RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 PTMSP20962 102 aa13.09□□□□□ -0.31
PHACTR4-204ENST00000493669 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
PHACTR4-204ENST00000493669 ISCA1Q9BUE6 129 aa13.09□□□□□ -0.31
PHACTR4-204ENST00000493669 MAP4K4O95819 1239 aaPredicted RBP13.09□□□□□ -0.31
PHACTR4-204ENST00000493669 FOXO4P98177 505 aa13.09□□□□□ -0.31
PHACTR4-204ENST00000493669 GBP4Q96PP9 640 aa13.09□□□□□ -0.31
PHACTR4-204ENST00000493669 SIL1Q9H173 461 aa13.09□□□□□ -0.31
PHACTR4-204ENST00000493669 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
PHACTR4-204ENST00000493669 ASAP1Q9ULH1 1129 aa13.08□□□□□ -0.32
PHACTR4-204ENST00000493669 RFX7Q2KHR2 1363 aa13.08□□□□□ -0.32
PHACTR4-204ENST00000493669 TCIRG1Q13488 830 aa13.08□□□□□ -0.32
PHACTR4-204ENST00000493669 KIF6Q6ZMV9 814 aa13.08□□□□□ -0.32
PHACTR4-204ENST00000493669 CLEC17AQ6ZS10 378 aa13.08□□□□□ -0.32
PHACTR4-204ENST00000493669 NWD2Q9ULI1 1742 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 NEK4P51957 841 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 NUCB2P80303 420 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 LMBR1LQ6UX01 489 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 GPR108Q9NPR9 543 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 TNNI3KQ59H18 835 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 CCDC8Q9H0W5 538 aaPredicted RBP13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 IL25Q9H293 177 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 FPGT-TNNI3KV9GXZ4 949 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 ATP5JP18859 108 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 TICAM2Q86XR7 235 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 KLHDC4Q8TBB5 520 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
PHACTR4-204ENST00000493669 SPATA31A1Q5TZJ5 1347 aa13.06□□□□□ -0.32
PHACTR4-204ENST00000493669 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
PHACTR4-204ENST00000493669 HSP90AB3PQ58FF7 597 aa13.06□□□□□ -0.32
PHACTR4-204ENST00000493669 CWC27Q6UX04 472 aaKnown RBP13.06□□□□□ -0.32
PHACTR4-204ENST00000493669 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.06□□□□□ -0.32
PHACTR4-204ENST00000493669 CIAO1O76071 339 aa13.05□□□□□ -0.32
PHACTR4-204ENST00000493669 PLA2G12BQ9BX93 195 aa13.05□□□□□ -0.32
PHACTR4-204ENST00000493669 TLR7Q9NYK1 1049 aaKnown RBP13.05□□□□□ -0.32
PHACTR4-204ENST00000493669 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
PHACTR4-204ENST00000493669 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
PHACTR4-204ENST00000493669 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
PHACTR4-204ENST00000493669 IL15P40933 162 aaPredicted RBP13.05□□□□□ -0.32
PHACTR4-204ENST00000493669 TFCP2Q12800 502 aa13.05□□□□□ -0.32
PHACTR4-204ENST00000493669 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
PHACTR4-204ENST00000493669 CUL4AQ13619 759 aa13.04□□□□□ -0.32
PHACTR4-204ENST00000493669 KCNB2Q92953 911 aa13.04□□□□□ -0.32
PHACTR4-204ENST00000493669 INTS4Q96HW7 963 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-204ENST00000493669 CICQ96RK0 1608 aaPredicted RBP13.04□□□□□ -0.32
PHACTR4-204ENST00000493669 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
PHACTR4-204ENST00000493669 GIGYF2Q6Y7W6 1299 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-204ENST00000493669 DBNLQ9UJU6 430 aaKnown RBP13.04□□□□□ -0.32
PHACTR4-204ENST00000493669 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
PHACTR4-204ENST00000493669 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 TOM1O60784 492 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 CYP2E1P05181 493 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 TMX3Q96JJ7 454 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 SNX14Q9Y5W7 946 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 SLIT2O94813 1529 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 CDHR2Q9BYE9 1310 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 ANKRD36CQ5JPF3 1778 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 FSD1Q9BTV5 496 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 BOLA2Q9H3K6 86 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 CCDC171Q6TFL3 1326 aa13.03□□□□□ -0.32
PHACTR4-204ENST00000493669 EYA2O00167 538 aa13.02□□□□□ -0.32
PHACTR4-204ENST00000493669 DDB1Q16531 1140 aa13.02□□□□□ -0.32
PHACTR4-204ENST00000493669 ATG9AQ7Z3C6 839 aa13.02□□□□□ -0.32
PHACTR4-204ENST00000493669 TM6SF1Q9BZW5 370 aa13.02□□□□□ -0.32
PHACTR4-204ENST00000493669 CHMP3Q9Y3E7 222 aa13.02□□□□□ -0.32
PHACTR4-204ENST00000493669 SPATA31A5Q5VU36 1347 aa13.02□□□□□ -0.32
PHACTR4-204ENST00000493669 SPATA31A7Q8IWB4 1347 aa13.02□□□□□ -0.32
PHACTR4-204ENST00000493669 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.33
PHACTR4-204ENST00000493669 MED23Q9ULK4 1368 aa13.02□□□□□ -0.33
PHACTR4-204ENST00000493669 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.33
PHACTR4-204ENST00000493669 GOLGA6L22H0YM25 854 aa13.02□□□□□ -0.33
PHACTR4-204ENST00000493669 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
PHACTR4-204ENST00000493669 HAUS7Q99871 368 aa13.02□□□□□ -0.33
PHACTR4-204ENST00000493669 JCADQ9P266 1359 aa13.01□□□□□ -0.33
PHACTR4-204ENST00000493669 NMIQ13287 307 aaPredicted RBP13.01□□□□□ -0.33
PHACTR4-204ENST00000493669 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
PHACTR4-204ENST00000493669 ZNF609O15014 1411 aa13.01□□□□□ -0.33
PHACTR4-204ENST00000493669 TRAK2O60296 914 aa13.01□□□□□ -0.33
PHACTR4-204ENST00000493669 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
PHACTR4-204ENST00000493669 SPEF2Q9C093 1822 aa13□□□□□ -0.33
PHACTR4-204ENST00000493669 CSF1RP07333 972 aa13□□□□□ -0.33
PHACTR4-204ENST00000493669 SSFA2P28290 1259 aa13□□□□□ -0.33
PHACTR4-204ENST00000493669 MAP4K1Q92918 833 aa13□□□□□ -0.33
PHACTR4-204ENST00000493669 DBNDD2Q9BQY9 259 aa13□□□□□ -0.33
PHACTR4-204ENST00000493669 RREB1Q92766 1687 aa13□□□□□ -0.33
PHACTR4-204ENST00000493669 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
PHACTR4-204ENST00000493669 NECTIN1Q15223 517 aa13□□□□□ -0.33
PHACTR4-204ENST00000493669 CCDC57Q2TAC2 916 aa13□□□□□ -0.33
PHACTR4-204ENST00000493669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13□□□□□ -0.33
PHACTR4-204ENST00000493669 TTC14Q96N46 770 aa13□□□□□ -0.33
PHACTR4-204ENST00000493669 ZKSCAN1P17029 563 aaPredicted RBP12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 PTH1RQ03431 593 aa12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 UPF3BQ9BZI7 483 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms