RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 C5P01031 1676 aa11.59□□□□□ -0.55
NPHP3-209ENST00000493732 WDR17Q8IZU2 1322 aa11.59□□□□□ -0.55
NPHP3-209ENST00000493732 KCNJ4P48050 445 aa11.58□□□□□ -0.55
NPHP3-209ENST00000493732 LRP10Q7Z4F1 713 aa11.58□□□□□ -0.55
NPHP3-209ENST00000493732 MAP4K1Q92918 833 aa11.58□□□□□ -0.55
NPHP3-209ENST00000493732 HMG20BQ9P0W2 317 aa11.58□□□□□ -0.55
NPHP3-209ENST00000493732 USP16Q9Y5T5 823 aa11.58□□□□□ -0.55
NPHP3-209ENST00000493732 ATP5JP18859 108 aa11.58□□□□□ -0.56
NPHP3-209ENST00000493732 CASTP20810 708 aaKnown RBP11.58□□□□□ -0.56
NPHP3-209ENST00000493732 AK2P54819 239 aa11.58□□□□□ -0.56
NPHP3-209ENST00000493732 NECTIN1Q15223 517 aa11.58□□□□□ -0.56
NPHP3-209ENST00000493732 ZCRB1Q8TBF4 217 aaKnown RBP11.58□□□□□ -0.56
NPHP3-209ENST00000493732 PDRG1Q9NUG6 133 aa11.58□□□□□ -0.56
NPHP3-209ENST00000493732 SMC3Q9UQE7 1217 aa11.58□□□□□ -0.56
NPHP3-209ENST00000493732 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
NPHP3-209ENST00000493732 KRT32Q14532 448 aa11.57□□□□□ -0.56
NPHP3-209ENST00000493732 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-209ENST00000493732 CHRNA2Q15822 529 aa11.57□□□□□ -0.56
NPHP3-209ENST00000493732 RUFY3Q7L099 469 aa11.57□□□□□ -0.56
NPHP3-209ENST00000493732 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
NPHP3-209ENST00000493732 CABLES1Q8TDN4 633 aa11.57□□□□□ -0.56
NPHP3-209ENST00000493732 PPP1R9BQ96SB3 815 aa11.57□□□□□ -0.56
NPHP3-209ENST00000493732 FSD1Q9BTV5 496 aa11.57□□□□□ -0.56
NPHP3-209ENST00000493732 ALDH8A1Q9H2A2 487 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-209ENST00000493732 PRDM11Q9NQV5 511 aa11.57□□□□□ -0.56
NPHP3-209ENST00000493732 STRCP1A6NGW2 1772 aa11.57□□□□□ -0.56
NPHP3-209ENST00000493732 PRPF40BQ6NWY9 871 aaKnown RBP11.56□□□□□ -0.56
NPHP3-209ENST00000493732 NOL8Q76FK4 1167 aaKnown RBP11.56□□□□□ -0.56
NPHP3-209ENST00000493732 TMEM87AQ8NBN3 555 aa11.56□□□□□ -0.56
NPHP3-209ENST00000493732 JAKMIP1Q96N16 626 aaKnown RBP11.56□□□□□ -0.56
NPHP3-209ENST00000493732 CCDC8Q9H0W5 538 aaPredicted RBP11.56□□□□□ -0.56
NPHP3-209ENST00000493732 A0A087WZG4 1122 aa11.56□□□□□ -0.56
NPHP3-209ENST00000493732 LETM1O95202 739 aaPredicted RBP11.56□□□□□ -0.56
NPHP3-209ENST00000493732 ZSCAN22P10073 491 aaPredicted RBP11.56□□□□□ -0.56
NPHP3-209ENST00000493732 CLCN1P35523 988 aa11.56□□□□□ -0.56
NPHP3-209ENST00000493732 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
NPHP3-209ENST00000493732 LRSAM1Q6UWE0 723 aa11.56□□□□□ -0.56
NPHP3-209ENST00000493732 TOM1L2Q6ZVM7 507 aa11.56□□□□□ -0.56
NPHP3-209ENST00000493732 GPT2Q8TD30 523 aa11.56□□□□□ -0.56
NPHP3-209ENST00000493732 DDX17Q92841 729 aaKnown RBP11.56□□□□□ -0.56
NPHP3-209ENST00000493732 SIL1Q9H173 461 aa11.56□□□□□ -0.56
NPHP3-209ENST00000493732 GPR108Q9NPR9 543 aa11.56□□□□□ -0.56
NPHP3-209ENST00000493732 RBM8AQ9Y5S9 174 aaKnown RBP11.56□□□□□ -0.56
NPHP3-209ENST00000493732 STX6O43752 255 aa11.55□□□□□ -0.56
NPHP3-209ENST00000493732 PDCP20941 246 aa11.55□□□□□ -0.56
NPHP3-209ENST00000493732 PTPN12Q05209 780 aaKnown RBP11.55□□□□□ -0.56
NPHP3-209ENST00000493732 NMIQ13287 307 aaPredicted RBP11.55□□□□□ -0.56
NPHP3-209ENST00000493732 HS1BP3Q53T59 392 aa11.55□□□□□ -0.56
NPHP3-209ENST00000493732 CREB3L3Q68CJ9 461 aa11.55□□□□□ -0.56
NPHP3-209ENST00000493732 BRINP3Q76B58 766 aa11.55□□□□□ -0.56
NPHP3-209ENST00000493732 UBE3BQ7Z3V4 1068 aa11.55□□□□□ -0.56
NPHP3-209ENST00000493732 CARD10Q9BWT7 1032 aa11.55□□□□□ -0.56
NPHP3-209ENST00000493732 ATG3Q9NT62 314 aa11.55□□□□□ -0.56
NPHP3-209ENST00000493732 SOS2Q07890 1332 aaPredicted RBP11.55□□□□□ -0.56
NPHP3-209ENST00000493732 H7C1W4 665 aa11.54□□□□□ -0.56
NPHP3-209ENST00000493732 IL2RBP14784 551 aa11.54□□□□□ -0.56
NPHP3-209ENST00000493732 RFX5P48382 616 aaPredicted RBP11.54□□□□□ -0.56
NPHP3-209ENST00000493732 PTH1RQ03431 593 aa11.54□□□□□ -0.56
NPHP3-209ENST00000493732 TNNI3KQ59H18 835 aa11.54□□□□□ -0.56
NPHP3-209ENST00000493732 BOLA2Q9H3K6 86 aa11.54□□□□□ -0.56
NPHP3-209ENST00000493732 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
NPHP3-209ENST00000493732 FPGT-TNNI3KV9GXZ4 949 aa11.54□□□□□ -0.56
NPHP3-209ENST00000493732 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
NPHP3-209ENST00000493732 TEX13AQ9BXU3 409 aaPredicted RBP11.54□□□□□ -0.56
NPHP3-209ENST00000493732 ARFGEF2Q9Y6D5 1785 aa11.54□□□□□ -0.56
NPHP3-209ENST00000493732 RPAP1Q9BWH6 1393 aaPredicted RBP11.53□□□□□ -0.56
NPHP3-209ENST00000493732 JCADQ9P266 1359 aa11.53□□□□□ -0.56
NPHP3-209ENST00000493732 MED23Q9ULK4 1368 aa11.53□□□□□ -0.56
NPHP3-209ENST00000493732 ESPNB1AK53 854 aa11.53□□□□□ -0.56
NPHP3-209ENST00000493732 CASP7P55210 303 aa11.53□□□□□ -0.56
NPHP3-209ENST00000493732 EPHA10Q5JZY3 1008 aa11.53□□□□□ -0.56
NPHP3-209ENST00000493732 BLOC1S2Q6QNY1 142 aa11.53□□□□□ -0.56
NPHP3-209ENST00000493732 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
NPHP3-209ENST00000493732 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
NPHP3-209ENST00000493732 SLC27A2O14975 620 aa11.52□□□□□ -0.56
NPHP3-209ENST00000493732 SYT1P21579 422 aa11.52□□□□□ -0.56
NPHP3-209ENST00000493732 IL15P40933 162 aaPredicted RBP11.52□□□□□ -0.56
NPHP3-209ENST00000493732 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.56
NPHP3-209ENST00000493732 CHMP4CQ96CF2 233 aa11.52□□□□□ -0.56
NPHP3-209ENST00000493732 FAM227BQ96M60 508 aa11.52□□□□□ -0.56
NPHP3-209ENST00000493732 HAUS7Q99871 368 aa11.52□□□□□ -0.56
NPHP3-209ENST00000493732 SLAIN2Q9P270 581 aa11.52□□□□□ -0.56
NPHP3-209ENST00000493732 U3KPZ7 1027 aaPredicted RBP11.52□□□□□ -0.56
NPHP3-209ENST00000493732 COL5A2P05997 1499 aaPredicted RBP11.52□□□□□ -0.57
NPHP3-209ENST00000493732 F13A1P00488 732 aa11.52□□□□□ -0.57
NPHP3-209ENST00000493732 TFCP2Q12800 502 aa11.52□□□□□ -0.57
NPHP3-209ENST00000493732 LRRFIP1Q32MZ4 808 aaKnown RBP11.52□□□□□ -0.57
NPHP3-209ENST00000493732 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
NPHP3-209ENST00000493732 FAM184AQ8NB25 1140 aa11.52□□□□□ -0.57
NPHP3-209ENST00000493732 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
NPHP3-209ENST00000493732 RRAGDQ9NQL2 400 aaPredicted RBP11.52□□□□□ -0.57
NPHP3-209ENST00000493732 TLR7Q9NYK1 1049 aaKnown RBP11.52□□□□□ -0.57
NPHP3-209ENST00000493732 TMEM63CQ9P1W3 806 aa11.52□□□□□ -0.57
NPHP3-209ENST00000493732 DBNLQ9UJU6 430 aaKnown RBP11.52□□□□□ -0.57
NPHP3-209ENST00000493732 CIAO1O76071 339 aa11.51□□□□□ -0.57
NPHP3-209ENST00000493732 HMGB1P09429 215 aaKnown RBP11.51□□□□□ -0.57
NPHP3-209ENST00000493732 PRIM1P49642 420 aaKnown RBP11.51□□□□□ -0.57
NPHP3-209ENST00000493732 UBE2HP62256 183 aa11.51□□□□□ -0.57
NPHP3-209ENST00000493732 LMBR1LQ6UX01 489 aa11.51□□□□□ -0.57
NPHP3-209ENST00000493732 UBR2Q8IWV8 1755 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms