RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 MVPQ14764 893 aaKnown RBP18.78■□□□□ 0.6
ACTB-213ENST00000493945 TBC1D9BQ66K14 1250 aa18.78■□□□□ 0.6
ACTB-213ENST00000493945 UTP14AQ9BVJ6 771 aaKnown RBP18.78■□□□□ 0.6
ACTB-213ENST00000493945 PSDA5PKW4 1024 aaPredicted RBP18.77■□□□□ 0.6
ACTB-213ENST00000493945 ATP5J2-PTCD1G3V325 749 aa18.77■□□□□ 0.6
ACTB-213ENST00000493945 AAMPQ13685 434 aa18.77■□□□□ 0.6
ACTB-213ENST00000493945 SMIM5Q71RC9 77 aa18.77■□□□□ 0.6
ACTB-213ENST00000493945 NLRP10Q86W26 655 aa18.77■□□□□ 0.6
ACTB-213ENST00000493945 CNBD1Q8NA66 436 aa18.77■□□□□ 0.6
ACTB-213ENST00000493945 BCL2L12Q9HB09 334 aa18.77■□□□□ 0.6
ACTB-213ENST00000493945 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
ACTB-213ENST00000493945 SH3TC1Q8TE82 1336 aa18.76■□□□□ 0.59
ACTB-213ENST00000493945 MMP10P09238 476 aa18.76■□□□□ 0.59
ACTB-213ENST00000493945 GCKRQ14397 625 aa18.76■□□□□ 0.59
ACTB-213ENST00000493945 NFIXQ14938 502 aa18.76■□□□□ 0.59
ACTB-213ENST00000493945 TMEM57Q8N5G2 664 aa18.76■□□□□ 0.59
ACTB-213ENST00000493945 GRM8O00222 908 aa18.75■□□□□ 0.59
ACTB-213ENST00000493945 PCCAP05165 728 aaPredicted RBP18.75■□□□□ 0.59
ACTB-213ENST00000493945 UBTFL1P0CB47 393 aaPredicted RBP18.75■□□□□ 0.59
ACTB-213ENST00000493945 CWF19L2Q2TBE0 894 aaKnown RBP18.75■□□□□ 0.59
ACTB-213ENST00000493945 MSL1Q68DK7 614 aa18.75■□□□□ 0.59
ACTB-213ENST00000493945 ZBTB38Q8NAP3 1195 aaPredicted RBP18.75■□□□□ 0.59
ACTB-213ENST00000493945 LAMB2P55268 1798 aa18.74■□□□□ 0.59
ACTB-213ENST00000493945 IGKV5-2P06315 115 aa18.74■□□□□ 0.59
ACTB-213ENST00000493945 PANK1Q8TE04 598 aa18.74■□□□□ 0.59
ACTB-213ENST00000493945 SPON1Q9HCB6 807 aa18.74■□□□□ 0.59
ACTB-213ENST00000493945 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
ACTB-213ENST00000493945 MYH3P11055 1940 aa18.73■□□□□ 0.59
ACTB-213ENST00000493945 ZBTB7AO95365 584 aa18.73■□□□□ 0.59
ACTB-213ENST00000493945 SERPINB2P05120 415 aa18.73■□□□□ 0.59
ACTB-213ENST00000493945 TM4SF1P30408 202 aa18.73■□□□□ 0.59
ACTB-213ENST00000493945 CDHR2Q9BYE9 1310 aa18.73■□□□□ 0.59
ACTB-213ENST00000493945 POLRMTO00411 1230 aaKnown RBP18.72■□□□□ 0.59
ACTB-213ENST00000493945 UBE3BQ7Z3V4 1068 aa18.72■□□□□ 0.59
ACTB-213ENST00000493945 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
ACTB-213ENST00000493945 COG6Q9Y2V7 657 aa18.72■□□□□ 0.59
ACTB-213ENST00000493945 RIC1Q4ADV7 1423 aa18.72■□□□□ 0.59
ACTB-213ENST00000493945 NRXN2Q9P2S2 1712 aa18.71■□□□□ 0.59
ACTB-213ENST00000493945 FAM177BA6PVY3 158 aa18.71■□□□□ 0.59
ACTB-213ENST00000493945 NTSR2O95665 410 aa18.71■□□□□ 0.59
ACTB-213ENST00000493945 SUSD4Q5VX71 490 aa18.71■□□□□ 0.59
ACTB-213ENST00000493945 RLBP1P12271 317 aa18.7■□□□□ 0.58
ACTB-213ENST00000493945 UTYO14607 1347 aa18.7■□□□□ 0.58
ACTB-213ENST00000493945 GNAI2P04899 355 aa18.69■□□□□ 0.58
ACTB-213ENST00000493945 H7C1W4 665 aa18.68■□□□□ 0.58
ACTB-213ENST00000493945 IRS4O14654 1257 aaPredicted RBP18.68■□□□□ 0.58
ACTB-213ENST00000493945 PDE6BP35913 854 aa18.68■□□□□ 0.58
ACTB-213ENST00000493945 DDR1Q08345 913 aa18.68■□□□□ 0.58
ACTB-213ENST00000493945 NLRP3Q96P20 1036 aa18.68■□□□□ 0.58
ACTB-213ENST00000493945 TNNQ9UQP3 1299 aa18.68■□□□□ 0.58
ACTB-213ENST00000493945 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
ACTB-213ENST00000493945 PDE8AO60658 829 aa18.67■□□□□ 0.58
ACTB-213ENST00000493945 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
ACTB-213ENST00000493945 PRR5LQ6MZQ0 368 aa18.67■□□□□ 0.58
ACTB-213ENST00000493945 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
ACTB-213ENST00000493945 PDGFDQ9GZP0 370 aaPredicted RBP18.67■□□□□ 0.58
ACTB-213ENST00000493945 USP44Q9H0E7 712 aa18.67■□□□□ 0.58
ACTB-213ENST00000493945 MEIS3Q99687 375 aa18.66■□□□□ 0.58
ACTB-213ENST00000493945 PLA2G12BQ9BX93 195 aa18.66■□□□□ 0.58
ACTB-213ENST00000493945 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
ACTB-213ENST00000493945 ERFEQ4G0M1 354 aa18.65■□□□□ 0.58
ACTB-213ENST00000493945 CCDC152Q4G0S7 254 aa18.65■□□□□ 0.58
ACTB-213ENST00000493945 RTL5Q5HYW3 569 aaPredicted RBP18.65■□□□□ 0.58
ACTB-213ENST00000493945 NUTM1Q86Y26 1132 aa18.65■□□□□ 0.58
ACTB-213ENST00000493945 CRBNQ96SW2 442 aa18.65■□□□□ 0.58
ACTB-213ENST00000493945 BRIP1Q9BX63 1249 aa18.65■□□□□ 0.58
ACTB-213ENST00000493945 DDX60Q8IY21 1712 aaKnown RBP18.65■□□□□ 0.58
ACTB-213ENST00000493945 C10orf71Q711Q0 1435 aa18.65■□□□□ 0.58
ACTB-213ENST00000493945 ZBTB7BO15156 539 aaPredicted RBP18.64■□□□□ 0.57
ACTB-213ENST00000493945 HMMRO75330 724 aa18.64■□□□□ 0.57
ACTB-213ENST00000493945 NBPF7P0C2Y1 421 aaPredicted RBP18.64■□□□□ 0.57
ACTB-213ENST00000493945 SLC10A5Q5PT55 438 aa18.64■□□□□ 0.57
ACTB-213ENST00000493945 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
ACTB-213ENST00000493945 CTSWP56202 376 aa18.63■□□□□ 0.57
ACTB-213ENST00000493945 RPGRQ92834 1020 aaKnown RBP18.63■□□□□ 0.57
ACTB-213ENST00000493945 CHMP3Q9Y3E7 222 aa18.63■□□□□ 0.57
ACTB-213ENST00000493945 KIF13BQ9NQT8 1826 aa18.63■□□□□ 0.57
ACTB-213ENST00000493945 LRRFIP2Q9Y608 721 aaKnown RBP18.62■□□□□ 0.57
ACTB-213ENST00000493945 ABCC12Q96J65 1359 aa18.62■□□□□ 0.57
ACTB-213ENST00000493945 LRP5O75197 1615 aa18.61■□□□□ 0.57
ACTB-213ENST00000493945 CASP7P55210 303 aa18.61■□□□□ 0.57
ACTB-213ENST00000493945 RPAP2Q8IXW5 612 aaPredicted RBP18.61■□□□□ 0.57
ACTB-213ENST00000493945 SUCLG2Q96I99 432 aa18.61■□□□□ 0.57
ACTB-213ENST00000493945 ZBTB40Q9NUA8 1239 aa18.61■□□□□ 0.57
ACTB-213ENST00000493945 CD2APQ9Y5K6 639 aa18.61■□□□□ 0.57
ACTB-213ENST00000493945 H0YIN7 160 aa18.6■□□□□ 0.57
ACTB-213ENST00000493945 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
ACTB-213ENST00000493945 CCDC57Q2TAC2 916 aa18.6■□□□□ 0.57
ACTB-213ENST00000493945 TAF7LQ5H9L4 462 aa18.6■□□□□ 0.57
ACTB-213ENST00000493945 DDX46Q7L014 1031 aaKnown RBP18.6■□□□□ 0.57
ACTB-213ENST00000493945 RBM17Q96I25 401 aaKnown RBP18.6■□□□□ 0.57
ACTB-213ENST00000493945 CDC5LQ99459 802 aaKnown RBP18.6■□□□□ 0.57
ACTB-213ENST00000493945 TMX4Q9H1E5 349 aaPredicted RBP18.6■□□□□ 0.57
ACTB-213ENST00000493945 ANKRD31Q8N7Z5 1873 aa18.6■□□□□ 0.57
ACTB-213ENST00000493945 RTL9Q8NET4 1388 aa18.59■□□□□ 0.57
ACTB-213ENST00000493945 TGFB2P61812 414 aa18.59■□□□□ 0.57
ACTB-213ENST00000493945 IRX6P78412 446 aaPredicted RBP18.59■□□□□ 0.57
ACTB-213ENST00000493945 IFIT5Q13325 482 aaKnown RBP18.59■□□□□ 0.57
ACTB-213ENST00000493945 SF3B3Q15393 1217 aaKnown RBP18.59■□□□□ 0.57
ACTB-213ENST00000493945 KLHL34Q8N239 644 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms