RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 LTBP3Q9NS15 1303 aa7.66□□□□□ -1.18
RTN4IP1-202ENST00000493619 H0YIN7 160 aa7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 POLRMTO00411 1230 aaKnown RBP7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 U2SURPO15042 1029 aaKnown RBP7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 SNRPA1P09661 255 aaKnown RBP7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 EIF5P55010 431 aaKnown RBP7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 ST5P78524 1137 aa7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 MTHFSDQ2M296 383 aaKnown RBP7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 RNF123Q5XPI4 1314 aa7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 TTLL6Q8N841 843 aa7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 MS4A4AQ96JQ5 239 aa7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 SLC4A9Q96Q91 983 aa7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 BRIP1Q9BX63 1249 aa7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 IBTKQ9P2D0 1353 aaPredicted RBP7.65□□□□□ -1.18
RTN4IP1-202ENST00000493619 RIC1Q4ADV7 1423 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 BTBD11A6QL63 1104 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 LMNB1P20700 586 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 RALBP1Q15311 655 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 CC2D1BQ5T0F9 858 aaKnown RBP7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 CC2D2BQ6DHV5 1058 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 KCNV2Q8TDN2 545 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 NYXQ9GZU5 481 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 RYDENQ9NUL5 291 aaKnown RBP7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 WDR70Q9NW82 654 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 BCS1LQ9Y276 419 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 LAMB4A4D0S4 1761 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 BCORQ6W2J9 1755 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 ARFGEF2Q9Y6D5 1785 aa7.64□□□□□ -1.19
RTN4IP1-202ENST00000493619 MAPK8IP3Q9UPT6 1336 aa7.63□□□□□ -1.19
RTN4IP1-202ENST00000493619 HMOX1P09601 288 aa7.63□□□□□ -1.19
RTN4IP1-202ENST00000493619 NEUROD2Q15784 382 aa7.63□□□□□ -1.19
RTN4IP1-202ENST00000493619 STYK1Q6J9G0 422 aa7.63□□□□□ -1.19
RTN4IP1-202ENST00000493619 ARHGAP27Q6ZUM4 889 aa7.63□□□□□ -1.19
RTN4IP1-202ENST00000493619 DNAJC10Q8IXB1 793 aa7.63□□□□□ -1.19
RTN4IP1-202ENST00000493619 SETDB2Q96T68 719 aa7.63□□□□□ -1.19
RTN4IP1-202ENST00000493619 RSPH6AQ9H0K4 717 aa7.63□□□□□ -1.19
RTN4IP1-202ENST00000493619 N4BP2Q86UW6 1770 aaPredicted RBP7.63□□□□□ -1.19
RTN4IP1-202ENST00000493619 ERVV-1B6SEH8 477 aa7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 NPHP1O15259 732 aa7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 SERPINB2P05120 415 aa7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 U2AF1L5P0DN76 240 aaPredicted RBP7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 DPEP1P16444 411 aa7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 PRKAR2BP31323 418 aa7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 U2AF1Q01081 240 aaKnown RBP eCLIP7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 TAF7Q15545 349 aaPredicted RBP7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 VARS2Q5ST30 1063 aaKnown RBP7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 USPL1Q5W0Q7 1092 aa7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 TPTE2Q6XPS3 522 aa7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 VPS33BQ9H267 617 aa7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 AFDNP55196 1824 aaKnown RBP7.62□□□□□ -1.19
RTN4IP1-202ENST00000493619 A0A0G2JLW4 131 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 IQCA1LA6NCM1 817 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 HSP90B1P14625 803 aaKnown RBP7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 PPP2R1AP30153 589 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 ALDH1B1P30837 517 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 NFIXQ14938 502 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 GPR153Q6NV75 609 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 AMIGO3Q86WK7 504 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 CNBD1Q8NA66 436 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 SMC1BQ8NDV3 1235 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 MASTLQ96GX5 879 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 TMX4Q9H1E5 349 aaPredicted RBP7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 LGR6Q9HBX8 967 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 PODXL2Q9NZ53 605 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 ZBTB1Q9Y2K1 713 aa7.61□□□□□ -1.19
RTN4IP1-202ENST00000493619 DICER1Q9UPY3 1922 aaKnown RBP7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 KIF3CO14782 793 aa7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 HOXB7P09629 217 aa7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 VEGFAP15692 232 aaPredicted RBP7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 KCNA3P22001 575 aa7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 CALD1Q05682 793 aaKnown RBP7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 DDR1Q08345 913 aa7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 HSP90AB3PQ58FF7 597 aa7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 DZIP3Q86Y13 1208 aaKnown RBP7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 RTKN2Q8IZC4 609 aa7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 IL17REQ8NFR9 667 aa7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 ZNF496Q96IT1 587 aaPredicted RBP7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 SBF1O95248 1867 aa7.6□□□□□ -1.19
RTN4IP1-202ENST00000493619 WDR90Q96KV7 1748 aa7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 KLRG2A4D1S0 409 aaPredicted RBP7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 GLTPD2A6NH11 291 aa7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 NPR1P16066 1061 aa7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 PARP10Q53GL7 1025 aa7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 C9orf131Q5VYM1 1079 aa7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 TMC4Q7Z404 712 aa7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 C2CD5Q86YS7 1000 aa7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 ZNF687Q8N1G0 1237 aa7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 RNF181Q9P0P0 153 aa7.59□□□□□ -1.19
RTN4IP1-202ENST00000493619 KDM3BQ7LBC6 1761 aa7.59□□□□□ -1.2
RTN4IP1-202ENST00000493619 FER1L6Q2WGJ9 1857 aa7.58□□□□□ -1.2
RTN4IP1-202ENST00000493619 SCN4AP35499 1836 aa7.58□□□□□ -1.2
RTN4IP1-202ENST00000493619 CANXP27824 592 aaKnown RBP7.58□□□□□ -1.2
RTN4IP1-202ENST00000493619 SLC39A6Q13433 755 aa7.58□□□□□ -1.2
RTN4IP1-202ENST00000493619 NFE2L2Q16236 605 aa7.58□□□□□ -1.2
RTN4IP1-202ENST00000493619 CCDC93Q567U6 631 aa7.58□□□□□ -1.2
RTN4IP1-202ENST00000493619 KIF6Q6ZMV9 814 aa7.58□□□□□ -1.2
RTN4IP1-202ENST00000493619 TAOK3Q9H2K8 898 aa7.58□□□□□ -1.2
RTN4IP1-202ENST00000493619 SRP68Q9UHB9 627 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms