RNA–Protein interactions for RNA: ENST00000493502.3

SSPO-210, Transcript of SCO-spondin, humanhuman

TSL 5

Gene SSPO, Length 646 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-210ENST00000493502 GJA3Q9Y6H8 435 aa18.72■□□□□ 0.59
SSPO-210ENST00000493502 NPC1L1Q9UHC9 1359 aa18.71■□□□□ 0.59
SSPO-210ENST00000493502 TRAF5O00463 557 aa18.71■□□□□ 0.59
SSPO-210ENST00000493502 EIF6P56537 245 aaKnown RBP18.71■□□□□ 0.59
SSPO-210ENST00000493502 MLLT1Q03111 559 aaPredicted RBP18.71■□□□□ 0.59
SSPO-210ENST00000493502 GPR101Q96P66 508 aaPredicted RBP18.71■□□□□ 0.59
SSPO-210ENST00000493502 LMOD1P29536 600 aaPredicted RBP18.7■□□□□ 0.58
SSPO-210ENST00000493502 ECE1P42892 770 aa18.7■□□□□ 0.58
SSPO-210ENST00000493502 RIC1Q4ADV7 1423 aa18.7■□□□□ 0.58
SSPO-210ENST00000493502 PAXIP1Q6ZW49 1069 aaPredicted RBP18.7■□□□□ 0.58
SSPO-210ENST00000493502 TLL2Q9Y6L7 1015 aa18.7■□□□□ 0.58
SSPO-210ENST00000493502 TNRC18O15417 2968 aaPredicted RBP18.7■□□□□ 0.58
SSPO-210ENST00000493502 GRM1Q13255 1194 aa18.69■□□□□ 0.58
SSPO-210ENST00000493502 CC2D2BQ6DHV5 1058 aa18.69■□□□□ 0.58
SSPO-210ENST00000493502 MCM10Q7L590 875 aa18.69■□□□□ 0.58
SSPO-210ENST00000493502 NUTM1Q86Y26 1132 aa18.69■□□□□ 0.58
SSPO-210ENST00000493502 TSKSQ9UJT2 592 aa18.69■□□□□ 0.58
SSPO-210ENST00000493502 NUP98P52948 1817 aa18.69■□□□□ 0.58
SSPO-210ENST00000493502 HOXA10P31260 410 aaPredicted RBP18.68■□□□□ 0.58
SSPO-210ENST00000493502 USP50Q70EL3 339 aaPredicted RBP18.68■□□□□ 0.58
SSPO-210ENST00000493502 BEGAINQ9BUH8 593 aa18.68■□□□□ 0.58
SSPO-210ENST00000493502 AOC2O75106 756 aa18.67■□□□□ 0.58
SSPO-210ENST00000493502 GTF2E1P29083 439 aaPredicted RBP18.67■□□□□ 0.58
SSPO-210ENST00000493502 MAP2K2P36507 400 aa18.66■□□□□ 0.58
SSPO-210ENST00000493502 LARGE2Q8N3Y3 721 aa18.66■□□□□ 0.58
SSPO-210ENST00000493502 NYXQ9GZU5 481 aa18.66■□□□□ 0.58
SSPO-210ENST00000493502 IBTKQ9P2D0 1353 aaPredicted RBP18.66■□□□□ 0.58
SSPO-210ENST00000493502 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
SSPO-210ENST00000493502 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
SSPO-210ENST00000493502 UBN2Q6ZU65 1347 aa18.65■□□□□ 0.58
SSPO-210ENST00000493502 KDM3BQ7LBC6 1761 aa18.64■□□□□ 0.57
SSPO-210ENST00000493502 GRIPAP1Q4V328 841 aa18.64■□□□□ 0.57
SSPO-210ENST00000493502 SAPCD2Q86UD0 394 aa18.64■□□□□ 0.57
SSPO-210ENST00000493502 RTF1Q92541 710 aaKnown RBP18.64■□□□□ 0.57
SSPO-210ENST00000493502 MCOLN1Q9GZU1 580 aa18.64■□□□□ 0.57
SSPO-210ENST00000493502 CASP8AP2Q9UKL3 1982 aa18.63■□□□□ 0.57
SSPO-210ENST00000493502 ERVV-1B6SEH8 477 aa18.63■□□□□ 0.57
SSPO-210ENST00000493502 C3orf67Q6ZVT6 689 aa18.63■□□□□ 0.57
SSPO-210ENST00000493502 RPGRQ92834 1020 aaKnown RBP18.63■□□□□ 0.57
SSPO-210ENST00000493502 GPRC5DQ9NZD1 345 aa18.63■□□□□ 0.57
SSPO-210ENST00000493502 MAP3K15Q6ZN16 1313 aa18.63■□□□□ 0.57
SSPO-210ENST00000493502 PPEF1O14829 653 aaPredicted RBP18.62■□□□□ 0.57
SSPO-210ENST00000493502 NIM1KQ8IY84 436 aa18.62■□□□□ 0.57
SSPO-210ENST00000493502 CRAMP1Q96RY5 1269 aa18.62■□□□□ 0.57
SSPO-210ENST00000493502 ADARB2Q9NS39 739 aaKnown RBP18.62■□□□□ 0.57
SSPO-210ENST00000493502 TTLL7Q6ZT98 887 aa18.61■□□□□ 0.57
SSPO-210ENST00000493502 PCDH10Q9P2E7 1040 aa18.61■□□□□ 0.57
SSPO-210ENST00000493502 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
SSPO-210ENST00000493502 PPIP5K2O43314 1243 aa18.6■□□□□ 0.57
SSPO-210ENST00000493502 CA12O43570 354 aa18.6■□□□□ 0.57
SSPO-210ENST00000493502 CELF2O95319 508 aaKnown RBP18.6■□□□□ 0.57
SSPO-210ENST00000493502 GPTP24298 496 aa18.6■□□□□ 0.57
SSPO-210ENST00000493502 BRPF1P55201 1214 aaPredicted RBP18.6■□□□□ 0.57
SSPO-210ENST00000493502 AOC3Q16853 763 aa18.6■□□□□ 0.57
SSPO-210ENST00000493502 SUSD4Q5VX71 490 aa18.6■□□□□ 0.57
SSPO-210ENST00000493502 NGEFQ8N5V2 710 aa18.6■□□□□ 0.57
SSPO-210ENST00000493502 HHIPL1Q96JK4 782 aa18.6■□□□□ 0.57
SSPO-210ENST00000493502 GLIS2Q9BZE0 524 aaPredicted RBP18.6■□□□□ 0.57
SSPO-210ENST00000493502 MIS18AQ9NYP9 233 aa18.6■□□□□ 0.57
SSPO-210ENST00000493502 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
SSPO-210ENST00000493502 NTSR2O95665 410 aa18.59■□□□□ 0.57
SSPO-210ENST00000493502 CXCL9Q07325 125 aa18.59■□□□□ 0.57
SSPO-210ENST00000493502 TAF7Q15545 349 aaPredicted RBP18.59■□□□□ 0.57
SSPO-210ENST00000493502 RBM17Q96I25 401 aaKnown RBP18.59■□□□□ 0.57
SSPO-210ENST00000493502 PGAP2Q9UHJ9 254 aa18.59■□□□□ 0.57
SSPO-210ENST00000493502 ZNF34Q8IZ26 560 aa18.58■□□□□ 0.56
SSPO-210ENST00000493502 CFAP53Q96M91 514 aa18.58■□□□□ 0.56
SSPO-210ENST00000493502 ZBTB3Q9H5J0 574 aa18.58■□□□□ 0.56
SSPO-210ENST00000493502 PDE4DIPQ5VU43 2346 aa18.57■□□□□ 0.56
SSPO-210ENST00000493502 U2AF1L5P0DN76 240 aaPredicted RBP18.57■□□□□ 0.56
SSPO-210ENST00000493502 GMPSP49915 693 aaPredicted RBP18.57■□□□□ 0.56
SSPO-210ENST00000493502 U2AF1Q01081 240 aaKnown RBP eCLIP18.57■□□□□ 0.56
SSPO-210ENST00000493502 KIF6Q6ZMV9 814 aa18.57■□□□□ 0.56
SSPO-210ENST00000493502 CFAP44Q96MT7 982 aa18.57■□□□□ 0.56
SSPO-210ENST00000493502 ATP6V0A2Q9Y487 856 aa18.57■□□□□ 0.56
SSPO-210ENST00000493502 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
SSPO-210ENST00000493502 HIRAP54198 1017 aaPredicted RBP18.56■□□□□ 0.56
SSPO-210ENST00000493502 CIAPIN1Q6FI81 312 aa18.56■□□□□ 0.56
SSPO-210ENST00000493502 ZIC5Q96T25 663 aa18.56■□□□□ 0.56
SSPO-210ENST00000493502 RTFDC1Q9BY42 306 aaPredicted RBP18.56■□□□□ 0.56
SSPO-210ENST00000493502 VPS33BQ9H267 617 aa18.56■□□□□ 0.56
SSPO-210ENST00000493502 ZNRF3Q9ULT6 936 aa18.56■□□□□ 0.56
SSPO-210ENST00000493502 NUDCQ9Y266 331 aa18.56■□□□□ 0.56
SSPO-210ENST00000493502 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
SSPO-210ENST00000493502 LAMB2P55268 1798 aa18.55■□□□□ 0.56
SSPO-210ENST00000493502 CDHR2Q9BYE9 1310 aa18.55■□□□□ 0.56
SSPO-210ENST00000493502 DGKZQ13574 1117 aa18.55■□□□□ 0.56
SSPO-210ENST00000493502 ABCC4O15439 1325 aa18.54■□□□□ 0.56
SSPO-210ENST00000493502 MYL6BP14649 208 aa18.54■□□□□ 0.56
SSPO-210ENST00000493502 EIF4A1P60842 406 aaKnown RBP18.54■□□□□ 0.56
SSPO-210ENST00000493502 TRPM4Q8TD43 1214 aa18.54■□□□□ 0.56
SSPO-210ENST00000493502 ZC3H15Q8WU90 426 aaKnown RBP18.54■□□□□ 0.56
SSPO-210ENST00000493502 ZNF408Q9H9D4 720 aa18.54■□□□□ 0.56
SSPO-210ENST00000493502 DUOX1Q9NRD9 1551 aa18.54■□□□□ 0.56
SSPO-210ENST00000493502 GIGYF2Q6Y7W6 1299 aaKnown RBP18.53■□□□□ 0.56
SSPO-210ENST00000493502 SHTN1A0MZ66 631 aa18.52■□□□□ 0.56
SSPO-210ENST00000493502 KIAA2012Q0VF49 1180 aa18.52■□□□□ 0.56
SSPO-210ENST00000493502 NOGQ13253 232 aa18.52■□□□□ 0.56
SSPO-210ENST00000493502 NLRP3Q96P20 1036 aa18.52■□□□□ 0.56
SSPO-210ENST00000493502 ANKRD36CQ5JPF3 1778 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms