RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 NLRP10Q86W26 655 aa14.31□□□□□ -0.12
MCF2L-231ENST00000494043 BCL2L12Q9HB09 334 aa14.31□□□□□ -0.12
MCF2L-231ENST00000494043 ANO8Q9HCE9 1232 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-231ENST00000494043 TFCP2L1Q9NZI6 479 aa14.31□□□□□ -0.12
MCF2L-231ENST00000494043 UBN2Q6ZU65 1347 aa14.31□□□□□ -0.12
MCF2L-231ENST00000494043 H7C1W4 665 aa14.3□□□□□ -0.12
MCF2L-231ENST00000494043 FLAD1Q8NFF5 587 aa14.3□□□□□ -0.12
MCF2L-231ENST00000494043 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
MCF2L-231ENST00000494043 LRRFIP2Q9Y608 721 aaKnown RBP14.3□□□□□ -0.12
MCF2L-231ENST00000494043 CASP7P55210 303 aa14.29□□□□□ -0.12
MCF2L-231ENST00000494043 PARP10Q53GL7 1025 aa14.29□□□□□ -0.12
MCF2L-231ENST00000494043 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
MCF2L-231ENST00000494043 UBE3BQ7Z3V4 1068 aa14.29□□□□□ -0.12
MCF2L-231ENST00000494043 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.12
MCF2L-231ENST00000494043 STK32BQ9NY57 414 aa14.29□□□□□ -0.12
MCF2L-231ENST00000494043 PCCAP05165 728 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-231ENST00000494043 HDAC1Q13547 482 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-231ENST00000494043 SLC15A2Q16348 729 aa14.28□□□□□ -0.12
MCF2L-231ENST00000494043 QSER1Q2KHR3 1735 aa14.28□□□□□ -0.12
MCF2L-231ENST00000494043 PNPLA7Q6ZV29 1317 aa14.28□□□□□ -0.12
MCF2L-231ENST00000494043 RPAP2Q8IXW5 612 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-231ENST00000494043 ANKRD44Q8N8A2 993 aa14.28□□□□□ -0.12
MCF2L-231ENST00000494043 ZBTB38Q8NAP3 1195 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-231ENST00000494043 SUCLG2Q96I99 432 aa14.28□□□□□ -0.12
MCF2L-231ENST00000494043 NIP7Q9Y221 180 aaKnown RBP eCLIP14.28□□□□□ -0.12
MCF2L-231ENST00000494043 COL24A1Q17RW2 1714 aa14.27□□□□□ -0.12
MCF2L-231ENST00000494043 SOCS7O14512 581 aa14.27□□□□□ -0.13
MCF2L-231ENST00000494043 GYS1P13807 737 aa14.27□□□□□ -0.13
MCF2L-231ENST00000494043 TBC1D9BQ66K14 1250 aa14.27□□□□□ -0.13
MCF2L-231ENST00000494043 COL23A1Q86Y22 540 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-231ENST00000494043 SIRT2Q8IXJ6 389 aa14.27□□□□□ -0.13
MCF2L-231ENST00000494043 JARID2Q92833 1246 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-231ENST00000494043 RWDD1Q9H446 243 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-231ENST00000494043 KDM2BQ8NHM5 1336 aa14.26□□□□□ -0.13
MCF2L-231ENST00000494043 CDHR2Q9BYE9 1310 aa14.26□□□□□ -0.13
MCF2L-231ENST00000494043 IGHDP01880 384 aa14.26□□□□□ -0.13
MCF2L-231ENST00000494043 SUSD4Q5VX71 490 aa14.26□□□□□ -0.13
MCF2L-231ENST00000494043 KAZALD1Q96I82 304 aa14.26□□□□□ -0.13
MCF2L-231ENST00000494043 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
MCF2L-231ENST00000494043 NTSR2O95665 410 aa14.25□□□□□ -0.13
MCF2L-231ENST00000494043 MTX1Q13505 466 aa14.25□□□□□ -0.13
MCF2L-231ENST00000494043 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-231ENST00000494043 BICDL1Q6ZP65 573 aa14.25□□□□□ -0.13
MCF2L-231ENST00000494043 CENPQQ7L2Z9 268 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-231ENST00000494043 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
MCF2L-231ENST00000494043 FAM89AQ96GI7 184 aa14.25□□□□□ -0.13
MCF2L-231ENST00000494043 UTP14AQ9BVJ6 771 aaKnown RBP14.25□□□□□ -0.13
MCF2L-231ENST00000494043 BICC1Q9H694 974 aaKnown RBP14.25□□□□□ -0.13
MCF2L-231ENST00000494043 SH3TC1Q8TE82 1336 aa14.24□□□□□ -0.13
MCF2L-231ENST00000494043 HMMRO75330 724 aa14.24□□□□□ -0.13
MCF2L-231ENST00000494043 ATP8B2P98198 1209 aa14.24□□□□□ -0.13
MCF2L-231ENST00000494043 EPHA10Q5JZY3 1008 aa14.24□□□□□ -0.13
MCF2L-231ENST00000494043 SETDB2Q96T68 719 aa14.24□□□□□ -0.13
MCF2L-231ENST00000494043 PLA2G12BQ9BX93 195 aa14.24□□□□□ -0.13
MCF2L-231ENST00000494043 CARMIL3Q8ND23 1372 aa14.23□□□□□ -0.13
MCF2L-231ENST00000494043 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
MCF2L-231ENST00000494043 FAM177BA6PVY3 158 aa14.23□□□□□ -0.13
MCF2L-231ENST00000494043 NFIXQ14938 502 aa14.23□□□□□ -0.13
MCF2L-231ENST00000494043 RABL6Q3YEC7 729 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-231ENST00000494043 SYNE4Q8N205 404 aa14.23□□□□□ -0.13
MCF2L-231ENST00000494043 NYXQ9GZU5 481 aa14.23□□□□□ -0.13
MCF2L-231ENST00000494043 IRS4O14654 1257 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-231ENST00000494043 SRGAP3O43295 1099 aa14.22□□□□□ -0.13
MCF2L-231ENST00000494043 FOXO4P98177 505 aa14.22□□□□□ -0.13
MCF2L-231ENST00000494043 POLA2Q14181 598 aa14.22□□□□□ -0.13
MCF2L-231ENST00000494043 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
MCF2L-231ENST00000494043 LAMB2P55268 1798 aa14.22□□□□□ -0.13
MCF2L-231ENST00000494043 TM4SF1P30408 202 aa14.21□□□□□ -0.13
MCF2L-231ENST00000494043 NBPF5PQ86XG9 351 aaPredicted RBP14.21□□□□□ -0.13
MCF2L-231ENST00000494043 NLGN1Q8N2Q7 840 aa14.21□□□□□ -0.13
MCF2L-231ENST00000494043 PDE8AO60658 829 aa14.2□□□□□ -0.14
MCF2L-231ENST00000494043 HSP90B1P14625 803 aaKnown RBP14.2□□□□□ -0.14
MCF2L-231ENST00000494043 ERFEQ4G0M1 354 aa14.2□□□□□ -0.14
MCF2L-231ENST00000494043 LMBR1LQ6UX01 489 aa14.2□□□□□ -0.14
MCF2L-231ENST00000494043 NUTM1Q86Y26 1132 aa14.2□□□□□ -0.14
MCF2L-231ENST00000494043 SMC5Q8IY18 1101 aa14.2□□□□□ -0.14
MCF2L-231ENST00000494043 DCTPP1Q9H773 170 aa14.2□□□□□ -0.14
MCF2L-231ENST00000494043 DDX60Q8IY21 1712 aaKnown RBP14.2□□□□□ -0.14
MCF2L-231ENST00000494043 ABCC12Q96J65 1359 aa14.2□□□□□ -0.14
MCF2L-231ENST00000494043 HCLS1P14317 486 aaPredicted RBP14.19□□□□□ -0.14
MCF2L-231ENST00000494043 CTSWP56202 376 aa14.19□□□□□ -0.14
MCF2L-231ENST00000494043 DDR1Q08345 913 aa14.19□□□□□ -0.14
MCF2L-231ENST00000494043 TPTE2Q6XPS3 522 aa14.19□□□□□ -0.14
MCF2L-231ENST00000494043 GCC1Q96CN9 775 aa14.19□□□□□ -0.14
MCF2L-231ENST00000494043 POLRMTO00411 1230 aaKnown RBP14.18□□□□□ -0.14
MCF2L-231ENST00000494043 CSF1RP07333 972 aa14.18□□□□□ -0.14
MCF2L-231ENST00000494043 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
MCF2L-231ENST00000494043 SLC10A5Q5PT55 438 aa14.18□□□□□ -0.14
MCF2L-231ENST00000494043 MSL1Q68DK7 614 aa14.18□□□□□ -0.14
MCF2L-231ENST00000494043 CNBD1Q8NA66 436 aa14.18□□□□□ -0.14
MCF2L-231ENST00000494043 CHMP3Q9Y3E7 222 aa14.18□□□□□ -0.14
MCF2L-231ENST00000494043 RIC1Q4ADV7 1423 aa14.17□□□□□ -0.14
MCF2L-231ENST00000494043 SERPINB2P05120 415 aa14.17□□□□□ -0.14
MCF2L-231ENST00000494043 RFX5P48382 616 aaPredicted RBP14.17□□□□□ -0.14
MCF2L-231ENST00000494043 TTLL11Q8NHH1 800 aa14.17□□□□□ -0.14
MCF2L-231ENST00000494043 MYH3P11055 1940 aa14.17□□□□□ -0.14
MCF2L-231ENST00000494043 NPHP1O15259 732 aa14.16□□□□□ -0.14
MCF2L-231ENST00000494043 MMP10P09238 476 aa14.16□□□□□ -0.14
MCF2L-231ENST00000494043 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
MCF2L-231ENST00000494043 PRR5LQ6MZQ0 368 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms