1.08
PSMB4-206ENST00000495288 FOXO4P98177 505 aa21.77■■□□□ 1.08
PSMB4-206ENST00000495288 EZH2Q15910 746 aaKnown RBP21.77■■□□□ 1.08
PSMB4-206ENST00000495288 LMBR1LQ6UX01 489 aa21.77■■□□□ 1.08
PSMB4-206ENST00000495288 CHD1LQ86WJ1 897 aa21.77■■□□□ 1.08
PSMB4-206ENST00000495288 LNPKQ9C0E8 428 aa21.77■■□□□ 1.08
PSMB4-206ENST00000495288 BCL2L12Q9HB09 334 aa21.77■■□□□ 1.08
PSMB4-206ENST00000495288 TBC1D9BQ66K14 1250 aa21.76■■□□□ 1.07
PSMB4-206ENST00000495288 IRS4O14654 1257 aaPredicted RBP21.75■■□□□ 1.07
PSMB4-206ENST00000495288 RGL2O15211 777 aa21.75■■□□□ 1.07
PSMB4-206ENST00000495288 MSH5O43196 834 aa21.75■■□□□ 1.07
PSMB4-206ENST00000495288 SSFA2P28290 1259 aa21.75■■□□□ 1.07
PSMB4-206ENST00000495288 BAG6P46379 1132 aa21.75■■□□□ 1.07
PSMB4-206ENST00000495288 OS9Q13438 667 aaPredicted RBP21.75■■□□□ 1.07
PSMB4-206ENST00000495288 CAMKK2Q96RR4 588 aa21.75■■□□□ 1.07
PSMB4-206ENST00000495288 USP42Q9H9J4 1324 aaKnown RBP21.75■■□□□ 1.07
PSMB4-206ENST00000495288 TNS1Q9HBL0 1735 aaKnown RBP21.75■■□□□ 1.07
PSMB4-206ENST00000495288 SMARCA5O60264 1052 aaPredicted RBP21.74■■□□□ 1.07
PSMB4-206ENST00000495288 ZNF827Q17R98 1081 aa21.74■■□□□ 1.07
PSMB4-206ENST00000495288 AKT1S1Q96B36 256 aa21.74■■□□□ 1.07
PSMB4-206ENST00000495288 SETDB2Q96T68 719 aa21.74■■□□□ 1.07
PSMB4-206ENST00000495288 CDHR2Q9BYE9 1310 aa21.74■■□□□ 1.07
PSMB4-206ENST00000495288 RABL6Q3YEC7 729 aaPredicted RBP21.73■■□□□ 1.07
PSMB4-206ENST00000495288 PA2G4Q9UQ80 394 aaKnown RBP21.73■■□□□ 1.07
PSMB4-206ENST00000495288 ANKRD36CQ5JPF3 1778 aa21.73■■□□□ 1.07
PSMB4-206ENST00000495288 SH3TC1Q8TE82 1336 aa21.73■■□□□ 1.07
PSMB4-206ENST00000495288 RAB11FIP3O75154 756 aa21.72■■□□□ 1.07
PSMB4-206ENST00000495288 GTF2E1P29083 439 aaPredicted RBP21.72■■□□□ 1.07
PSMB4-206ENST00000495288 G3BP1Q13283 466 aaKnown RBP eCLIP21.72■■□□□ 1.075e-8■■■□□ 15.7
PSMB4-206ENST00000495288 HSP90AB4PQ58FF6 505 aa21.72■■□□□ 1.07
PSMB4-206ENST00000495288 HCLS1P14317 486 aaPredicted RBP21.71■■□□□ 1.07
PSMB4-206ENST00000495288 PDE4AP27815 886 aa21.71■■□□□ 1.07
PSMB4-206ENST00000495288 DEFB132Q7Z7B7 95 aa21.71■■□□□ 1.07
PSMB4-206ENST00000495288 CCDC85AQ96PX6 553 aaPredicted RBP21.71■■□□□ 1.07
PSMB4-206ENST00000495288 PLA2G12BQ9BX93 195 aa21.71■■□□□ 1.07
PSMB4-206ENST00000495288 LRRCC1Q9C099 1032 aa21.71■■□□□ 1.07
PSMB4-206ENST00000495288 PDE8AO60658 829 aa21.7■■□□□ 1.06
PSMB4-206ENST00000495288 NTSR2O95665 410 aa21.7■■□□□ 1.06
PSMB4-206ENST00000495288 NUTM1Q86Y26 1132 aa21.7■■□□□ 1.06
PSMB4-206ENST00000495288 KLHDC4Q8TBB5 520 aa21.7■■□□□ 1.06
PSMB4-206ENST00000495288 SIL1Q9H173 461 aa21.7■■□□□ 1.06
PSMB4-206ENST00000495288 NOP58Q9Y2X3 529 aaKnown RBP21.7■■□□□ 1.06
PSMB4-206ENST00000495288 BCORQ6W2J9 1755 aa21.69■■□□□ 1.06
PSMB4-206ENST00000495288 HSP90B1P14625 803 aaKnown RBP21.69■■□□□ 1.06
PSMB4-206ENST00000495288 NBPF5PQ86XG9 351 aaPredicted RBP21.69■■□□□ 1.06
PSMB4-206ENST00000495288 C16orf71Q8IYS4 520 aaPredicted RBP21.69■■□□□ 1.06
PSMB4-206ENST00000495288 FLAD1Q8NFF5 587 aa21.69■■□□□ 1.06
PSMB4-206ENST00000495288 STK32BQ9NY57 414 aa21.69■■□□□ 1.06
PSMB4-206ENST00000495288 RFX5P48382 616 aaPredicted RBP21.68■■□□□ 1.06
PSMB4-206ENST00000495288 ERFEQ4G0M1 354 aa21.68■■□□□ 1.06
PSMB4-206ENST00000495288 COL23A1Q86Y22 540 aaPredicted RBP21.68■■□□□ 1.06
PSMB4-206ENST00000495288 NYXQ9GZU5 481 aa21.68■■□□□ 1.06
PSMB4-206ENST00000495288 NPHP1O15259 732 aa21.67■■□□□ 1.06
PSMB4-206ENST00000495288 CSF1RP07333 972 aa21.67■■□□□ 1.06
PSMB4-206ENST00000495288 GYS1P13807 737 aa21.67■■□□□ 1.06
PSMB4-206ENST00000495288 CTSWP56202 376 aa21.67■■□□□ 1.06
PSMB4-206ENST00000495288 NFIXQ14938 502 aa21.67■■□□□ 1.06
PSMB4-206ENST00000495288 CCDC57Q2TAC2 916 aa21.67■■□□□ 1.06
PSMB4-206ENST00000495288 COPRSQ9NQ92 184 aa21.67■■□□□ 1.06
PSMB4-206ENST00000495288 UBR3Q6ZT12 1888 aa21.66■■□□□ 1.06
PSMB4-206ENST00000495288 SCN7AQ01118 1682 aa21.66■■□□□ 1.06
PSMB4-206ENST00000495288 PTPN12Q05209 780 aaKnown RBP21.66■■□□□ 1.06
PSMB4-206ENST00000495288 TAF7LQ5H9L4 462 aa21.66■■□□□ 1.06
PSMB4-206ENST00000495288 TPTE2Q6XPS3 522 aa21.66■■□□□ 1.06
PSMB4-206ENST00000495288 CCDC125Q86Z20 511 aa21.66■■□□□ 1.06
PSMB4-206ENST00000495288 ERC1Q8IUD2 1116 aa21.66■■□□□ 1.06
PSMB4-206ENST00000495288 TTLL11Q8NHH1 800 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms