RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
ZIC4-216ENST00000494569 THRAP3Q9Y2W1 955 aaKnown RBP13.57□□□□□ -0.24
ZIC4-216ENST00000494569 FAM182BQ5T319 152 aa13.57□□□□□ -0.24
ZIC4-216ENST00000494569 COPS6Q7L5N1 327 aa13.57□□□□□ -0.24
ZIC4-216ENST00000494569 SUCLG2Q96I99 432 aa13.57□□□□□ -0.24
ZIC4-216ENST00000494569 MYH3P11055 1940 aa13.56□□□□□ -0.24
ZIC4-216ENST00000494569 GCKRQ14397 625 aa13.56□□□□□ -0.24
ZIC4-216ENST00000494569 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
ZIC4-216ENST00000494569 CD2BP2O95400 341 aaKnown RBP13.55□□□□□ -0.24
ZIC4-216ENST00000494569 PI4K2BQ8TCG2 481 aa13.55□□□□□ -0.24
ZIC4-216ENST00000494569 RHPN1Q8TCX5 695 aa13.55□□□□□ -0.24
ZIC4-216ENST00000494569 FRAT2O75474 233 aaPredicted RBP13.55□□□□□ -0.24
ZIC4-216ENST00000494569 MX1P20591 662 aa13.55□□□□□ -0.24
ZIC4-216ENST00000494569 VSIG10Q8N0Z9 540 aa13.55□□□□□ -0.24
ZIC4-216ENST00000494569 PLBD2Q8NHP8 589 aa13.55□□□□□ -0.24
ZIC4-216ENST00000494569 LAMA4Q16363 1823 aa13.55□□□□□ -0.24
ZIC4-216ENST00000494569 SRGAP3O43295 1099 aa13.54□□□□□ -0.24
ZIC4-216ENST00000494569 EVA1CP58658 441 aa13.54□□□□□ -0.24
ZIC4-216ENST00000494569 RABL6Q3YEC7 729 aaPredicted RBP13.54□□□□□ -0.24
ZIC4-216ENST00000494569 ANKRD13DQ6ZTN6 518 aa13.54□□□□□ -0.24
ZIC4-216ENST00000494569 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
ZIC4-216ENST00000494569 SBF2Q86WG5 1849 aa13.54□□□□□ -0.24
ZIC4-216ENST00000494569 SPEF2Q9C093 1822 aa13.54□□□□□ -0.24
ZIC4-216ENST00000494569 KCNQ2O43526 872 aa13.54□□□□□ -0.24
ZIC4-216ENST00000494569 USP26Q9BXU7 913 aa13.54□□□□□ -0.24
ZIC4-216ENST00000494569 NUP98P52948 1817 aa13.54□□□□□ -0.24
ZIC4-216ENST00000494569 MYL6BP14649 208 aa13.53□□□□□ -0.24
ZIC4-216ENST00000494569 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
ZIC4-216ENST00000494569 HDAC5Q9UQL6 1122 aa13.53□□□□□ -0.24
ZIC4-216ENST00000494569 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
ZIC4-216ENST00000494569 RFX5P48382 616 aaPredicted RBP13.53□□□□□ -0.24
ZIC4-216ENST00000494569 BICC1Q9H694 974 aaKnown RBP13.53□□□□□ -0.24
ZIC4-216ENST00000494569 PIGBQ92521 554 aa13.52□□□□□ -0.24
ZIC4-216ENST00000494569 BECN1Q14457 450 aa13.52□□□□□ -0.24
ZIC4-216ENST00000494569 GSE1Q14687 1217 aa13.52□□□□□ -0.24
ZIC4-216ENST00000494569 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.24
ZIC4-216ENST00000494569 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.24
ZIC4-216ENST00000494569 ATG3Q9NT62 314 aa13.52□□□□□ -0.24
ZIC4-216ENST00000494569 AIMP1Q12904 312 aaKnown RBP13.52□□□□□ -0.25
ZIC4-216ENST00000494569 EPHA10Q5JZY3 1008 aa13.52□□□□□ -0.25
ZIC4-216ENST00000494569 APBB1O00213 710 aa13.51□□□□□ -0.25
ZIC4-216ENST00000494569 MYD88Q99836 296 aa13.51□□□□□ -0.25
ZIC4-216ENST00000494569 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
ZIC4-216ENST00000494569 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
ZIC4-216ENST00000494569 C9orf78Q9NZ63 289 aaPredicted RBP13.51□□□□□ -0.25
ZIC4-216ENST00000494569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.51□□□□□ -0.25
ZIC4-216ENST00000494569 H7C1W4 665 aa13.51□□□□□ -0.25
ZIC4-216ENST00000494569 PLSCR1O15162 318 aa13.51□□□□□ -0.25
ZIC4-216ENST00000494569 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
ZIC4-216ENST00000494569 PIP4K2AP48426 406 aaPredicted RBP13.5□□□□□ -0.25
ZIC4-216ENST00000494569 SASH1O94885 1247 aa13.5□□□□□ -0.25
ZIC4-216ENST00000494569 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
ZIC4-216ENST00000494569 SLC4A9Q96Q91 983 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 EPB41L2O43491 1005 aaKnown RBP13.49□□□□□ -0.25
ZIC4-216ENST00000494569 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 TTLL7Q6ZT98 887 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
ZIC4-216ENST00000494569 BRPF3Q9ULD4 1205 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 A1BGP04217 495 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 CHMLP26374 656 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 FOXO4P98177 505 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 NEXNQ0ZGT2 675 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 SNRKQ9NRH2 765 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 TMOD3Q9NYL9 352 aa13.49□□□□□ -0.25
ZIC4-216ENST00000494569 PPP1R1BQ9UD71 204 aaPredicted RBP13.49□□□□□ -0.25
ZIC4-216ENST00000494569 MYH7P12883 1935 aa13.48□□□□□ -0.25
ZIC4-216ENST00000494569 DOCK2Q92608 1830 aa13.48□□□□□ -0.25
ZIC4-216ENST00000494569 IL25Q9H293 177 aa13.48□□□□□ -0.25
ZIC4-216ENST00000494569 IL1RAPL2Q9NP60 686 aa13.48□□□□□ -0.25
ZIC4-216ENST00000494569 COPRSQ9NQ92 184 aa13.48□□□□□ -0.25
ZIC4-216ENST00000494569 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
ZIC4-216ENST00000494569 ERC1Q8IUD2 1116 aa13.48□□□□□ -0.25
ZIC4-216ENST00000494569 ESYT1Q9BSJ8 1104 aa13.48□□□□□ -0.25
ZIC4-216ENST00000494569 ISCA1Q9BUE6 129 aa13.48□□□□□ -0.25
ZIC4-216ENST00000494569 PA2G4Q9UQ80 394 aaKnown RBP13.47□□□□□ -0.25
ZIC4-216ENST00000494569 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
ZIC4-216ENST00000494569 TEX13AQ9BXU3 409 aaPredicted RBP13.47□□□□□ -0.25
ZIC4-216ENST00000494569 MYH15Q9Y2K3 1946 aa13.47□□□□□ -0.25
ZIC4-216ENST00000494569 ERC2O15083 957 aa13.47□□□□□ -0.25
ZIC4-216ENST00000494569 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
ZIC4-216ENST00000494569 TRIM28Q13263 835 aaKnown RBP13.47□□□□□ -0.25
ZIC4-216ENST00000494569 AKAP11Q9UKA4 1901 aa13.46□□□□□ -0.25
ZIC4-216ENST00000494569 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
ZIC4-216ENST00000494569 CYP19A1P11511 503 aaPredicted RBP13.45□□□□□ -0.26
ZIC4-216ENST00000494569 CCDC191Q8NCU4 936 aa13.45□□□□□ -0.26
ZIC4-216ENST00000494569 SLKQ9H2G2 1235 aaPredicted RBP13.45□□□□□ -0.26
ZIC4-216ENST00000494569 PLCB2Q00722 1185 aa13.44□□□□□ -0.26
ZIC4-216ENST00000494569 KCNB2Q92953 911 aa13.44□□□□□ -0.26
ZIC4-216ENST00000494569 PTCD1O75127 700 aaKnown RBP13.44□□□□□ -0.26
ZIC4-216ENST00000494569 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
ZIC4-216ENST00000494569 COL24A1Q17RW2 1714 aa13.44□□□□□ -0.26
ZIC4-216ENST00000494569 EXOC5O00471 708 aa13.44□□□□□ -0.26
ZIC4-216ENST00000494569 DNAJC10Q8IXB1 793 aa13.44□□□□□ -0.26
ZIC4-216ENST00000494569 EAF2Q96CJ1 260 aaPredicted RBP13.44□□□□□ -0.26
ZIC4-216ENST00000494569 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
ZIC4-216ENST00000494569 SCN7AQ01118 1682 aa13.43□□□□□ -0.26
ZIC4-216ENST00000494569 REC8O95072 547 aa13.43□□□□□ -0.26
ZIC4-216ENST00000494569 CHD4Q14839 1912 aa13.43□□□□□ -0.26
ZIC4-216ENST00000494569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.43□□□□□ -0.26
ZIC4-216ENST00000494569 PLA2G12BQ9BX93 195 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms