RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 ZNF827Q17R98 1081 aa23.52■■□□□ 1.36
NECTIN3-211ENST00000493615 SSH3Q8TE77 659 aa23.52■■□□□ 1.36
NECTIN3-211ENST00000493615 HSP90AB3PQ58FF7 597 aa23.51■■□□□ 1.35
NECTIN3-211ENST00000493615 NLRP10Q86W26 655 aa23.51■■□□□ 1.35
NECTIN3-211ENST00000493615 SRGAP3O43295 1099 aa23.51■■□□□ 1.35
NECTIN3-211ENST00000493615 NUCB1Q02818 461 aa23.51■■□□□ 1.35
NECTIN3-211ENST00000493615 MTX1Q13505 466 aa23.51■■□□□ 1.35
NECTIN3-211ENST00000493615 POLA2Q14181 598 aa23.51■■□□□ 1.35
NECTIN3-211ENST00000493615 ZNF34Q8IZ26 560 aa23.51■■□□□ 1.35
NECTIN3-211ENST00000493615 HDAC5Q9UQL6 1122 aa23.51■■□□□ 1.35
NECTIN3-211ENST00000493615 RGS3P49796 1198 aa23.5■■□□□ 1.35
NECTIN3-211ENST00000493615 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
NECTIN3-211ENST00000493615 AK7Q96M32 723 aa23.5■■□□□ 1.35
NECTIN3-211ENST00000493615 RTCBQ9Y3I0 505 aaKnown RBP23.5■■□□□ 1.35
NECTIN3-211ENST00000493615 UBN2Q6ZU65 1347 aa23.5■■□□□ 1.35
NECTIN3-211ENST00000493615 ANKRD45Q5TZF3 282 aa23.49■■□□□ 1.35
NECTIN3-211ENST00000493615 AKT1S1Q96B36 256 aa23.49■■□□□ 1.35
NECTIN3-211ENST00000493615 STK32BQ9NY57 414 aa23.48■■□□□ 1.35
NECTIN3-211ENST00000493615 TFCP2L1Q9NZI6 479 aa23.48■■□□□ 1.35
NECTIN3-211ENST00000493615 NUP98P52948 1817 aa23.48■■□□□ 1.35
NECTIN3-211ENST00000493615 SLC15A2Q16348 729 aa23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 SYNE4Q8N205 404 aa23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 ARHGEF1Q92888 912 aaKnown RBP23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 FAM89AQ96GI7 184 aa23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 EXOC6BQ9Y2D4 811 aa23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 PDE4AP27815 886 aa23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 CHD1LQ86WJ1 897 aa23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 LNPKQ9C0E8 428 aa23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 BCL2L12Q9HB09 334 aa23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 SRP68Q9UHB9 627 aaKnown RBP23.47■■□□□ 1.35
NECTIN3-211ENST00000493615 APBB1O00213 710 aa23.46■■□□□ 1.35
NECTIN3-211ENST00000493615 PHF14O94880 888 aa23.46■■□□□ 1.35
NECTIN3-211ENST00000493615 PCCAP05165 728 aaPredicted RBP23.46■■□□□ 1.35
NECTIN3-211ENST00000493615 HMGB2P26583 209 aaKnown RBP23.46■■□□□ 1.35
NECTIN3-211ENST00000493615 FOXO4P98177 505 aa23.46■■□□□ 1.35
NECTIN3-211ENST00000493615 ZBTB38Q8NAP3 1195 aaPredicted RBP23.46■■□□□ 1.35
NECTIN3-211ENST00000493615 RABL6Q3YEC7 729 aaPredicted RBP23.45■■□□□ 1.35
NECTIN3-211ENST00000493615 NARFQ9UHQ1 456 aa23.45■■□□□ 1.35
NECTIN3-211ENST00000493615 USPL1Q5W0Q7 1092 aa23.45■■□□□ 1.34
NECTIN3-211ENST00000493615 CLEC4GQ6UXB4 293 aa23.44■■□□□ 1.34
NECTIN3-211ENST00000493615 TUBGCP6Q96RT7 1819 aa23.44■■□□□ 1.34
NECTIN3-211ENST00000493615 TRAPPC3LQ5T215 181 aa23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 SUSD4Q5VX71 490 aa23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 TRMT112Q9UI30 125 aaKnown RBP23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 NIP7Q9Y221 180 aaKnown RBP eCLIP23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 ANKRD36CQ5JPF3 1778 aa23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 UBR3Q6ZT12 1888 aa23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 SMARCA5O60264 1052 aaPredicted RBP23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 R3HDM1Q15032 1099 aaKnown RBP23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 PA2G4Q9UQ80 394 aaKnown RBP23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 ZNF652Q9Y2D9 606 aa23.43■■□□□ 1.34
NECTIN3-211ENST00000493615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.42■■□□□ 1.34
NECTIN3-211ENST00000493615 SURF6O75683 361 aaKnown RBP23.42■■□□□ 1.34
NECTIN3-211ENST00000493615 LMBR1LQ6UX01 489 aa23.42■■□□□ 1.34
NECTIN3-211ENST00000493615 PSDA5PKW4 1024 aaPredicted RBP23.41■■□□□ 1.34
NECTIN3-211ENST00000493615 FAM177BA6PVY3 158 aa23.41■■□□□ 1.34
NECTIN3-211ENST00000493615 ZPR1O75312 459 aa23.41■■□□□ 1.34
NECTIN3-211ENST00000493615 BCORQ6W2J9 1755 aa23.41■■□□□ 1.34
NECTIN3-211ENST00000493615 BCL11AQ9H165 835 aa23.41■■□□□ 1.34
NECTIN3-211ENST00000493615 USP42Q9H9J4 1324 aaKnown RBP23.4■■□□□ 1.34
NECTIN3-211ENST00000493615 MSH5O43196 834 aa23.4■■□□□ 1.34
NECTIN3-211ENST00000493615 RFC4P35249 363 aa23.4■■□□□ 1.34
NECTIN3-211ENST00000493615 TBC1D9BQ66K14 1250 aa23.4■■□□□ 1.34
NECTIN3-211ENST00000493615 KLHDC4Q8TBB5 520 aa23.4■■□□□ 1.34
NECTIN3-211ENST00000493615 RGL2O15211 777 aa23.39■■□□□ 1.34
NECTIN3-211ENST00000493615 PARP10Q53GL7 1025 aa23.39■■□□□ 1.34
NECTIN3-211ENST00000493615 C16orf71Q8IYS4 520 aaPredicted RBP23.39■■□□□ 1.34
NECTIN3-211ENST00000493615 PDGFDQ9GZP0 370 aaPredicted RBP23.39■■□□□ 1.34
NECTIN3-211ENST00000493615 NOP58Q9Y2X3 529 aaKnown RBP23.39■■□□□ 1.34
NECTIN3-211ENST00000493615 PNPLA7Q6ZV29 1317 aa23.39■■□□□ 1.33
NECTIN3-211ENST00000493615 CDHR2Q9BYE9 1310 aa23.39■■□□□ 1.33
NECTIN3-211ENST00000493615 ADRA2BP18089 450 aa23.39■■□□□ 1.33
NECTIN3-211ENST00000493615 RFX5P48382 616 aaPredicted RBP23.39■■□□□ 1.33
NECTIN3-211ENST00000493615 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.33
NECTIN3-211ENST00000493615 COL23A1Q86Y22 540 aaPredicted RBP23.39■■□□□ 1.33
NECTIN3-211ENST00000493615 IRS4O14654 1257 aaPredicted RBP23.38■■□□□ 1.33
NECTIN3-211ENST00000493615 UTP14AQ9BVJ6 771 aaKnown RBP23.38■■□□□ 1.33
NECTIN3-211ENST00000493615 PLA2G12BQ9BX93 195 aa23.38■■□□□ 1.33
NECTIN3-211ENST00000493615 SCN7AQ01118 1682 aa23.38■■□□□ 1.33
NECTIN3-211ENST00000493615 NTSR2O95665 410 aa23.37■■□□□ 1.33
NECTIN3-211ENST00000493615 SSFA2P28290 1259 aa23.37■■□□□ 1.33
NECTIN3-211ENST00000493615 OTUD7AQ8TE49 926 aaPredicted RBP23.36■■□□□ 1.33
NECTIN3-211ENST00000493615 LRRCC1Q9C099 1032 aa23.36■■□□□ 1.33
NECTIN3-211ENST00000493615 CHMP3Q9Y3E7 222 aa23.36■■□□□ 1.33
NECTIN3-211ENST00000493615 PTPN12Q05209 780 aaKnown RBP23.36■■□□□ 1.33
NECTIN3-211ENST00000493615 C4AP0C0L4 1744 aa23.35■■□□□ 1.33
NECTIN3-211ENST00000493615 NUTM1Q86Y26 1132 aa23.35■■□□□ 1.33
NECTIN3-211ENST00000493615 SH3TC1Q8TE82 1336 aa23.35■■□□□ 1.33
NECTIN3-211ENST00000493615 RAB11FIP3O75154 756 aa23.34■■□□□ 1.33
NECTIN3-211ENST00000493615 CSF1RP07333 972 aa23.34■■□□□ 1.33
NECTIN3-211ENST00000493615 HCLS1P14317 486 aaPredicted RBP23.34■■□□□ 1.33
NECTIN3-211ENST00000493615 SIL1Q9H173 461 aa23.34■■□□□ 1.33
NECTIN3-211ENST00000493615 FLAD1Q8NFF5 587 aa23.34■■□□□ 1.33
NECTIN3-211ENST00000493615 RHPN1Q8TCX5 695 aa23.34■■□□□ 1.33
NECTIN3-211ENST00000493615 CCDC85AQ96PX6 553 aaPredicted RBP23.34■■□□□ 1.33
NECTIN3-211ENST00000493615 COPRSQ9NQ92 184 aa23.34■■□□□ 1.33
NECTIN3-211ENST00000493615 ZBTB47Q9UFB7 747 aaPredicted RBP23.34■■□□□ 1.33
NECTIN3-211ENST00000493615 QSER1Q2KHR3 1735 aa23.33■■□□□ 1.33
NECTIN3-211ENST00000493615 TTLL11Q8NHH1 800 aa23.33■■□□□ 1.33
NECTIN3-211ENST00000493615 IL1RAPL2Q9NP60 686 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms