RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 FAM157BP0CG42 384 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 CD33P20138 364 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 ALAS2P22557 587 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 TMEM164Q5U3C3 297 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 MARK1Q9P0L2 795 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 KIAA1024Q9UPX6 916 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 DGKGP49619 791 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 SAMD5Q5TGI4 173 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 CHSY3Q70JA7 882 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 SIX5Q8N196 739 aa5.05□□□□□ -1.6
LRIF1-203ENST00000494675 COL17A1Q9UMD9 1497 aaPredicted RBP5.04□□□□□ -1.6
LRIF1-203ENST00000494675 SPDYE3A6NKU9 549 aa5.04□□□□□ -1.6
LRIF1-203ENST00000494675 M0R2N6 131 aa5.04□□□□□ -1.6
LRIF1-203ENST00000494675 SEC13P55735 322 aa5.04□□□□□ -1.6
LRIF1-203ENST00000494675 LRP8Q14114 963 aa5.04□□□□□ -1.6
LRIF1-203ENST00000494675 NKAPLQ5M9Q1 402 aa5.04□□□□□ -1.6
LRIF1-203ENST00000494675 TNS4Q8IZW8 715 aa5.04□□□□□ -1.6
LRIF1-203ENST00000494675 CCER1Q8TC90 406 aaPredicted RBP5.04□□□□□ -1.6
LRIF1-203ENST00000494675 IQSEC3Q9UPP2 1182 aaPredicted RBP5.04□□□□□ -1.6
LRIF1-203ENST00000494675 TMEM88BA6NKF7 163 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 TEAD4Q15561 434 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 SCHIP1Q9P0W5 487 aaPredicted RBP5.03□□□□□ -1.6
LRIF1-203ENST00000494675 CHMP3Q9Y3E7 222 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 GPC6Q9Y625 555 aaPredicted RBP5.03□□□□□ -1.6
LRIF1-203ENST00000494675 SFI1A8K8P3 1242 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 PCBP4P57723 403 aaKnown RBP5.03□□□□□ -1.6
LRIF1-203ENST00000494675 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 ZNF468Q5VIY5 522 aaPredicted RBP5.03□□□□□ -1.6
LRIF1-203ENST00000494675 AEBP1Q8IUX7 1158 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 SLC9A9Q8IVB4 645 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 HINFPQ9BQA5 517 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 ZNF232Q9UNY5 417 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 PARP3Q9Y6F1 533 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 USP3Q9Y6I4 520 aa5.03□□□□□ -1.6
LRIF1-203ENST00000494675 NOS2P35228 1153 aa5.02□□□□□ -1.61
LRIF1-203ENST00000494675 NEUROD1Q13562 356 aa5.02□□□□□ -1.61
LRIF1-203ENST00000494675 SWI5Q1ZZU3 235 aa5.02□□□□□ -1.61
LRIF1-203ENST00000494675 PRRT3Q5FWE3 981 aa5.02□□□□□ -1.61
LRIF1-203ENST00000494675 KLF15Q9UIH9 416 aa5.02□□□□□ -1.61
LRIF1-203ENST00000494675 ZBTB7CA1YPR0 619 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 DYRK3O43781 588 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 DKK1O94907 266 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 APBA3O96018 575 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 SPATA31C1P0DKV0 1188 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 EPHA4P54764 986 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 FCHSD1Q86WN1 690 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 ZNF295-AS1Q8N0V1 137 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 L3MBTL2Q969R5 705 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 PLVAPQ9BX97 442 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 ELOA3CA0A087WX78 387 aaPredicted RBP5.01□□□□□ -1.61
LRIF1-203ENST00000494675 SERTM1A2A2V5 107 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 ELOA3DA6NLF2 546 aaPredicted RBP5.01□□□□□ -1.61
LRIF1-203ENST00000494675 BRD1O95696 1058 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 TXLNAP40222 546 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 FAM69CQ0P6D2 419 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 ELOA3BQ3SY89 546 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 TBCELQ5QJ74 424 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 B4GALNT3Q6L9W6 998 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 LRRC69Q6ZNQ3 347 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 TSEN2Q8NCE0 465 aaKnown RBP5.01□□□□□ -1.61
LRIF1-203ENST00000494675 ELOA3Q8NG57 546 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 RHPN1Q8TCX5 695 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 ZDHHC1Q8WTX9 485 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 TPSG1Q9NRR2 321 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 ANKIB1Q9P2G1 1089 aa5.01□□□□□ -1.61
LRIF1-203ENST00000494675 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
LRIF1-203ENST00000494675 SYT9Q86SS6 491 aa5□□□□□ -1.61
LRIF1-203ENST00000494675 GAS2L2Q8NHY3 880 aa5□□□□□ -1.61
LRIF1-203ENST00000494675 CLP1Q92989 425 aaKnown RBP5□□□□□ -1.61
LRIF1-203ENST00000494675 ATAD2Q6PL18 1390 aa5□□□□□ -1.61
LRIF1-203ENST00000494675 EFSO43281 561 aa4.99□□□□□ -1.61
LRIF1-203ENST00000494675 PRMT3O60678 531 aa4.99□□□□□ -1.61
LRIF1-203ENST00000494675 SIN3BO75182 1162 aa4.99□□□□□ -1.61
LRIF1-203ENST00000494675 PSMA6P60900 246 aaKnown RBP4.99□□□□□ -1.61
LRIF1-203ENST00000494675 TRIM26Q12899 539 aaPredicted RBP4.99□□□□□ -1.61
LRIF1-203ENST00000494675 TSPAN10Q9H1Z9 355 aaPredicted RBP4.99□□□□□ -1.61
LRIF1-203ENST00000494675 STRN4Q9NRL3 753 aa4.99□□□□□ -1.61
LRIF1-203ENST00000494675 EML1O00423 815 aa4.99□□□□□ -1.61
LRIF1-203ENST00000494675 HYAL3O43820 417 aaPredicted RBP4.99□□□□□ -1.61
LRIF1-203ENST00000494675 PPP1R12BO60237 982 aaPredicted RBP4.99□□□□□ -1.61
LRIF1-203ENST00000494675 LGR5O75473 907 aa4.99□□□□□ -1.61
LRIF1-203ENST00000494675 ATP2B4P23634 1241 aa4.99□□□□□ -1.61
LRIF1-203ENST00000494675 PRSS36Q5K4E3 855 aa4.99□□□□□ -1.61
LRIF1-203ENST00000494675 C1orf53Q5VUE5 145 aa4.99□□□□□ -1.61
LRIF1-203ENST00000494675 PATL2C9JE40 543 aaKnown RBP4.98□□□□□ -1.61
LRIF1-203ENST00000494675 TRIM28Q13263 835 aaKnown RBP4.98□□□□□ -1.61
LRIF1-203ENST00000494675 TRIM11Q96F44 468 aa4.98□□□□□ -1.61
LRIF1-203ENST00000494675 PRIMPOLQ96LW4 560 aa4.98□□□□□ -1.61
LRIF1-203ENST00000494675 NACC1Q96RE7 527 aa4.98□□□□□ -1.61
LRIF1-203ENST00000494675 HCN4Q9Y3Q4 1203 aa4.98□□□□□ -1.61
LRIF1-203ENST00000494675 ADARB2-AS1A8MUL3 147 aa4.97□□□□□ -1.61
LRIF1-203ENST00000494675 SSFA2P28290 1259 aa4.97□□□□□ -1.61
LRIF1-203ENST00000494675 STAG2Q8N3U4 1231 aa4.97□□□□□ -1.61
LRIF1-203ENST00000494675 SCG3Q8WXD2 468 aaKnown RBP4.97□□□□□ -1.61
LRIF1-203ENST00000494675 CEP63Q96MT8 703 aa4.97□□□□□ -1.61
LRIF1-203ENST00000494675 JAG1P78504 1218 aa4.97□□□□□ -1.61
LRIF1-203ENST00000494675 KCNA1Q09470 495 aa4.97□□□□□ -1.61
LRIF1-203ENST00000494675 SFSWAPQ12872 951 aaKnown RBP4.97□□□□□ -1.61
LRIF1-203ENST00000494675 PHACTR1Q9C0D0 580 aa4.97□□□□□ -1.61
LRIF1-203ENST00000494675 SLAIN2Q9P270 581 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms