RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
CCM2-217ENST00000492883 IBTKQ9P2D0 1353 aaPredicted RBP17.8■□□□□ 0.44
CCM2-217ENST00000492883 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
CCM2-217ENST00000492883 DALRD3Q5D0E6 543 aaKnown RBP17.8■□□□□ 0.44
CCM2-217ENST00000492883 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
CCM2-217ENST00000492883 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
CCM2-217ENST00000492883 ADCY9O60503 1353 aa17.79■□□□□ 0.44
CCM2-217ENST00000492883 SRCAPQ6ZRS2 3230 aa17.79■□□□□ 0.44
CCM2-217ENST00000492883 F6X3S4 739 aa17.79■□□□□ 0.44
CCM2-217ENST00000492883 GRIN3BO60391 1043 aa17.79■□□□□ 0.44
CCM2-217ENST00000492883 YBX3P16989 372 aaKnown RBP eCLIP17.79■□□□□ 0.442e-6■■□□□ 12.1
CCM2-217ENST00000492883 SLC10A5Q5PT55 438 aa17.79■□□□□ 0.44
CCM2-217ENST00000492883 FAM89AQ96GI7 184 aa17.79■□□□□ 0.44
CCM2-217ENST00000492883 NLRP3Q96P20 1036 aa17.79■□□□□ 0.44
CCM2-217ENST00000492883 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
CCM2-217ENST00000492883 SRGNP10124 158 aa17.78■□□□□ 0.44
CCM2-217ENST00000492883 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
CCM2-217ENST00000492883 SYNE4Q8N205 404 aa17.78■□□□□ 0.44
CCM2-217ENST00000492883 TTLL6Q8N841 843 aa17.78■□□□□ 0.44
CCM2-217ENST00000492883 MASTLQ96GX5 879 aa17.78■□□□□ 0.44
CCM2-217ENST00000492883 KLRG2A4D1S0 409 aaPredicted RBP17.77■□□□□ 0.44
CCM2-217ENST00000492883 IGKV5-2P06315 115 aa17.77■□□□□ 0.44
CCM2-217ENST00000492883 HCLS1P14317 486 aaPredicted RBP17.77■□□□□ 0.44
CCM2-217ENST00000492883 NPR1P16066 1061 aa17.77■□□□□ 0.44
CCM2-217ENST00000492883 RARSP54136 660 aaKnown RBP17.77■□□□□ 0.44
CCM2-217ENST00000492883 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.44
CCM2-217ENST00000492883 STYK1Q6J9G0 422 aa17.77■□□□□ 0.44
CCM2-217ENST00000492883 SLC4A10Q6U841 1118 aa17.77■□□□□ 0.44
CCM2-217ENST00000492883 ABCC12Q96J65 1359 aa17.77■□□□□ 0.43
CCM2-217ENST00000492883 NRXN2Q9P2S2 1712 aa17.76■□□□□ 0.43
CCM2-217ENST00000492883 NEURL1BA8MQ27 555 aa17.76■□□□□ 0.43
CCM2-217ENST00000492883 ZBTB38Q8NAP3 1195 aaPredicted RBP17.76■□□□□ 0.43
CCM2-217ENST00000492883 LINS1Q8NG48 757 aa17.76■□□□□ 0.43
CCM2-217ENST00000492883 RPGRQ92834 1020 aaKnown RBP17.76■□□□□ 0.43
CCM2-217ENST00000492883 CNKSR1Q969H4 720 aa17.76■□□□□ 0.43
CCM2-217ENST00000492883 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
CCM2-217ENST00000492883 PTPRCP08575 1304 aa17.75■□□□□ 0.43
CCM2-217ENST00000492883 IRS4O14654 1257 aaPredicted RBP17.75■□□□□ 0.43
CCM2-217ENST00000492883 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
CCM2-217ENST00000492883 NOB1Q9ULX3 412 aaKnown RBP17.75■□□□□ 0.43
CCM2-217ENST00000492883 PCCAP05165 728 aaPredicted RBP17.74■□□□□ 0.43
CCM2-217ENST00000492883 HSP90B1P14625 803 aaKnown RBP17.74■□□□□ 0.43
CCM2-217ENST00000492883 ALDH1B1P30837 517 aa17.74■□□□□ 0.43
CCM2-217ENST00000492883 RBM17Q96I25 401 aaKnown RBP17.74■□□□□ 0.43
CCM2-217ENST00000492883 NUP98P52948 1817 aa17.73■□□□□ 0.43
CCM2-217ENST00000492883 CRY2Q49AN0 593 aa17.73■□□□□ 0.43
CCM2-217ENST00000492883 BEND3Q5T5X7 828 aa17.73■□□□□ 0.43
CCM2-217ENST00000492883 ARHGAP27Q6ZUM4 889 aa17.73■□□□□ 0.43
CCM2-217ENST00000492883 C3orf67Q6ZVT6 689 aa17.73■□□□□ 0.43
CCM2-217ENST00000492883 AFDNP55196 1824 aaKnown RBP17.72■□□□□ 0.43
CCM2-217ENST00000492883 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
CCM2-217ENST00000492883 GCKRQ14397 625 aa17.72■□□□□ 0.43
CCM2-217ENST00000492883 ZNF219Q9P2Y4 722 aaPredicted RBP17.72■□□□□ 0.43
CCM2-217ENST00000492883 KIF13BQ9NQT8 1826 aa17.71■□□□□ 0.43
CCM2-217ENST00000492883 BCAR3O75815 825 aa17.71■□□□□ 0.43
CCM2-217ENST00000492883 PRPF40BQ6NWY9 871 aaKnown RBP17.71■□□□□ 0.43
CCM2-217ENST00000492883 SRCIN1Q9C0H9 1055 aa17.71■□□□□ 0.43
CCM2-217ENST00000492883 RIC1Q4ADV7 1423 aa17.71■□□□□ 0.43
CCM2-217ENST00000492883 H7C1W4 665 aa17.7■□□□□ 0.42
CCM2-217ENST00000492883 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
CCM2-217ENST00000492883 C21orf2O43822 256 aa17.7■□□□□ 0.42
CCM2-217ENST00000492883 PDE8AO60658 829 aa17.7■□□□□ 0.42
CCM2-217ENST00000492883 ALDH1L1O75891 902 aa17.7■□□□□ 0.42
CCM2-217ENST00000492883 HOXA10P31260 410 aaPredicted RBP17.7■□□□□ 0.42
CCM2-217ENST00000492883 DDX46Q7L014 1031 aaKnown RBP17.7■□□□□ 0.42
CCM2-217ENST00000492883 UBE3BQ7Z3V4 1068 aa17.7■□□□□ 0.42
CCM2-217ENST00000492883 FRAT1Q92837 279 aaPredicted RBP17.7■□□□□ 0.42
CCM2-217ENST00000492883 CRAMP1Q96RY5 1269 aa17.7■□□□□ 0.42
CCM2-217ENST00000492883 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
CCM2-217ENST00000492883 KIF16BQ96L93 1317 aa17.7■□□□□ 0.42
CCM2-217ENST00000492883 C9orf78Q9NZ63 289 aaPredicted RBP17.69■□□□□ 0.42
CCM2-217ENST00000492883 CDHR2Q9BYE9 1310 aa17.69■□□□□ 0.42
CCM2-217ENST00000492883 SF3B3Q15393 1217 aaKnown RBP17.68■□□□□ 0.42
CCM2-217ENST00000492883 ARHGAP45Q92619 1136 aa17.68■□□□□ 0.42
CCM2-217ENST00000492883 N4BP2Q86UW6 1770 aaPredicted RBP17.68■□□□□ 0.42
CCM2-217ENST00000492883 ARFGEF2Q9Y6D5 1785 aa17.67■□□□□ 0.42
CCM2-217ENST00000492883 GRM8O00222 908 aa17.66■□□□□ 0.42
CCM2-217ENST00000492883 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
CCM2-217ENST00000492883 SOGA3Q5TF21 947 aa17.66■□□□□ 0.42
CCM2-217ENST00000492883 CCDC85AQ96PX6 553 aaPredicted RBP17.66■□□□□ 0.42
CCM2-217ENST00000492883 TMX4Q9H1E5 349 aaPredicted RBP17.66■□□□□ 0.42
CCM2-217ENST00000492883 KIAA1551Q9HCM1 1747 aa17.66■□□□□ 0.42
CCM2-217ENST00000492883 PPEF1O14829 653 aaPredicted RBP17.65■□□□□ 0.42
CCM2-217ENST00000492883 BBOX1O75936 387 aa17.65■□□□□ 0.42
CCM2-217ENST00000492883 CCT4P50991 539 aaKnown RBP17.65■□□□□ 0.42
CCM2-217ENST00000492883 CTSWP56202 376 aa17.65■□□□□ 0.42
CCM2-217ENST00000492883 ABCC4O15439 1325 aa17.65■□□□□ 0.42
CCM2-217ENST00000492883 ANKRD36CQ5JPF3 1778 aa17.64■□□□□ 0.41
CCM2-217ENST00000492883 CASP7P55210 303 aa17.64■□□□□ 0.41
CCM2-217ENST00000492883 GRAPQ13588 217 aa17.64■□□□□ 0.41
CCM2-217ENST00000492883 CCDC93Q567U6 631 aa17.64■□□□□ 0.41
CCM2-217ENST00000492883 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.41
CCM2-217ENST00000492883 ATF7IPQ6VMQ6 1270 aa17.64■□□□□ 0.41
CCM2-217ENST00000492883 GRAPLQ8TC17 118 aaPredicted RBP17.64■□□□□ 0.41
CCM2-217ENST00000492883 C7orf43Q8WVR3 580 aa17.64■□□□□ 0.41
CCM2-217ENST00000492883 ANKRD31Q8N7Z5 1873 aa17.64■□□□□ 0.41
CCM2-217ENST00000492883 TTLL11Q8NHH1 800 aa17.63■□□□□ 0.41
CCM2-217ENST00000492883 PLA2G12BQ9BX93 195 aa17.63■□□□□ 0.41
CCM2-217ENST00000492883 TRIM27P14373 513 aa17.62■□□□□ 0.41
CCM2-217ENST00000492883 YY1P25490 414 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms