RNA–Protein interactions for RNA: ENST00000493542.1

TCN2-207, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-207ENST00000493542 NUP98P52948 1817 aa12.37□□□□□ -0.43
TCN2-207ENST00000493542 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
TCN2-207ENST00000493542 CCER2I3L3R5 266 aa12.36□□□□□ -0.43
TCN2-207ENST00000493542 TRAF5O00463 557 aa12.36□□□□□ -0.43
TCN2-207ENST00000493542 NBPF10Q6P3W6 841 aaKnown RBP12.36□□□□□ -0.43
TCN2-207ENST00000493542 NBPF5PQ86XG9 351 aaPredicted RBP12.36□□□□□ -0.43
TCN2-207ENST00000493542 RTKN2Q8IZC4 609 aa12.36□□□□□ -0.43
TCN2-207ENST00000493542 NBPF15Q8N660 670 aa12.36□□□□□ -0.43
TCN2-207ENST00000493542 THSD7BQ9C0I4 1608 aa12.36□□□□□ -0.43
TCN2-207ENST00000493542 TNRC18O15417 2968 aaPredicted RBP12.36□□□□□ -0.43
TCN2-207ENST00000493542 KLRG2A4D1S0 409 aaPredicted RBP12.35□□□□□ -0.43
TCN2-207ENST00000493542 MAP2K2P36507 400 aa12.35□□□□□ -0.43
TCN2-207ENST00000493542 DGKZQ13574 1117 aa12.35□□□□□ -0.43
TCN2-207ENST00000493542 CLEC4GQ6UXB4 293 aa12.35□□□□□ -0.43
TCN2-207ENST00000493542 MCM10Q7L590 875 aa12.35□□□□□ -0.43
TCN2-207ENST00000493542 PNISRQ8TF01 805 aaKnown RBP12.35□□□□□ -0.43
TCN2-207ENST00000493542 TLL2Q9Y6L7 1015 aa12.35□□□□□ -0.43
TCN2-207ENST00000493542 SNED1Q8TER0 1413 aa12.35□□□□□ -0.43
TCN2-207ENST00000493542 SNRPA1P09661 255 aaKnown RBP12.34□□□□□ -0.43
TCN2-207ENST00000493542 LMOD1P29536 600 aaPredicted RBP12.34□□□□□ -0.43
TCN2-207ENST00000493542 EPS15P42566 896 aa12.34□□□□□ -0.43
TCN2-207ENST00000493542 EIF6P56537 245 aaKnown RBP12.34□□□□□ -0.43
TCN2-207ENST00000493542 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
TCN2-207ENST00000493542 JDP2Q8WYK2 163 aa12.34□□□□□ -0.43
TCN2-207ENST00000493542 RGL2O15211 777 aa12.33□□□□□ -0.44
TCN2-207ENST00000493542 LTBP1Q14766 1721 aa12.33□□□□□ -0.44
TCN2-207ENST00000493542 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
TCN2-207ENST00000493542 CA12O43570 354 aa12.32□□□□□ -0.44
TCN2-207ENST00000493542 SCNN1DP51172 638 aa12.32□□□□□ -0.44
TCN2-207ENST00000493542 CFAP53Q96M91 514 aa12.32□□□□□ -0.44
TCN2-207ENST00000493542 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
TCN2-207ENST00000493542 U2AF1L5P0DN76 240 aaPredicted RBP12.31□□□□□ -0.44
TCN2-207ENST00000493542 ALDH1B1P30837 517 aa12.31□□□□□ -0.44
TCN2-207ENST00000493542 U2AF1Q01081 240 aaKnown RBP eCLIP12.31□□□□□ -0.44
TCN2-207ENST00000493542 HLFQ16534 295 aa12.31□□□□□ -0.44
TCN2-207ENST00000493542 TPTE2Q6XPS3 522 aa12.31□□□□□ -0.44
TCN2-207ENST00000493542 USP50Q70EL3 339 aaPredicted RBP12.31□□□□□ -0.44
TCN2-207ENST00000493542 SAPCD2Q86UD0 394 aa12.31□□□□□ -0.44
TCN2-207ENST00000493542 NUDCQ9Y266 331 aa12.31□□□□□ -0.44
TCN2-207ENST00000493542 COL4A5P29400 1685 aa12.3□□□□□ -0.44
TCN2-207ENST00000493542 CELF2O95319 508 aaKnown RBP12.3□□□□□ -0.44
TCN2-207ENST00000493542 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
TCN2-207ENST00000493542 SOX10P56693 466 aa12.3□□□□□ -0.44
TCN2-207ENST00000493542 CIAPIN1Q6FI81 312 aa12.3□□□□□ -0.44
TCN2-207ENST00000493542 RTF1Q92541 710 aaKnown RBP12.3□□□□□ -0.44
TCN2-207ENST00000493542 PSMD1Q99460 953 aa12.3□□□□□ -0.44
TCN2-207ENST00000493542 NIP7Q9Y221 180 aaKnown RBP eCLIP12.3□□□□□ -0.44
TCN2-207ENST00000493542 ZNF652Q9Y2D9 606 aa12.3□□□□□ -0.44
TCN2-207ENST00000493542 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
TCN2-207ENST00000493542 CASP8AP2Q9UKL3 1982 aa12.29□□□□□ -0.44
TCN2-207ENST00000493542 LARGE2Q8N3Y3 721 aa12.29□□□□□ -0.44
TCN2-207ENST00000493542 PLEKHF1Q96S99 279 aa12.29□□□□□ -0.44
TCN2-207ENST00000493542 MIS18AQ9NYP9 233 aa12.29□□□□□ -0.44
TCN2-207ENST00000493542 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
TCN2-207ENST00000493542 CRY2Q49AN0 593 aa12.28□□□□□ -0.44
TCN2-207ENST00000493542 ADAMTS8Q9UP79 889 aa12.28□□□□□ -0.44
TCN2-207ENST00000493542 GTF2E1P29083 439 aaPredicted RBP12.27□□□□□ -0.45
TCN2-207ENST00000493542 ZIC5Q96T25 663 aa12.27□□□□□ -0.45
TCN2-207ENST00000493542 GLIS2Q9BZE0 524 aaPredicted RBP12.27□□□□□ -0.45
TCN2-207ENST00000493542 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
TCN2-207ENST00000493542 MRS2Q9HD23 443 aa12.27□□□□□ -0.45
TCN2-207ENST00000493542 ADARB2Q9NS39 739 aaKnown RBP12.27□□□□□ -0.45
TCN2-207ENST00000493542 TRPM7Q96QT4 1865 aa12.27□□□□□ -0.45
TCN2-207ENST00000493542 RIC1Q4ADV7 1423 aa12.27□□□□□ -0.45
TCN2-207ENST00000493542 LAMB2P55268 1798 aa12.26□□□□□ -0.45
TCN2-207ENST00000493542 TCERG1O14776 1098 aaKnown RBP12.26□□□□□ -0.45
TCN2-207ENST00000493542 PRPF38BQ5VTL8 546 aaKnown RBP12.26□□□□□ -0.45
TCN2-207ENST00000493542 CC2D2BQ6DHV5 1058 aa12.26□□□□□ -0.45
TCN2-207ENST00000493542 SLC51AQ86UW1 340 aa12.26□□□□□ -0.45
TCN2-207ENST00000493542 HHIPL1Q96JK4 782 aa12.26□□□□□ -0.45
TCN2-207ENST00000493542 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
TCN2-207ENST00000493542 ERVV-1B6SEH8 477 aa12.25□□□□□ -0.45
TCN2-207ENST00000493542 EIF4A1P60842 406 aaKnown RBP12.25□□□□□ -0.45
TCN2-207ENST00000493542 TTLL7Q6ZT98 887 aa12.25□□□□□ -0.45
TCN2-207ENST00000493542 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
TCN2-207ENST00000493542 NIM1KQ8IY84 436 aa12.25□□□□□ -0.45
TCN2-207ENST00000493542 GPRC5DQ9NZD1 345 aa12.25□□□□□ -0.45
TCN2-207ENST00000493542 MAP3K15Q6ZN16 1313 aa12.25□□□□□ -0.45
TCN2-207ENST00000493542 UBN2Q6ZU65 1347 aa12.25□□□□□ -0.45
TCN2-207ENST00000493542 IBTKQ9P2D0 1353 aaPredicted RBP12.25□□□□□ -0.45
TCN2-207ENST00000493542 PDE4DIPQ5VU43 2346 aa12.25□□□□□ -0.45
TCN2-207ENST00000493542 NOGQ13253 232 aa12.24□□□□□ -0.45
TCN2-207ENST00000493542 THUMPD2Q9BTF0 503 aaKnown RBP12.24□□□□□ -0.45
TCN2-207ENST00000493542 PPIP5K2O43314 1243 aa12.23□□□□□ -0.45
TCN2-207ENST00000493542 HOXA10P31260 410 aaPredicted RBP12.23□□□□□ -0.45
TCN2-207ENST00000493542 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
TCN2-207ENST00000493542 ZNF34Q8IZ26 560 aa12.23□□□□□ -0.45
TCN2-207ENST00000493542 NGEFQ8N5V2 710 aa12.23□□□□□ -0.45
TCN2-207ENST00000493542 RPGRQ92834 1020 aaKnown RBP12.23□□□□□ -0.45
TCN2-207ENST00000493542 GMPSP49915 693 aaPredicted RBP12.22□□□□□ -0.45
TCN2-207ENST00000493542 HIRAP54198 1017 aaPredicted RBP12.22□□□□□ -0.45
TCN2-207ENST00000493542 HUNKP57058 714 aa12.22□□□□□ -0.45
TCN2-207ENST00000493542 CXCL9Q07325 125 aa12.22□□□□□ -0.45
TCN2-207ENST00000493542 AOC3Q16853 763 aa12.22□□□□□ -0.45
TCN2-207ENST00000493542 GRIPAP1Q4V328 841 aa12.22□□□□□ -0.45
TCN2-207ENST00000493542 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
TCN2-207ENST00000493542 C3orf67Q6ZVT6 689 aa12.22□□□□□ -0.45
TCN2-207ENST00000493542 NYXQ9GZU5 481 aa12.22□□□□□ -0.45
TCN2-207ENST00000493542 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
TCN2-207ENST00000493542 RRP7AQ9Y3A4 280 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms