RNA–Protein interactions for RNA: ENST00000495198.6

SREK1IP1-201, Transcript of SREK1 interacting protein 1, humanhuman

TSL 3

Gene SREK1IP1, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-201ENST00000495198 PRM3Q9NNZ6 103 aa11.03□□□□□ -0.64
SREK1IP1-201ENST00000495198 RHPN1Q8TCX5 695 aa11.02□□□□□ -0.65
SREK1IP1-201ENST00000495198 BRD7Q9NPI1 651 aa11.02□□□□□ -0.65
SREK1IP1-201ENST00000495198 ZNF232Q9UNY5 417 aa11.02□□□□□ -0.65
SREK1IP1-201ENST00000495198 NOD1Q9Y239 953 aa11.02□□□□□ -0.65
SREK1IP1-201ENST00000495198 SERTM1A2A2V5 107 aa11.01□□□□□ -0.65
SREK1IP1-201ENST00000495198 SOX11P35716 441 aa11.01□□□□□ -0.65
SREK1IP1-201ENST00000495198 LRP8Q14114 963 aa11.01□□□□□ -0.65
SREK1IP1-201ENST00000495198 DEPDC4Q8N2C3 294 aa11.01□□□□□ -0.65
SREK1IP1-201ENST00000495198 ALG2Q9H553 416 aa11.01□□□□□ -0.65
SREK1IP1-201ENST00000495198 ZBTB7BO15156 539 aaPredicted RBP11□□□□□ -0.65
SREK1IP1-201ENST00000495198 HYAL3O43820 417 aaPredicted RBP11□□□□□ -0.65
SREK1IP1-201ENST00000495198 TXNRD3Q86VQ6 643 aa11□□□□□ -0.65
SREK1IP1-201ENST00000495198 TSPAN10Q9H1Z9 355 aaPredicted RBP11□□□□□ -0.65
SREK1IP1-201ENST00000495198 NAGPAQ9UK23 515 aa11□□□□□ -0.65
SREK1IP1-201ENST00000495198 PSME1Q06323 249 aa10.99□□□□□ -0.65
SREK1IP1-201ENST00000495198 TRAPPC3LQ5T215 181 aa10.99□□□□□ -0.65
SREK1IP1-201ENST00000495198 C9orf172C9J069 976 aa10.98□□□□□ -0.65
SREK1IP1-201ENST00000495198 ELNP15502 786 aa10.98□□□□□ -0.65
SREK1IP1-201ENST00000495198 HIRAP54198 1017 aaPredicted RBP10.98□□□□□ -0.65
SREK1IP1-201ENST00000495198 MCM6Q14566 821 aa10.98□□□□□ -0.65
SREK1IP1-201ENST00000495198 LENG1Q96BZ8 264 aaPredicted RBP10.98□□□□□ -0.65
SREK1IP1-201ENST00000495198 CEP63Q96MT8 703 aa10.98□□□□□ -0.65
SREK1IP1-201ENST00000495198 HCN4Q9Y3Q4 1203 aa10.98□□□□□ -0.65
SREK1IP1-201ENST00000495198 C14orf37Q86TY3 774 aa10.97□□□□□ -0.65
SREK1IP1-201ENST00000495198 SUSD3Q96L08 255 aa10.97□□□□□ -0.65
SREK1IP1-201ENST00000495198 PHACTR1Q9C0D0 580 aa10.97□□□□□ -0.65
SREK1IP1-201ENST00000495198 SLC6A14Q9UN76 642 aa10.97□□□□□ -0.65
SREK1IP1-201ENST00000495198 KCNH4Q9UQ05 1017 aa10.97□□□□□ -0.65
SREK1IP1-201ENST00000495198 RIMBP3CA6NJZ7 1639 aa10.97□□□□□ -0.65
SREK1IP1-201ENST00000495198 RIMBP3BA6NNM3 1639 aa10.97□□□□□ -0.65
SREK1IP1-201ENST00000495198 RIMBP3Q9UFD9 1639 aa10.97□□□□□ -0.65
SREK1IP1-201ENST00000495198 SFI1A8K8P3 1242 aa10.96□□□□□ -0.65
SREK1IP1-201ENST00000495198 USP17L5A8MUK1 530 aa10.96□□□□□ -0.65
SREK1IP1-201ENST00000495198 LILRB5O75023 590 aa10.96□□□□□ -0.65
SREK1IP1-201ENST00000495198 NRG1Q02297 640 aaPredicted RBP10.96□□□□□ -0.65
SREK1IP1-201ENST00000495198 C1orf53Q5VUE5 145 aa10.96□□□□□ -0.65
SREK1IP1-201ENST00000495198 CYB5RLQ6IPT4 315 aa10.96□□□□□ -0.65
SREK1IP1-201ENST00000495198 NFATC2IPQ8NCF5 419 aa10.96□□□□□ -0.65
SREK1IP1-201ENST00000495198 BHMTQ93088 406 aa10.96□□□□□ -0.65
SREK1IP1-201ENST00000495198 URB2Q14146 1524 aaKnown RBP10.95□□□□□ -0.66
SREK1IP1-201ENST00000495198 CFTRP13569 1480 aa10.95□□□□□ -0.66
SREK1IP1-201ENST00000495198 CLDN10P78369 228 aa10.95□□□□□ -0.66
SREK1IP1-201ENST00000495198 NBPF11Q86T75 865 aa10.95□□□□□ -0.66
SREK1IP1-201ENST00000495198 NUDT8Q8WV74 236 aa10.95□□□□□ -0.66
SREK1IP1-201ENST00000495198 NEUROD4Q9HD90 331 aa10.95□□□□□ -0.66
SREK1IP1-201ENST00000495198 COG6Q9Y2V7 657 aa10.95□□□□□ -0.66
SREK1IP1-201ENST00000495198 AFF1P51825 1210 aaKnown RBP10.94□□□□□ -0.66
SREK1IP1-201ENST00000495198 PSMA6P60900 246 aaKnown RBP10.94□□□□□ -0.66
SREK1IP1-201ENST00000495198 C21orf2O43822 256 aa10.93□□□□□ -0.66
SREK1IP1-201ENST00000495198 FMR1NBQ8N0W7 255 aaPredicted RBP10.93□□□□□ -0.66
SREK1IP1-201ENST00000495198 TPCN2Q8NHX9 752 aa10.93□□□□□ -0.66
SREK1IP1-201ENST00000495198 TP53INP1Q96A56 240 aa10.93□□□□□ -0.66
SREK1IP1-201ENST00000495198 JPH1Q9HDC5 661 aaPredicted RBP10.93□□□□□ -0.66
SREK1IP1-201ENST00000495198 LZTS3O60299 673 aaPredicted RBP10.92□□□□□ -0.66
SREK1IP1-201ENST00000495198 DKK1O94907 266 aa10.92□□□□□ -0.66
SREK1IP1-201ENST00000495198 GRNP28799 593 aaKnown RBP10.92□□□□□ -0.66
SREK1IP1-201ENST00000495198 ADAMTS19Q8TE59 1207 aa10.92□□□□□ -0.66
SREK1IP1-201ENST00000495198 TBC1D8BQ0IIM8 1120 aa10.91□□□□□ -0.66
SREK1IP1-201ENST00000495198 UBE2OQ9C0C9 1292 aaKnown RBP10.91□□□□□ -0.66
SREK1IP1-201ENST00000495198 ARHGEF11O15085 1522 aa10.9□□□□□ -0.66
SREK1IP1-201ENST00000495198 PLAURQ03405 335 aa10.9□□□□□ -0.66
SREK1IP1-201ENST00000495198 NEUROD1Q13562 356 aa10.9□□□□□ -0.66
SREK1IP1-201ENST00000495198 DNAJB12Q9NXW2 375 aaKnown RBP10.9□□□□□ -0.66
SREK1IP1-201ENST00000495198 GRIK5Q16478 980 aa10.89□□□□□ -0.67
SREK1IP1-201ENST00000495198 PSAPL1Q6NUJ1 521 aa10.89□□□□□ -0.67
SREK1IP1-201ENST00000495198 BTLAQ7Z6A9 289 aa10.89□□□□□ -0.67
SREK1IP1-201ENST00000495198 DMRTC2Q8IXT2 367 aaPredicted RBP10.89□□□□□ -0.67
SREK1IP1-201ENST00000495198 IFT140Q96RY7 1462 aa10.88□□□□□ -0.67
SREK1IP1-201ENST00000495198 KRTAP4-8A0A0G2JLE6 195 aa10.88□□□□□ -0.67
SREK1IP1-201ENST00000495198 CCDC102BQ68D86 513 aa10.88□□□□□ -0.67
SREK1IP1-201ENST00000495198 UCN2Q96RP3 112 aa10.88□□□□□ -0.67
SREK1IP1-201ENST00000495198 IGFLR1Q9H665 355 aa10.88□□□□□ -0.67
SREK1IP1-201ENST00000495198 TOP2AP11388 1531 aaKnown RBP10.88□□□□□ -0.67
SREK1IP1-201ENST00000495198 ZNF608Q9ULD9 1512 aaPredicted RBP10.88□□□□□ -0.67
SREK1IP1-201ENST00000495198 RAC1P63000 192 aa10.87□□□□□ -0.67
SREK1IP1-201ENST00000495198 TSEN2Q8NCE0 465 aaKnown RBP10.87□□□□□ -0.67
SREK1IP1-201ENST00000495198 POM121Q96HA1 1249 aa10.87□□□□□ -0.67
SREK1IP1-201ENST00000495198 GSX2Q9BZM3 304 aa10.87□□□□□ -0.67
SREK1IP1-201ENST00000495198 ANKIB1Q9P2G1 1089 aa10.87□□□□□ -0.67
SREK1IP1-201ENST00000495198 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
SREK1IP1-201ENST00000495198 PRDM2Q13029 1718 aa10.85□□□□□ -0.67
SREK1IP1-201ENST00000495198 POM121CA8CG34 1229 aa10.85□□□□□ -0.67
SREK1IP1-201ENST00000495198 NOS3P29474 1203 aa10.85□□□□□ -0.67
SREK1IP1-201ENST00000495198 PLEKHM2Q8IWE5 1019 aa10.85□□□□□ -0.67
SREK1IP1-201ENST00000495198 ALDH16A1Q8IZ83 802 aa10.85□□□□□ -0.67
SREK1IP1-201ENST00000495198 BCS1LQ9Y276 419 aa10.85□□□□□ -0.67
SREK1IP1-201ENST00000495198 USP17L3A6NCW0 530 aa10.84□□□□□ -0.67
SREK1IP1-201ENST00000495198 USP17L4A6NCW7 530 aa10.84□□□□□ -0.67
SREK1IP1-201ENST00000495198 USP17L2Q6R6M4 530 aa10.84□□□□□ -0.67
SREK1IP1-201ENST00000495198 USP17L1Q7RTZ2 530 aa10.84□□□□□ -0.67
SREK1IP1-201ENST00000495198 MEGF10Q96KG7 1140 aa10.84□□□□□ -0.67
SREK1IP1-201ENST00000495198 DMGDHQ9UI17 866 aaKnown RBP10.84□□□□□ -0.67
SREK1IP1-201ENST00000495198 USP21Q9UK80 565 aa10.84□□□□□ -0.67
SREK1IP1-201ENST00000495198 M0R2N6 131 aa10.83□□□□□ -0.68
SREK1IP1-201ENST00000495198 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
SREK1IP1-201ENST00000495198 LPIN3Q9BQK8 851 aa10.83□□□□□ -0.68
SREK1IP1-201ENST00000495198 PPP1R12BO60237 982 aaPredicted RBP10.82□□□□□ -0.68
SREK1IP1-201ENST00000495198 NFKB1P19838 968 aa10.82□□□□□ -0.68
SREK1IP1-201ENST00000495198 TRIM50Q86XT4 487 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms