RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 PLCH1Q4KWH8 1693 aa19.89■□□□□ 0.77
SYP-208ENST00000494396 ADCY9O60503 1353 aa19.89■□□□□ 0.77
SYP-208ENST00000494396 NUTM2BA6NNL0 878 aaPredicted RBP19.89■□□□□ 0.77
SYP-208ENST00000494396 NUTM2EB1AL46 878 aaPredicted RBP19.89■□□□□ 0.77
SYP-208ENST00000494396 NUTM2AQ8IVF1 878 aaPredicted RBP19.89■□□□□ 0.77
SYP-208ENST00000494396 LRRFIP2Q9Y608 721 aaKnown RBP19.89■□□□□ 0.77
SYP-208ENST00000494396 APBB1O00213 710 aa19.88■□□□□ 0.77
SYP-208ENST00000494396 SMARCA5O60264 1052 aaPredicted RBP19.88■□□□□ 0.77
SYP-208ENST00000494396 UBTFL1P0CB47 393 aaPredicted RBP19.88■□□□□ 0.77
SYP-208ENST00000494396 PDE1AP54750 535 aa19.88■□□□□ 0.77
SYP-208ENST00000494396 CHAF1AQ13111 956 aaPredicted RBP19.88■□□□□ 0.77
SYP-208ENST00000494396 PDIA6Q15084 440 aa19.88■□□□□ 0.77
SYP-208ENST00000494396 DDX58O95786 925 aaKnown RBP19.88■□□□□ 0.77
SYP-208ENST00000494396 KSR2Q6VAB6 950 aa19.88■□□□□ 0.77
SYP-208ENST00000494396 ESYT1Q9BSJ8 1104 aa19.88■□□□□ 0.77
SYP-208ENST00000494396 MX1P20591 662 aa19.87■□□□□ 0.77
SYP-208ENST00000494396 BEND3Q5T5X7 828 aa19.87■□□□□ 0.77
SYP-208ENST00000494396 OTUD7AQ8TE49 926 aaPredicted RBP19.87■□□□□ 0.77
SYP-208ENST00000494396 PNMA6EA0A0J9YXQ4 647 aa19.87■□□□□ 0.77
SYP-208ENST00000494396 ATP6V1DQ9Y5K8 247 aa19.87■□□□□ 0.77
SYP-208ENST00000494396 TMOD3Q9NYL9 352 aa19.86■□□□□ 0.77
SYP-208ENST00000494396 MAP3K2Q9Y2U5 619 aa19.86■□□□□ 0.77
SYP-208ENST00000494396 USP16Q9Y5T5 823 aa19.86■□□□□ 0.77
SYP-208ENST00000494396 CDCA7Q9BWT1 371 aaPredicted RBP19.85■□□□□ 0.77
SYP-208ENST00000494396 EXOC6BQ9Y2D4 811 aa19.85■□□□□ 0.77
SYP-208ENST00000494396 EXOC5O00471 708 aa19.85■□□□□ 0.77
SYP-208ENST00000494396 ZNF710Q8N1W2 664 aa19.85■□□□□ 0.77
SYP-208ENST00000494396 USP25Q9UHP3 1055 aa19.85■□□□□ 0.77
SYP-208ENST00000494396 THRAP3Q9Y2W1 955 aaKnown RBP19.85■□□□□ 0.77
SYP-208ENST00000494396 AOX1Q06278 1338 aa19.84■□□□□ 0.77
SYP-208ENST00000494396 NRAPQ86VF7 1730 aa19.84■□□□□ 0.77
SYP-208ENST00000494396 GOLGA6L6A8MZA4 724 aa19.84■□□□□ 0.77
SYP-208ENST00000494396 ADCY5O95622 1261 aa19.84■□□□□ 0.77
SYP-208ENST00000494396 UBE2HP62256 183 aa19.84■□□□□ 0.77
SYP-208ENST00000494396 PODXL2Q9NZ53 605 aa19.84■□□□□ 0.77
SYP-208ENST00000494396 SPATA31A1Q5TZJ5 1347 aa19.84■□□□□ 0.77
SYP-208ENST00000494396 KDM4AO75164 1064 aa19.83■□□□□ 0.77
SYP-208ENST00000494396 MYL6BP14649 208 aa19.83■□□□□ 0.77
SYP-208ENST00000494396 USP48Q86UV5 1035 aa19.83■□□□□ 0.77
SYP-208ENST00000494396 PAPPAQ13219 1627 aa19.83■□□□□ 0.77
SYP-208ENST00000494396 GLI3P10071 1580 aa19.83■□□□□ 0.77
SYP-208ENST00000494396 SALL3Q9BXA9 1300 aa19.83■□□□□ 0.77
SYP-208ENST00000494396 UBR2Q8IWV8 1755 aa19.83■□□□□ 0.77
SYP-208ENST00000494396 ALDH1L1O75891 902 aa19.83■□□□□ 0.76
SYP-208ENST00000494396 AIMP1Q12904 312 aaKnown RBP19.83■□□□□ 0.76
SYP-208ENST00000494396 SYCP1Q15431 976 aa19.83■□□□□ 0.76
SYP-208ENST00000494396 TAF3Q5VWG9 929 aa19.83■□□□□ 0.76
SYP-208ENST00000494396 FEZ1Q99689 392 aa19.83■□□□□ 0.76
SYP-208ENST00000494396 TNS2Q63HR2 1409 aa19.83■□□□□ 0.76
SYP-208ENST00000494396 TOGARAM1Q9Y4F4 1720 aa19.82■□□□□ 0.76
SYP-208ENST00000494396 SSH3Q8TE77 659 aa19.82■□□□□ 0.76
SYP-208ENST00000494396 LRRCC1Q9C099 1032 aa19.82■□□□□ 0.76
SYP-208ENST00000494396 RPAP1Q9BWH6 1393 aaPredicted RBP19.82■□□□□ 0.76
SYP-208ENST00000494396 KCPQ6ZWJ8 1503 aa19.82■□□□□ 0.76
SYP-208ENST00000494396 LAMB4A4D0S4 1761 aa19.82■□□□□ 0.76
SYP-208ENST00000494396 JCADQ9P266 1359 aa19.82■□□□□ 0.76
SYP-208ENST00000494396 NBPF7P0C2Y1 421 aaPredicted RBP19.82■□□□□ 0.76
SYP-208ENST00000494396 PDIA4P13667 645 aaKnown RBP19.82■□□□□ 0.76
SYP-208ENST00000494396 NWD2Q9ULI1 1742 aa19.82■□□□□ 0.76
SYP-208ENST00000494396 SLIT2O94813 1529 aa19.81■□□□□ 0.76
SYP-208ENST00000494396 WNK3Q9BYP7 1800 aa19.81■□□□□ 0.76
SYP-208ENST00000494396 XAGE3Q8WTP9 111 aa19.81■□□□□ 0.76
SYP-208ENST00000494396 PTCD1O75127 700 aaKnown RBP19.8■□□□□ 0.76
SYP-208ENST00000494396 COPS6Q7L5N1 327 aa19.8■□□□□ 0.76
SYP-208ENST00000494396 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
SYP-208ENST00000494396 LINS1Q8NG48 757 aa19.8■□□□□ 0.76
SYP-208ENST00000494396 KIAA1524Q8TCG1 905 aa19.8■□□□□ 0.76
SYP-208ENST00000494396 STAP2Q9UGK3 403 aa19.8■□□□□ 0.76
SYP-208ENST00000494396 LRP10Q7Z4F1 713 aa19.8■□□□□ 0.76
SYP-208ENST00000494396 SPATA31A5Q5VU36 1347 aa19.8■□□□□ 0.76
SYP-208ENST00000494396 SPATA31A7Q8IWB4 1347 aa19.8■□□□□ 0.76
SYP-208ENST00000494396 CTIFO43310 598 aaKnown RBP19.79■□□□□ 0.76
SYP-208ENST00000494396 CHMLP26374 656 aa19.79■□□□□ 0.76
SYP-208ENST00000494396 POLA2Q14181 598 aa19.79■□□□□ 0.76
SYP-208ENST00000494396 PPP4R3BQ5MIZ7 849 aa19.79■□□□□ 0.76
SYP-208ENST00000494396 PPP1R42Q7Z4L9 355 aa19.79■□□□□ 0.76
SYP-208ENST00000494396 PDCL2Q8N4E4 241 aa19.79■□□□□ 0.76
SYP-208ENST00000494396 PIGBQ92521 554 aa19.79■□□□□ 0.76
SYP-208ENST00000494396 ANKRD7Q92527 254 aa19.79■□□□□ 0.76
SYP-208ENST00000494396 LRP6O75581 1613 aa19.79■□□□□ 0.76
SYP-208ENST00000494396 HDAC5Q9UQL6 1122 aa19.79■□□□□ 0.76
SYP-208ENST00000494396 NEXNQ0ZGT2 675 aa19.78■□□□□ 0.76
SYP-208ENST00000494396 FOXD4L5Q5VV16 416 aaPredicted RBP19.78■□□□□ 0.76
SYP-208ENST00000494396 FOXD4L4Q8WXT5 416 aaPredicted RBP19.78■□□□□ 0.76
SYP-208ENST00000494396 BCL2L12Q9HB09 334 aa19.78■□□□□ 0.76
SYP-208ENST00000494396 C9orf78Q9NZ63 289 aaPredicted RBP19.78■□□□□ 0.76
SYP-208ENST00000494396 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.78■□□□□ 0.76
SYP-208ENST00000494396 TCHHQ07283 1943 aa19.78■□□□□ 0.76
SYP-208ENST00000494396 DDB1Q16531 1140 aa19.77■□□□□ 0.76
SYP-208ENST00000494396 ANKRD13DQ6ZTN6 518 aa19.77■□□□□ 0.76
SYP-208ENST00000494396 CERKQ8TCT0 537 aa19.77■□□□□ 0.76
SYP-208ENST00000494396 CCDC9Q9Y3X0 531 aaKnown RBP19.77■□□□□ 0.76
SYP-208ENST00000494396 GADD45BO75293 160 aaPredicted RBP19.77■□□□□ 0.75
SYP-208ENST00000494396 ZSCAN22P10073 491 aaPredicted RBP19.77■□□□□ 0.75
SYP-208ENST00000494396 PIP4K2AP48426 406 aaPredicted RBP19.77■□□□□ 0.75
SYP-208ENST00000494396 CHAMP1Q96JM3 812 aa19.77■□□□□ 0.75
SYP-208ENST00000494396 CWF19L2Q2TBE0 894 aaKnown RBP19.76■□□□□ 0.75
SYP-208ENST00000494396 BARGINQ6ZT62 677 aa19.76■□□□□ 0.75
SYP-208ENST00000494396 TTC12Q9H892 705 aaPredicted RBP19.76■□□□□ 0.75
SYP-208ENST00000494396 ANO2Q9NQ90 1003 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms