RNA–Protein interactions for RNA: ENST00000493085.5

GPM6B-209, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-209ENST00000493085 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
GPM6B-209ENST00000493085 SBF1O95248 1867 aa13.44□□□□□ -0.26
GPM6B-209ENST00000493085 RNF123Q5XPI4 1314 aa13.44□□□□□ -0.26
GPM6B-209ENST00000493085 CACNA1FO60840 1977 aa13.44□□□□□ -0.26
GPM6B-209ENST00000493085 TCERG1O14776 1098 aaKnown RBP13.44□□□□□ -0.26
GPM6B-209ENST00000493085 C21orf2O43822 256 aa13.44□□□□□ -0.26
GPM6B-209ENST00000493085 DDX58O95786 925 aaKnown RBP13.44□□□□□ -0.26
GPM6B-209ENST00000493085 EXOSC9Q06265 439 aaKnown RBP13.44□□□□□ -0.26
GPM6B-209ENST00000493085 PRPF40BQ6NWY9 871 aaKnown RBP13.44□□□□□ -0.26
GPM6B-209ENST00000493085 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
GPM6B-209ENST00000493085 RIC1Q4ADV7 1423 aa13.44□□□□□ -0.26
GPM6B-209ENST00000493085 ADCY9O60503 1353 aa13.44□□□□□ -0.26
GPM6B-209ENST00000493085 RASSF7Q02833 373 aa13.43□□□□□ -0.26
GPM6B-209ENST00000493085 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
GPM6B-209ENST00000493085 ISCA1Q9BUE6 129 aa13.43□□□□□ -0.26
GPM6B-209ENST00000493085 TRMT112Q9UI30 125 aaKnown RBP13.43□□□□□ -0.26
GPM6B-209ENST00000493085 ZNF521Q96K83 1311 aa13.42□□□□□ -0.26
GPM6B-209ENST00000493085 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
GPM6B-209ENST00000493085 ATP5J2-PTCD1G3V325 749 aa13.42□□□□□ -0.26
GPM6B-209ENST00000493085 ALDH1B1P30837 517 aa13.42□□□□□ -0.26
GPM6B-209ENST00000493085 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
GPM6B-209ENST00000493085 RPGRQ92834 1020 aaKnown RBP13.42□□□□□ -0.26
GPM6B-209ENST00000493085 NLRP3Q96P20 1036 aa13.42□□□□□ -0.26
GPM6B-209ENST00000493085 RNF181Q9P0P0 153 aa13.42□□□□□ -0.26
GPM6B-209ENST00000493085 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
GPM6B-209ENST00000493085 SH3TC1Q8TE82 1336 aa13.41□□□□□ -0.26
GPM6B-209ENST00000493085 VAMP4O75379 141 aa13.41□□□□□ -0.26
GPM6B-209ENST00000493085 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
GPM6B-209ENST00000493085 SLC10A5Q5PT55 438 aa13.41□□□□□ -0.26
GPM6B-209ENST00000493085 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
GPM6B-209ENST00000493085 MIER1Q8N108 512 aa13.41□□□□□ -0.26
GPM6B-209ENST00000493085 ZNF428Q96B54 188 aa13.41□□□□□ -0.26
GPM6B-209ENST00000493085 MYD88Q99836 296 aa13.41□□□□□ -0.26
GPM6B-209ENST00000493085 NFKBIEO00221 500 aa13.4□□□□□ -0.26
GPM6B-209ENST00000493085 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
GPM6B-209ENST00000493085 TRIM28Q13263 835 aaKnown RBP13.4□□□□□ -0.26
GPM6B-209ENST00000493085 ZNF526Q8TF50 670 aaPredicted RBP13.4□□□□□ -0.26
GPM6B-209ENST00000493085 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.26
GPM6B-209ENST00000493085 LAMB2P55268 1798 aa13.4□□□□□ -0.26
GPM6B-209ENST00000493085 PI4KAP2A4QPH2 592 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 E9PSI1 815 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 LMNB1P20700 586 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 CCDC93Q567U6 631 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 G2E3Q7L622 706 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 PI4KAP1Q8N8J0 262 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 METTL22Q9BUU2 404 aaPredicted RBP13.39□□□□□ -0.27
GPM6B-209ENST00000493085 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
GPM6B-209ENST00000493085 MAP3K2Q9Y2U5 619 aa13.39□□□□□ -0.27
GPM6B-209ENST00000493085 HOXA10P31260 410 aaPredicted RBP13.38□□□□□ -0.27
GPM6B-209ENST00000493085 FLIIQ13045 1269 aa13.38□□□□□ -0.27
GPM6B-209ENST00000493085 RTL5Q5HYW3 569 aaPredicted RBP13.38□□□□□ -0.27
GPM6B-209ENST00000493085 CCDC191Q8NCU4 936 aa13.38□□□□□ -0.27
GPM6B-209ENST00000493085 C7orf43Q8WVR3 580 aa13.38□□□□□ -0.27
GPM6B-209ENST00000493085 FAM89AQ96GI7 184 aa13.38□□□□□ -0.27
GPM6B-209ENST00000493085 CRAMP1Q96RY5 1269 aa13.38□□□□□ -0.27
GPM6B-209ENST00000493085 TAOK3Q9H2K8 898 aa13.38□□□□□ -0.27
GPM6B-209ENST00000493085 DDX60Q8IY21 1712 aaKnown RBP13.38□□□□□ -0.27
GPM6B-209ENST00000493085 PRELPP51888 382 aa13.37□□□□□ -0.27
GPM6B-209ENST00000493085 NEXNQ0ZGT2 675 aa13.37□□□□□ -0.27
GPM6B-209ENST00000493085 FKBP5Q13451 457 aaPredicted RBP13.37□□□□□ -0.27
GPM6B-209ENST00000493085 CWC25Q9NXE8 425 aaPredicted RBP13.37□□□□□ -0.27
GPM6B-209ENST00000493085 DICER1Q9UPY3 1922 aaKnown RBP13.37□□□□□ -0.27
GPM6B-209ENST00000493085 LTBP3Q9NS15 1303 aa13.37□□□□□ -0.27
GPM6B-209ENST00000493085 IRS4O14654 1257 aaPredicted RBP13.36□□□□□ -0.27
GPM6B-209ENST00000493085 SLFN5Q08AF3 891 aa13.36□□□□□ -0.27
GPM6B-209ENST00000493085 OLFM4Q6UX06 510 aa13.36□□□□□ -0.27
GPM6B-209ENST00000493085 RTKN2Q8IZC4 609 aa13.36□□□□□ -0.27
GPM6B-209ENST00000493085 ZBTB38Q8NAP3 1195 aaPredicted RBP13.36□□□□□ -0.27
GPM6B-209ENST00000493085 ZC3H4Q9UPT8 1303 aaKnown RBP13.36□□□□□ -0.27
GPM6B-209ENST00000493085 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
GPM6B-209ENST00000493085 PPEF1O14829 653 aaPredicted RBP13.35□□□□□ -0.27
GPM6B-209ENST00000493085 HSP90B1P14625 803 aaKnown RBP13.35□□□□□ -0.27
GPM6B-209ENST00000493085 CC2D2BQ6DHV5 1058 aa13.35□□□□□ -0.27
GPM6B-209ENST00000493085 DDX46Q7L014 1031 aaKnown RBP13.35□□□□□ -0.27
GPM6B-209ENST00000493085 ABCC4O15439 1325 aa13.35□□□□□ -0.27
GPM6B-209ENST00000493085 TAF1P21675 1872 aa13.34□□□□□ -0.27
GPM6B-209ENST00000493085 PCCAP05165 728 aaPredicted RBP13.34□□□□□ -0.27
GPM6B-209ENST00000493085 IGKV5-2P06315 115 aa13.34□□□□□ -0.27
GPM6B-209ENST00000493085 FKBP4Q02790 459 aaKnown RBP eCLIP13.34□□□□□ -0.27
GPM6B-209ENST00000493085 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
GPM6B-209ENST00000493085 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
GPM6B-209ENST00000493085 TMX4Q9H1E5 349 aaPredicted RBP13.34□□□□□ -0.27
GPM6B-209ENST00000493085 NEURL1BA8MQ27 555 aa13.33□□□□□ -0.28
GPM6B-209ENST00000493085 GRAPQ13588 217 aa13.33□□□□□ -0.28
GPM6B-209ENST00000493085 SF3B3Q15393 1217 aaKnown RBP13.33□□□□□ -0.28
GPM6B-209ENST00000493085 CWF19L2Q2TBE0 894 aaKnown RBP13.33□□□□□ -0.28
GPM6B-209ENST00000493085 GRIPAP1Q4V328 841 aa13.33□□□□□ -0.28
GPM6B-209ENST00000493085 GRAPLQ8TC17 118 aaPredicted RBP13.33□□□□□ -0.28
GPM6B-209ENST00000493085 JARID2Q92833 1246 aaPredicted RBP13.33□□□□□ -0.28
GPM6B-209ENST00000493085 KDM2BQ8NHM5 1336 aa13.33□□□□□ -0.28
GPM6B-209ENST00000493085 PDE8AO60658 829 aa13.32□□□□□ -0.28
GPM6B-209ENST00000493085 BBOX1O75936 387 aa13.32□□□□□ -0.28
GPM6B-209ENST00000493085 ZNF277Q9NRM2 450 aaPredicted RBP13.32□□□□□ -0.28
GPM6B-209ENST00000493085 ATP6V0A2Q9Y487 856 aa13.32□□□□□ -0.28
GPM6B-209ENST00000493085 SNED1Q8TER0 1413 aa13.31□□□□□ -0.28
GPM6B-209ENST00000493085 F6X3S4 739 aa13.31□□□□□ -0.28
GPM6B-209ENST00000493085 PSMD1Q99460 953 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms